EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006946 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 12935 bases
Position: chrGeneScaffold_7418:42633-55567
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006562	Anticodon_1	PF08264.13	3.5e-08	1	1
ENSPCAP00000006562	tRNA-synt_1	PF00133.22	9.5e-117	1	2
ENSPCAP00000006562	tRNA-synt_1	PF00133.22	9.5e-117	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000007015	VARS2-201	3180	-	ENSPCAP00000006562	1059 (aa)	-	UPI00018AF3E6

Gene Model

Click here to download ENSPCAG00000006946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006946	VARS2	63	54.167	ENSAPOG00000007396	vars2	64	54.167	Acanthochromis_polyacanthus
ENSPCAG00000006946	VARS2	83	82.099	ENSAMEG00000012997	VARS2	81	82.099	Ailuropoda_melanoleuca
ENSPCAG00000006946	VARS2	64	55.426	ENSACIG00000004344	vars2	63	55.426	Amphilophus_citrinellus
ENSPCAG00000006946	VARS2	63	53.667	ENSAOCG00000000476	vars2	64	53.667	Amphiprion_ocellaris
ENSPCAG00000006946	VARS2	78	53.500	ENSAPEG00000008646	vars2	62	53.500	Amphiprion_percula
ENSPCAG00000006946	VARS2	75	56.000	ENSATEG00000012291	vars2	64	54.833	Anabas_testudineus
ENSPCAG00000006946	VARS2	78	60.714	ENSACAG00000022093	VARS2	78	60.714	Anolis_carolinensis
ENSPCAG00000006946	VARS2	84	82.036	ENSANAG00000038018	VARS2	84	82.036	Aotus_nancymaae
ENSPCAG00000006946	VARS2	78	54.833	ENSACLG00000018673	vars2	63	54.833	Astatotilapia_calliptera
ENSPCAG00000006946	VARS2	79	55.907	ENSAMXG00000017773	vars2	66	55.907	Astyanax_mexicanus
ENSPCAG00000006946	VARS2	84	82.822	ENSBTAG00000010698	VARS2	84	82.400	Bos_taurus
ENSPCAG00000006946	VARS2	84	80.723	ENSCJAG00000019826	VARS2	84	80.723	Callithrix_jacchus
ENSPCAG00000006946	VARS2	84	79.633	ENSCAFG00000000454	VARS2	84	79.633	Canis_familiaris
ENSPCAG00000006946	VARS2	72	85.294	ENSCAFG00020019387	VARS2	77	86.486	Canis_lupus_dingo
ENSPCAG00000006946	VARS2	83	83.951	ENSCHIG00000007847	VARS2	84	83.200	Capra_hircus
ENSPCAG00000006946	VARS2	84	81.977	ENSTSYG00000009904	VARS2	84	81.977	Carlito_syrichta
ENSPCAG00000006946	VARS2	72	76.461	ENSCAPG00000017770	VARS2	82	76.461	Cavia_aperea
ENSPCAG00000006946	VARS2	84	76.294	ENSCPOG00000021834	VARS2	84	76.294	Cavia_porcellus
ENSPCAG00000006946	VARS2	84	80.838	ENSCCAG00000037907	VARS2	84	80.838	Cebus_capucinus
ENSPCAG00000006946	VARS2	84	83.832	ENSCATG00000032554	VARS2	84	83.832	Cercocebus_atys
ENSPCAG00000006946	VARS2	84	76.795	ENSCLAG00000002889	VARS2	84	76.795	Chinchilla_lanigera
ENSPCAG00000006946	VARS2	84	83.234	ENSCSAG00000008327	VARS2	84	83.234	Chlorocebus_sabaeus
ENSPCAG00000006946	VARS2	75	69.231	ENSCPBG00000021502	VARS2	79	69.231	Chrysemys_picta_bellii
ENSPCAG00000006946	VARS2	84	83.832	ENSCANG00000014991	VARS2	83	83.832	Colobus_angolensis_palliatus
ENSPCAG00000006946	VARS2	83	78.297	ENSCGRG00001021535	Vars2	84	78.297	Cricetulus_griseus_chok1gshd
ENSPCAG00000006946	VARS2	83	78.297	ENSCGRG00000014112	Vars2	84	78.297	Cricetulus_griseus_crigri
ENSPCAG00000006946	VARS2	80	55.426	ENSDARG00000056717	vars2	80	55.426	Danio_rerio
ENSPCAG00000006946	VARS2	72	78.738	ENSDORG00000008516	Vars2	85	78.738	Dipodomys_ordii
ENSPCAG00000006946	VARS2	84	79.878	ENSETEG00000014844	VARS2	83	79.878	Echinops_telfairi
ENSPCAG00000006946	VARS2	84	85.030	ENSEASG00005019997	VARS2	79	91.892	Equus_asinus_asinus
ENSPCAG00000006946	VARS2	84	85.030	ENSECAG00000018202	VARS2	84	85.030	Equus_caballus
ENSPCAG00000006946	VARS2	56	81.553	ENSEEUG00000012591	-	51	81.553	Erinaceus_europaeus
ENSPCAG00000006946	VARS2	63	54.500	ENSELUG00000017824	vars2	63	54.500	Esox_lucius
ENSPCAG00000006946	VARS2	84	82.036	ENSFCAG00000010531	VARS2	84	82.036	Felis_catus
ENSPCAG00000006946	VARS2	84	78.571	ENSFDAG00000017216	VARS2	84	78.571	Fukomys_damarensis
ENSPCAG00000006946	VARS2	63	54.228	ENSFHEG00000013932	vars2	64	54.228	Fundulus_heteroclitus
ENSPCAG00000006946	VARS2	61	54.424	ENSGMOG00000018960	vars2	68	54.424	Gadus_morhua
ENSPCAG00000006946	VARS2	57	61.290	ENSGAFG00000004737	vars2	65	61.290	Gambusia_affinis
ENSPCAG00000006946	VARS2	61	55.426	ENSGACG00000001464	vars2	66	55.426	Gasterosteus_aculeatus
ENSPCAG00000006946	VARS2	74	71.429	ENSGAGG00000011652	VARS2	81	77.419	Gopherus_agassizii
ENSPCAG00000006946	VARS2	84	82.635	ENSGGOG00000014587	VARS2	84	82.635	Gorilla_gorilla
ENSPCAG00000006946	VARS2	73	60.000	ENSHBUG00000002448	vars2	60	60.000	Haplochromis_burtoni
ENSPCAG00000006946	VARS2	84	78.443	ENSHGLG00000012886	VARS2	81	78.443	Heterocephalus_glaber_female
ENSPCAG00000006946	VARS2	84	78.443	ENSHGLG00100016535	VARS2	84	78.443	Heterocephalus_glaber_male
ENSPCAG00000006946	VARS2	76	54.833	ENSIPUG00000015573	Vars2	63	54.833	Ictalurus_punctatus
ENSPCAG00000006946	VARS2	84	80.634	ENSSTOG00000009924	VARS2	84	80.634	Ictidomys_tridecemlineatus
ENSPCAG00000006946	VARS2	84	76.461	ENSJJAG00000011144	Vars2	83	76.461	Jaculus_jaculus
ENSPCAG00000006946	VARS2	63	54.167	ENSKMAG00000001393	vars2	64	54.167	Kryptolebias_marmoratus
ENSPCAG00000006946	VARS2	78	55.408	ENSLBEG00000011949	vars2	63	55.408	Labrus_bergylta
ENSPCAG00000006946	VARS2	79	53.377	ENSLACG00000001576	-	82	53.377	Latimeria_chalumnae
ENSPCAG00000006946	VARS2	84	85.890	ENSLAFG00000015183	VARS2	84	85.890	Loxodonta_africana
ENSPCAG00000006946	VARS2	84	83.234	ENSMFAG00000042367	VARS2	84	83.234	Macaca_fascicularis
ENSPCAG00000006946	VARS2	84	83.234	ENSMMUG00000018609	VARS2	84	83.234	Macaca_mulatta
ENSPCAG00000006946	VARS2	84	83.234	ENSMNEG00000043163	VARS2	84	83.234	Macaca_nemestrina
ENSPCAG00000006946	VARS2	84	83.832	ENSMLEG00000041728	VARS2	81	83.832	Mandrillus_leucophaeus
ENSPCAG00000006946	VARS2	78	52.833	ENSMAMG00000020339	vars2	63	52.833	Mastacembelus_armatus
ENSPCAG00000006946	VARS2	78	54.667	ENSMZEG00005017669	vars2	63	54.667	Maylandia_zebra
ENSPCAG00000006946	VARS2	84	77.796	ENSMAUG00000018946	Vars2	84	77.796	Mesocricetus_auratus
ENSPCAG00000006946	VARS2	68	80.134	ENSMICG00000005365	VARS2	81	80.134	Microcebus_murinus
ENSPCAG00000006946	VARS2	84	78.464	ENSMOCG00000014607	Vars2	90	78.464	Microtus_ochrogaster
ENSPCAG00000006946	VARS2	61	53.333	ENSMMOG00000012122	vars2	65	53.333	Mola_mola
ENSPCAG00000006946	VARS2	83	73.167	ENSMODG00000015848	VARS2	82	73.167	Monodelphis_domestica
ENSPCAG00000006946	VARS2	75	61.290	ENSMALG00000009217	vars2	80	53.000	Monopterus_albus
ENSPCAG00000006946	VARS2	84	77.462	MGP_CAROLIEiJ_G0021529	Vars2	93	71.859	Mus_caroli
ENSPCAG00000006946	VARS2	84	77.129	ENSMUSG00000038838	Vars2	93	71.357	Mus_musculus
ENSPCAG00000006946	VARS2	84	77.462	MGP_PahariEiJ_G0020523	Vars2	93	71.859	Mus_pahari
ENSPCAG00000006946	VARS2	84	77.600	MGP_SPRETEiJ_G0022436	Vars2	93	72.362	Mus_spretus
ENSPCAG00000006946	VARS2	84	81.437	ENSMPUG00000011643	VARS2	84	81.437	Mustela_putorius_furo
ENSPCAG00000006946	VARS2	84	80.000	ENSMLUG00000002356	VARS2	81	80.000	Myotis_lucifugus
ENSPCAG00000006946	VARS2	79	74.074	ENSNGAG00000020607	Vars2	82	74.074	Nannospalax_galili
ENSPCAG00000006946	VARS2	84	76.578	ENSNLEG00000005625	VARS2	81	76.578	Nomascus_leucogenys
ENSPCAG00000006946	VARS2	63	72.421	ENSMEUG00000014475	VARS2	72	72.421	Notamacropus_eugenii
ENSPCAG00000006946	VARS2	71	76.506	ENSOPRG00000000682	VARS2	71	76.506	Ochotona_princeps
ENSPCAG00000006946	VARS2	84	77.129	ENSODEG00000017965	VARS2	84	77.129	Octodon_degus
ENSPCAG00000006946	VARS2	66	61.101	ENSOANG00000000398	-	86	61.101	Ornithorhynchus_anatinus
ENSPCAG00000006946	VARS2	84	78.916	ENSOCUG00000021496	VARS2	54	78.916	Oryctolagus_cuniculus
ENSPCAG00000006946	VARS2	76	53.833	ENSORLG00000010632	vars2	63	53.833	Oryzias_latipes
ENSPCAG00000006946	VARS2	76	53.833	ENSORLG00020018584	vars2	63	53.833	Oryzias_latipes_hni
ENSPCAG00000006946	VARS2	76	53.667	ENSORLG00015010408	vars2	63	53.667	Oryzias_latipes_hsok
ENSPCAG00000006946	VARS2	77	53.833	ENSOMEG00000008360	vars2	64	53.833	Oryzias_melastigma
ENSPCAG00000006946	VARS2	84	80.467	ENSOGAG00000006087	VARS2	81	80.467	Otolemur_garnettii
ENSPCAG00000006946	VARS2	83	83.333	ENSOARG00000010844	VARS2	83	82.400	Ovis_aries
ENSPCAG00000006946	VARS2	84	82.635	ENSPPAG00000041141	VARS2	84	82.635	Pan_paniscus
ENSPCAG00000006946	VARS2	84	80.968	ENSPPRG00000006751	VARS2	82	80.968	Panthera_pardus
ENSPCAG00000006946	VARS2	84	80.838	ENSPTIG00000017799	VARS2	81	83.051	Panthera_tigris_altaica
ENSPCAG00000006946	VARS2	84	82.635	ENSPTRG00000034497	VARS2	84	82.635	Pan_troglodytes
ENSPCAG00000006946	VARS2	84	83.832	ENSPANG00000018481	VARS2	84	84.397	Papio_anubis
ENSPCAG00000006946	VARS2	78	55.500	ENSPKIG00000011372	vars2	79	55.500	Paramormyrops_kingsleyae
ENSPCAG00000006946	VARS2	54	60.035	ENSPSIG00000006206	VARS2	85	59.496	Pelodiscus_sinensis
ENSPCAG00000006946	VARS2	81	54.257	ENSPMGG00000000465	vars2	80	54.257	Periophthalmus_magnuspinnatus
ENSPCAG00000006946	VARS2	84	78.464	ENSPEMG00000014691	Vars2	84	78.464	Peromyscus_maniculatus_bairdii
ENSPCAG00000006946	VARS2	77	85.075	ENSPCIG00000015040	VARS2	82	85.075	Phascolarctos_cinereus
ENSPCAG00000006946	VARS2	61	54.077	ENSPFOG00000017616	vars2	63	54.077	Poecilia_formosa
ENSPCAG00000006946	VARS2	68	53.923	ENSPLAG00000019778	vars2	63	53.923	Poecilia_latipinna
ENSPCAG00000006946	VARS2	61	54.090	ENSPMEG00000011123	vars2	63	54.090	Poecilia_mexicana
ENSPCAG00000006946	VARS2	59	52.724	ENSPREG00000014998	vars2	61	52.724	Poecilia_reticulata
ENSPCAG00000006946	VARS2	84	81.977	ENSPPYG00000016424	VARS2	84	81.977	Pongo_abelii
ENSPCAG00000006946	VARS2	84	86.228	ENSPCOG00000014839	VARS2	82	86.228	Propithecus_coquereli
ENSPCAG00000006946	VARS2	84	79.651	ENSPVAG00000004197	VARS2	84	79.651	Pteropus_vampyrus
ENSPCAG00000006946	VARS2	66	62.182	ENSPNYG00000010314	vars2	60	62.182	Pundamilia_nyererei
ENSPCAG00000006946	VARS2	78	55.814	ENSPNAG00000026793	vars2	62	55.814	Pygocentrus_nattereri
ENSPCAG00000006946	VARS2	84	77.629	ENSRNOG00000000833	Vars2	83	77.629	Rattus_norvegicus
ENSPCAG00000006946	VARS2	84	83.832	ENSRBIG00000032725	VARS2	84	83.832	Rhinopithecus_bieti
ENSPCAG00000006946	VARS2	84	83.832	ENSRROG00000043847	VARS2	84	83.832	Rhinopithecus_roxellana
ENSPCAG00000006946	VARS2	84	79.042	ENSSBOG00000033240	VARS2	82	79.042	Saimiri_boliviensis_boliviensis
ENSPCAG00000006946	VARS2	83	73.913	ENSSHAG00000009307	VARS2	84	73.957	Sarcophilus_harrisii
ENSPCAG00000006946	VARS2	66	55.500	ENSSFOG00015016187	vars2	65	55.500	Scleropages_formosus
ENSPCAG00000006946	VARS2	56	73.134	ENSSMAG00000020842	vars2	61	73.134	Scophthalmus_maximus
ENSPCAG00000006946	VARS2	77	54.667	ENSSDUG00000011598	vars2	64	54.667	Seriola_dumerili
ENSPCAG00000006946	VARS2	73	64.516	ENSSLDG00000015492	vars2	64	55.000	Seriola_lalandi_dorsalis
ENSPCAG00000006946	VARS2	73	71.429	ENSSPUG00000014700	VARS2	77	71.429	Sphenodon_punctatus
ENSPCAG00000006946	VARS2	59	61.290	ENSSPAG00000004654	vars2	59	61.290	Stegastes_partitus
ENSPCAG00000006946	VARS2	84	82.137	ENSSSCG00000001384	VARS2	83	85.714	Sus_scrofa
ENSPCAG00000006946	VARS2	63	55.167	ENSTRUG00000005264	vars2	66	55.167	Takifugu_rubripes
ENSPCAG00000006946	VARS2	65	54.063	ENSTNIG00000005916	vars2	64	54.063	Tetraodon_nigroviridis
ENSPCAG00000006946	VARS2	77	81.600	ENSTTRG00000012243	VARS2	76	81.600	Tursiops_truncatus
ENSPCAG00000006946	VARS2	84	79.800	ENSUAMG00000026124	VARS2	77	86.957	Ursus_americanus
ENSPCAG00000006946	VARS2	84	80.240	ENSUMAG00000019894	VARS2	85	79.800	Ursus_maritimus
ENSPCAG00000006946	VARS2	84	80.952	ENSVVUG00000010754	VARS2	80	80.952	Vulpes_vulpes
ENSPCAG00000006946	VARS2	72	68.000	ENSXETG00000003036	vars2	81	68.000	Xenopus_tropicalis
ENSPCAG00000006946	VARS2	62	53.500	ENSXCOG00000003455	vars2	66	53.500	Xiphophorus_couchianus
ENSPCAG00000006946	VARS2	61	53.500	ENSXMAG00000013523	vars2	64	53.500	Xiphophorus_maculatus