EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006806 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 27516 bases
Position: chrGeneScaffold_2023:119761-147276
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006342	MRP-S27	PF10037.9	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006783	PTCD2-201	942	-	ENSPCAP00000006342	314 (aa)	-	UPI00018AFF1C

Gene Model

Click here to download ENSPCAG00000006806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006806	PTCD2	99	67.628	ENSG00000049883	PTCD2	73	81.203	Homo_sapiens
ENSPCAG00000006806	PTCD2	87	43.796	ENSAPOG00000020682	ptcd2	72	43.796	Acanthochromis_polyacanthus
ENSPCAG00000006806	PTCD2	99	66.559	ENSAMEG00000007194	PTCD2	80	66.559	Ailuropoda_melanoleuca
ENSPCAG00000006806	PTCD2	62	48.000	ENSACIG00000002053	ptcd2	62	48.000	Amphilophus_citrinellus
ENSPCAG00000006806	PTCD2	87	43.431	ENSAOCG00000006616	ptcd2	71	43.431	Amphiprion_ocellaris
ENSPCAG00000006806	PTCD2	87	43.796	ENSAPEG00000022926	ptcd2	71	43.796	Amphiprion_percula
ENSPCAG00000006806	PTCD2	99	47.452	ENSACAG00000009747	PTCD2	80	47.452	Anolis_carolinensis
ENSPCAG00000006806	PTCD2	99	67.628	ENSANAG00000029353	PTCD2	80	67.628	Aotus_nancymaae
ENSPCAG00000006806	PTCD2	87	41.971	ENSACLG00000027742	ptcd2	71	41.971	Astatotilapia_calliptera
ENSPCAG00000006806	PTCD2	89	40.569	ENSAMXG00000029404	ptcd2	75	40.569	Astyanax_mexicanus
ENSPCAG00000006806	PTCD2	98	66.129	ENSBTAG00000014675	PTCD2	81	66.129	Bos_taurus
ENSPCAG00000006806	PTCD2	99	66.667	ENSCJAG00000016364	PTCD2	80	66.667	Callithrix_jacchus
ENSPCAG00000006806	PTCD2	99	67.203	ENSCAFG00000007982	PTCD2	73	67.203	Canis_familiaris
ENSPCAG00000006806	PTCD2	87	69.485	ENSCAFG00020019147	PTCD2	76	69.485	Canis_lupus_dingo
ENSPCAG00000006806	PTCD2	98	67.742	ENSCHIG00000017118	PTCD2	81	67.742	Capra_hircus
ENSPCAG00000006806	PTCD2	98	64.725	ENSCPOG00000040168	PTCD2	81	64.725	Cavia_porcellus
ENSPCAG00000006806	PTCD2	99	62.058	ENSCCAG00000021996	-	95	62.338	Cebus_capucinus
ENSPCAG00000006806	PTCD2	99	66.346	ENSCCAG00000029389	-	80	66.346	Cebus_capucinus
ENSPCAG00000006806	PTCD2	98	64.401	ENSCATG00000019069	PTCD2	81	64.401	Cercocebus_atys
ENSPCAG00000006806	PTCD2	98	62.783	ENSCLAG00000000072	PTCD2	81	62.783	Chinchilla_lanigera
ENSPCAG00000006806	PTCD2	98	66.343	ENSCSAG00000015623	PTCD2	81	66.343	Chlorocebus_sabaeus
ENSPCAG00000006806	PTCD2	86	51.825	ENSCHOG00000010634	PTCD2	79	51.825	Choloepus_hoffmanni
ENSPCAG00000006806	PTCD2	99	48.408	ENSCPBG00000000216	PTCD2	85	48.408	Chrysemys_picta_bellii
ENSPCAG00000006806	PTCD2	99	65.385	ENSCANG00000035636	PTCD2	80	65.385	Colobus_angolensis_palliatus
ENSPCAG00000006806	PTCD2	93	63.014	ENSCGRG00001015289	Ptcd2	64	63.014	Cricetulus_griseus_chok1gshd
ENSPCAG00000006806	PTCD2	93	63.014	ENSCGRG00000006193	Ptcd2	64	63.014	Cricetulus_griseus_crigri
ENSPCAG00000006806	PTCD2	87	43.066	ENSCVAG00000001285	ptcd2	70	43.066	Cyprinodon_variegatus
ENSPCAG00000006806	PTCD2	91	43.007	ENSDARG00000035391	ptcd2	75	43.007	Danio_rerio
ENSPCAG00000006806	PTCD2	98	66.667	ENSDNOG00000008719	PTCD2	81	66.667	Dasypus_novemcinctus
ENSPCAG00000006806	PTCD2	90	66.319	ENSDORG00000004921	Ptcd2	74	66.319	Dipodomys_ordii
ENSPCAG00000006806	PTCD2	100	58.730	ENSETEG00000016542	PTCD2	81	58.730	Echinops_telfairi
ENSPCAG00000006806	PTCD2	94	68.367	ENSEASG00005018038	PTCD2	77	68.367	Equus_asinus_asinus
ENSPCAG00000006806	PTCD2	99	66.667	ENSECAG00000007022	PTCD2	80	66.667	Equus_caballus
ENSPCAG00000006806	PTCD2	99	60.645	ENSEEUG00000014031	PTCD2	80	60.645	Erinaceus_europaeus
ENSPCAG00000006806	PTCD2	89	45.907	ENSELUG00000003584	ptcd2	73	45.907	Esox_lucius
ENSPCAG00000006806	PTCD2	100	60.366	ENSFCAG00000045432	PTCD2	66	60.366	Felis_catus
ENSPCAG00000006806	PTCD2	63	56.853	ENSFALG00000010299	PTCD2	60	56.853	Ficedula_albicollis
ENSPCAG00000006806	PTCD2	100	64.013	ENSFDAG00000018461	PTCD2	80	64.013	Fukomys_damarensis
ENSPCAG00000006806	PTCD2	87	46.209	ENSGMOG00000003637	ptcd2	72	46.209	Gadus_morhua
ENSPCAG00000006806	PTCD2	89	46.237	ENSGALG00000038260	PTCD2	80	43.506	Gallus_gallus
ENSPCAG00000006806	PTCD2	99	50.949	ENSGAGG00000021952	PTCD2	80	50.949	Gopherus_agassizii
ENSPCAG00000006806	PTCD2	99	67.949	ENSGGOG00000010695	PTCD2	80	67.949	Gorilla_gorilla
ENSPCAG00000006806	PTCD2	87	41.606	ENSHBUG00000009191	ptcd2	71	41.606	Haplochromis_burtoni
ENSPCAG00000006806	PTCD2	98	64.856	ENSHGLG00000001234	PTCD2	81	64.856	Heterocephalus_glaber_female
ENSPCAG00000006806	PTCD2	98	65.176	ENSHGLG00100015419	PTCD2	81	65.176	Heterocephalus_glaber_male
ENSPCAG00000006806	PTCD2	94	43.771	ENSHCOG00000001703	ptcd2	75	43.771	Hippocampus_comes
ENSPCAG00000006806	PTCD2	89	38.929	ENSIPUG00000006080	ptcd2	73	38.929	Ictalurus_punctatus
ENSPCAG00000006806	PTCD2	98	66.124	ENSSTOG00000006596	PTCD2	80	66.124	Ictidomys_tridecemlineatus
ENSPCAG00000006806	PTCD2	98	63.430	ENSJJAG00000024388	Ptcd2	81	63.430	Jaculus_jaculus
ENSPCAG00000006806	PTCD2	88	41.071	ENSKMAG00000009329	ptcd2	73	41.071	Kryptolebias_marmoratus
ENSPCAG00000006806	PTCD2	87	42.647	ENSLBEG00000024871	ptcd2	70	42.647	Labrus_bergylta
ENSPCAG00000006806	PTCD2	89	50.000	ENSLOCG00000011122	ptcd2	73	50.000	Lepisosteus_oculatus
ENSPCAG00000006806	PTCD2	98	70.874	ENSLAFG00000004115	PTCD2	99	70.874	Loxodonta_africana
ENSPCAG00000006806	PTCD2	99	64.423	ENSMFAG00000031516	PTCD2	80	64.423	Macaca_fascicularis
ENSPCAG00000006806	PTCD2	98	65.049	ENSMNEG00000007537	PTCD2	81	65.049	Macaca_nemestrina
ENSPCAG00000006806	PTCD2	99	64.423	ENSMLEG00000031093	PTCD2	80	64.423	Mandrillus_leucophaeus
ENSPCAG00000006806	PTCD2	87	45.255	ENSMAMG00000018529	ptcd2	72	45.255	Mastacembelus_armatus
ENSPCAG00000006806	PTCD2	87	41.971	ENSMZEG00005003625	ptcd2	71	41.971	Maylandia_zebra
ENSPCAG00000006806	PTCD2	87	45.985	ENSMGAG00000005033	PTCD2	79	45.985	Meleagris_gallopavo
ENSPCAG00000006806	PTCD2	93	58.639	ENSMAUG00000020253	Ptcd2	72	58.639	Mesocricetus_auratus
ENSPCAG00000006806	PTCD2	99	65.806	ENSMICG00000004535	PTCD2	80	65.806	Microcebus_murinus
ENSPCAG00000006806	PTCD2	92	62.847	ENSMOCG00000019985	Ptcd2	76	62.847	Microtus_ochrogaster
ENSPCAG00000006806	PTCD2	89	53.763	ENSMODG00000001695	PTCD2	73	53.763	Monodelphis_domestica
ENSPCAG00000006806	PTCD2	87	45.255	ENSMALG00000022372	ptcd2	72	45.255	Monopterus_albus
ENSPCAG00000006806	PTCD2	96	62.667	MGP_CAROLIEiJ_G0018829	Ptcd2	78	62.667	Mus_caroli
ENSPCAG00000006806	PTCD2	96	61.000	ENSMUSG00000021650	Ptcd2	78	61.000	Mus_musculus
ENSPCAG00000006806	PTCD2	92	64.931	MGP_PahariEiJ_G0015904	Ptcd2	76	64.931	Mus_pahari
ENSPCAG00000006806	PTCD2	96	61.667	MGP_SPRETEiJ_G0019711	Ptcd2	78	61.667	Mus_spretus
ENSPCAG00000006806	PTCD2	98	66.343	ENSMPUG00000014401	PTCD2	81	66.343	Mustela_putorius_furo
ENSPCAG00000006806	PTCD2	100	64.331	ENSMLUG00000007374	PTCD2	81	64.331	Myotis_lucifugus
ENSPCAG00000006806	PTCD2	98	61.165	ENSNGAG00000005027	Ptcd2	81	61.165	Nannospalax_galili
ENSPCAG00000006806	PTCD2	87	41.971	ENSNBRG00000008174	ptcd2	72	41.971	Neolamprologus_brichardi
ENSPCAG00000006806	PTCD2	63	50.254	ENSNBRG00000000092	-	62	50.254	Neolamprologus_brichardi
ENSPCAG00000006806	PTCD2	99	67.308	ENSNLEG00000004516	PTCD2	80	67.308	Nomascus_leucogenys
ENSPCAG00000006806	PTCD2	99	61.587	ENSOPRG00000007290	PTCD2	81	61.587	Ochotona_princeps
ENSPCAG00000006806	PTCD2	98	65.372	ENSODEG00000016417	PTCD2	81	65.372	Octodon_degus
ENSPCAG00000006806	PTCD2	87	41.971	ENSONIG00000011269	ptcd2	80	41.971	Oreochromis_niloticus
ENSPCAG00000006806	PTCD2	92	64.828	ENSOCUG00000007970	PTCD2	81	62.460	Oryctolagus_cuniculus
ENSPCAG00000006806	PTCD2	87	43.750	ENSORLG00000003851	ptcd2	70	43.750	Oryzias_latipes
ENSPCAG00000006806	PTCD2	86	43.542	ENSORLG00020009823	ptcd2	71	43.542	Oryzias_latipes_hni
ENSPCAG00000006806	PTCD2	87	42.647	ENSORLG00015016777	ptcd2	77	42.647	Oryzias_latipes_hsok
ENSPCAG00000006806	PTCD2	87	43.015	ENSOMEG00000012396	ptcd2	66	43.015	Oryzias_melastigma
ENSPCAG00000006806	PTCD2	99	62.500	ENSOGAG00000008390	PTCD2	80	62.500	Otolemur_garnettii
ENSPCAG00000006806	PTCD2	100	66.349	ENSOARG00000005087	PTCD2	81	66.349	Ovis_aries
ENSPCAG00000006806	PTCD2	99	67.949	ENSPPAG00000028480	PTCD2	80	67.949	Pan_paniscus
ENSPCAG00000006806	PTCD2	99	67.308	ENSPTRG00000016968	PTCD2	80	67.308	Pan_troglodytes
ENSPCAG00000006806	PTCD2	86	67.159	ENSPANG00000006611	PTCD2	70	67.159	Papio_anubis
ENSPCAG00000006806	PTCD2	89	45.196	ENSPKIG00000019896	ptcd2	73	45.196	Paramormyrops_kingsleyae
ENSPCAG00000006806	PTCD2	90	53.521	ENSPSIG00000014559	PTCD2	88	53.521	Pelodiscus_sinensis
ENSPCAG00000006806	PTCD2	92	62.153	ENSPEMG00000000884	Ptcd2	75	62.153	Peromyscus_maniculatus_bairdii
ENSPCAG00000006806	PTCD2	90	55.282	ENSPCIG00000029047	PTCD2	74	55.282	Phascolarctos_cinereus
ENSPCAG00000006806	PTCD2	92	40.484	ENSPLAG00000010456	ptcd2	75	40.484	Poecilia_latipinna
ENSPCAG00000006806	PTCD2	92	40.830	ENSPREG00000021797	ptcd2	73	40.830	Poecilia_reticulata
ENSPCAG00000006806	PTCD2	99	66.667	ENSPPYG00000015543	PTCD2	78	66.667	Pongo_abelii
ENSPCAG00000006806	PTCD2	100	66.561	ENSPVAG00000010935	PTCD2	81	66.561	Pteropus_vampyrus
ENSPCAG00000006806	PTCD2	87	41.971	ENSPNYG00000003122	ptcd2	71	41.971	Pundamilia_nyererei
ENSPCAG00000006806	PTCD2	89	42.705	ENSPNAG00000021490	ptcd2	73	42.705	Pygocentrus_nattereri
ENSPCAG00000006806	PTCD2	96	64.333	ENSRNOG00000028403	Ptcd2	78	64.333	Rattus_norvegicus
ENSPCAG00000006806	PTCD2	99	58.654	ENSRBIG00000032929	PTCD2	79	58.654	Rhinopithecus_bieti
ENSPCAG00000006806	PTCD2	98	65.049	ENSRROG00000000080	PTCD2	81	65.049	Rhinopithecus_roxellana
ENSPCAG00000006806	PTCD2	98	66.667	ENSSBOG00000018911	PTCD2	81	66.667	Saimiri_boliviensis_boliviensis
ENSPCAG00000006806	PTCD2	98	52.581	ENSSHAG00000003833	PTCD2	80	52.581	Sarcophilus_harrisii
ENSPCAG00000006806	PTCD2	99	42.949	ENSSFOG00015015415	ptcd2	80	42.949	Scleropages_formosus
ENSPCAG00000006806	PTCD2	91	40.351	ENSSMAG00000010350	ptcd2	73	40.351	Scophthalmus_maximus
ENSPCAG00000006806	PTCD2	87	44.322	ENSSDUG00000008142	ptcd2	68	44.322	Seriola_dumerili
ENSPCAG00000006806	PTCD2	87	44.322	ENSSLDG00000015284	ptcd2	72	44.322	Seriola_lalandi_dorsalis
ENSPCAG00000006806	PTCD2	99	55.806	ENSSARG00000004983	PTCD2	99	55.806	Sorex_araneus
ENSPCAG00000006806	PTCD2	89	48.929	ENSSPUG00000000176	PTCD2	72	48.929	Sphenodon_punctatus
ENSPCAG00000006806	PTCD2	87	43.431	ENSSPAG00000008591	ptcd2	71	43.431	Stegastes_partitus
ENSPCAG00000006806	PTCD2	100	68.153	ENSSSCG00000016975	PTCD2	65	82.234	Sus_scrofa
ENSPCAG00000006806	PTCD2	87	46.154	ENSTGUG00000005705	PTCD2	79	46.154	Taeniopygia_guttata
ENSPCAG00000006806	PTCD2	95	64.765	ENSTBEG00000016559	PTCD2	77	64.765	Tupaia_belangeri
ENSPCAG00000006806	PTCD2	99	66.134	ENSTTRG00000011851	PTCD2	81	66.134	Tursiops_truncatus
ENSPCAG00000006806	PTCD2	99	66.238	ENSUAMG00000007583	PTCD2	73	66.238	Ursus_americanus
ENSPCAG00000006806	PTCD2	98	65.696	ENSUMAG00000007666	PTCD2	81	65.696	Ursus_maritimus
ENSPCAG00000006806	PTCD2	100	66.349	ENSVPAG00000009597	PTCD2	81	66.349	Vicugna_pacos
ENSPCAG00000006806	PTCD2	98	66.343	ENSVVUG00000007299	-	81	66.343	Vulpes_vulpes
ENSPCAG00000006806	PTCD2	94	45.066	ENSXETG00000031652	PTCD2	80	45.066	Xenopus_tropicalis
ENSPCAG00000006806	PTCD2	92	41.176	ENSXMAG00000005940	ptcd2	68	41.176	Xiphophorus_maculatus