EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006951 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 22702 bases
Position: chrGeneScaffold_6151:103882-126583
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006560	RNA_pol_Rpb1_5	PF04998.17	4.5e-64	1	1
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	1	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	2	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	3	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	4	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	5	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	6	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	7	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	8	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	9	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	10	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	11	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	12	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	13	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	14	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	15	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	16	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	17	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	18	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	19	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	20	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	21	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	22	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	23	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	24	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	25	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	26	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	27	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	28	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	29	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	30	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	31	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	32	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	33	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	34	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	35	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	36	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	37	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	38	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	39	40
ENSPCAP00000006560	RNA_pol_Rpb1_R	PF05001.13	2.9e-27	40	40
ENSPCAP00000006560	RNA_pol_Rpb1_2	PF00623.20	1.7e-73	1	1
ENSPCAP00000006560	RNA_pol_Rpb1_3	PF04983.18	6.4e-50	1	1
ENSPCAP00000006560	RNA_pol_Rpb1_1	PF04997.12	4.2e-109	1	1
ENSPCAP00000006560	RNA_pol_Rpb1_7	PF04990.12	1.5e-54	1	1
ENSPCAP00000006560	RNA_pol_Rpb1_6	PF04992.14	6.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000007013	-	5901	-	ENSPCAP00000006560	1966 (aa)	-	UPI00018AFCA5

Gene Model

Click here to download ENSPCAG00000006951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006951	-	74	95.395	ENSAPOG00000006552	polr2a	83	95.395	Acanthochromis_polyacanthus
ENSPCAG00000006951	-	92	99.474	ENSAMEG00000016265	-	92	99.474	Ailuropoda_melanoleuca
ENSPCAG00000006951	-	74	95.132	ENSACIG00000015982	polr2a	73	95.132	Amphilophus_citrinellus
ENSPCAG00000006951	-	89	95.263	ENSAOCG00000004255	polr2a	87	95.263	Amphiprion_ocellaris
ENSPCAG00000006951	-	74	95.263	ENSAPEG00000012623	polr2a	74	95.263	Amphiprion_percula
ENSPCAG00000006951	-	74	95.526	ENSATEG00000019644	polr2a	74	95.526	Anabas_testudineus
ENSPCAG00000006951	-	92	98.000	ENSACAG00000014561	POLR2A	92	98.000	Anolis_carolinensis
ENSPCAG00000006951	-	92	99.868	ENSANAG00000020093	-	92	99.868	Aotus_nancymaae
ENSPCAG00000006951	-	74	95.000	ENSACLG00000006735	polr2a	74	95.000	Astatotilapia_calliptera
ENSPCAG00000006951	-	74	95.526	ENSAMXG00000020046	polr2a	73	95.526	Astyanax_mexicanus
ENSPCAG00000006951	-	92	99.868	ENSBTAG00000046765	POLR2A	92	99.868	Bos_taurus
ENSPCAG00000006951	-	86	71.277	WBGene00000123	ama-1	91	72.727	Caenorhabditis_elegans
ENSPCAG00000006951	-	83	99.737	ENSCAFG00000016532	POLR2A	91	99.737	Canis_familiaris
ENSPCAG00000006951	-	92	99.524	ENSCAFG00020007929	-	92	99.524	Canis_lupus_dingo
ENSPCAG00000006951	-	92	99.868	ENSCHIG00000027173	-	92	99.868	Capra_hircus
ENSPCAG00000006951	-	92	99.868	ENSTSYG00000012803	-	92	99.868	Carlito_syrichta
ENSPCAG00000006951	-	90	99.726	ENSCAPG00000001882	-	90	99.726	Cavia_aperea
ENSPCAG00000006951	-	92	99.737	ENSCPOG00000014812	-	91	99.737	Cavia_porcellus
ENSPCAG00000006951	-	92	99.868	ENSCCAG00000020938	-	92	99.868	Cebus_capucinus
ENSPCAG00000006951	-	92	99.737	ENSCATG00000013680	-	92	99.737	Cercocebus_atys
ENSPCAG00000006951	-	92	99.868	ENSCLAG00000012196	-	92	99.868	Chinchilla_lanigera
ENSPCAG00000006951	-	74	99.606	ENSCSAG00000011644	-	74	99.606	Chlorocebus_sabaeus
ENSPCAG00000006951	-	92	97.763	ENSCPBG00000012697	POLR2A	92	97.763	Chrysemys_picta_bellii
ENSPCAG00000006951	-	91	78.723	ENSCING00000007884	-	91	78.723	Ciona_intestinalis
ENSPCAG00000006951	-	87	83.333	ENSCSAVG00000008334	-	91	83.871	Ciona_savignyi
ENSPCAG00000006951	-	92	99.737	ENSCANG00000010622	-	92	99.737	Colobus_angolensis_palliatus
ENSPCAG00000006951	-	74	99.868	ENSCGRG00001003538	Polr2a	75	99.868	Cricetulus_griseus_chok1gshd
ENSPCAG00000006951	-	74	99.868	ENSCGRG00000012105	Polr2a	86	99.868	Cricetulus_griseus_crigri
ENSPCAG00000006951	-	74	95.132	ENSCSEG00000002635	polr2a	74	95.132	Cynoglossus_semilaevis
ENSPCAG00000006951	-	74	94.868	ENSCVAG00000005156	polr2a	74	94.868	Cyprinodon_variegatus
ENSPCAG00000006951	-	74	95.000	ENSDARG00000099966	polr2a	74	95.000	Danio_rerio
ENSPCAG00000006951	-	92	99.605	ENSDNOG00000016482	-	92	99.605	Dasypus_novemcinctus
ENSPCAG00000006951	-	92	99.868	ENSDORG00000008667	Polr2a	92	99.868	Dipodomys_ordii
ENSPCAG00000006951	-	91	78.296	FBgn0003277	RpII215	91	78.296	Drosophila_melanogaster
ENSPCAG00000006951	-	86	99.683	ENSETEG00000002540	-	79	99.683	Echinops_telfairi
ENSPCAG00000006951	-	73	88.889	ENSEBUG00000013967	polr2a	73	88.889	Eptatretus_burgeri
ENSPCAG00000006951	-	92	97.048	ENSEASG00005019114	-	92	97.238	Equus_asinus_asinus
ENSPCAG00000006951	-	92	99.868	ENSECAG00000018485	POLR2A	92	99.868	Equus_caballus
ENSPCAG00000006951	-	79	99.606	ENSEEUG00000001154	-	85	99.606	Erinaceus_europaeus
ENSPCAG00000006951	-	81	93.561	ENSELUG00000014284	polr2a	75	93.561	Esox_lucius
ENSPCAG00000006951	-	92	99.737	ENSFDAG00000008287	-	92	99.737	Fukomys_damarensis
ENSPCAG00000006951	-	77	94.737	ENSFHEG00000001768	polr2a	90	94.737	Fundulus_heteroclitus
ENSPCAG00000006951	-	91	94.702	ENSGMOG00000007725	polr2a	90	100.000	Gadus_morhua
ENSPCAG00000006951	-	90	94.868	ENSGAFG00000005389	polr2a	91	94.868	Gambusia_affinis
ENSPCAG00000006951	-	91	95.099	ENSGACG00000019366	polr2a	90	95.099	Gasterosteus_aculeatus
ENSPCAG00000006951	-	92	99.868	ENSGGOG00000014800	-	92	99.868	Gorilla_gorilla
ENSPCAG00000006951	-	81	95.000	ENSHBUG00000018937	polr2a	91	95.000	Haplochromis_burtoni
ENSPCAG00000006951	-	92	99.737	ENSHGLG00000012381	POLR2A	92	99.737	Heterocephalus_glaber_female
ENSPCAG00000006951	-	92	99.737	ENSHGLG00100014843	POLR2A	92	99.737	Heterocephalus_glaber_male
ENSPCAG00000006951	-	74	94.474	ENSHCOG00000011874	polr2a	74	94.474	Hippocampus_comes
ENSPCAG00000006951	-	74	95.132	ENSIPUG00000002613	Polr2a	73	95.132	Ictalurus_punctatus
ENSPCAG00000006951	-	92	99.868	ENSSTOG00000001304	-	92	99.868	Ictidomys_tridecemlineatus
ENSPCAG00000006951	-	92	99.605	ENSJJAG00000013049	Polr2a	92	99.605	Jaculus_jaculus
ENSPCAG00000006951	-	72	94.253	ENSKMAG00000016343	polr2a	77	94.253	Kryptolebias_marmoratus
ENSPCAG00000006951	-	74	95.132	ENSLBEG00000027652	polr2a	74	95.132	Labrus_bergylta
ENSPCAG00000006951	-	72	96.845	ENSLACG00000012071	POLR2A	73	96.845	Latimeria_chalumnae
ENSPCAG00000006951	-	83	95.132	ENSLOCG00000013863	polr2a	90	95.132	Lepisosteus_oculatus
ENSPCAG00000006951	-	92	99.868	ENSLAFG00000008626	-	92	99.868	Loxodonta_africana
ENSPCAG00000006951	-	92	99.737	ENSMMUG00000023620	-	92	99.737	Macaca_mulatta
ENSPCAG00000006951	-	92	99.737	ENSMNEG00000040407	-	92	99.737	Macaca_nemestrina
ENSPCAG00000006951	-	74	96.706	ENSMLEG00000030263	-	83	99.737	Mandrillus_leucophaeus
ENSPCAG00000006951	-	74	94.868	ENSMAMG00000003351	polr2a	74	94.868	Mastacembelus_armatus
ENSPCAG00000006951	-	74	95.000	ENSMZEG00005021429	polr2a	74	95.000	Maylandia_zebra
ENSPCAG00000006951	-	92	99.737	ENSMICG00000013372	-	92	99.737	Microcebus_murinus
ENSPCAG00000006951	-	92	99.868	ENSMOCG00000018279	Polr2a	92	99.868	Microtus_ochrogaster
ENSPCAG00000006951	-	79	95.000	ENSMMOG00000012515	polr2a	87	95.000	Mola_mola
ENSPCAG00000006951	-	92	99.211	ENSMODG00000007009	-	92	99.211	Monodelphis_domestica
ENSPCAG00000006951	-	86	95.263	ENSMALG00000008716	polr2a	90	95.263	Monopterus_albus
ENSPCAG00000006951	-	92	99.868	MGP_CAROLIEiJ_G0016587	Polr2a	92	99.868	Mus_caroli
ENSPCAG00000006951	-	92	99.868	ENSMUSG00000005198	Polr2a	92	99.868	Mus_musculus
ENSPCAG00000006951	-	92	99.868	MGP_PahariEiJ_G0017718	Polr2a	92	99.868	Mus_pahari
ENSPCAG00000006951	-	92	99.868	MGP_SPRETEiJ_G0017423	Polr2a	92	99.868	Mus_spretus
ENSPCAG00000006951	-	92	99.737	ENSMPUG00000009648	-	92	99.737	Mustela_putorius_furo
ENSPCAG00000006951	-	92	99.429	ENSMLUG00000009088	-	92	99.429	Myotis_lucifugus
ENSPCAG00000006951	-	92	99.868	ENSNGAG00000002543	Polr2a	92	99.868	Nannospalax_galili
ENSPCAG00000006951	-	74	95.132	ENSNBRG00000002005	polr2a	73	95.132	Neolamprologus_brichardi
ENSPCAG00000006951	-	92	99.868	ENSNLEG00000009460	-	92	99.868	Nomascus_leucogenys
ENSPCAG00000006951	-	86	99.211	ENSMEUG00000008611	-	83	99.211	Notamacropus_eugenii
ENSPCAG00000006951	-	72	99.737	ENSOPRG00000015116	-	90	99.737	Ochotona_princeps
ENSPCAG00000006951	-	92	99.868	ENSODEG00000017674	-	92	99.868	Octodon_degus
ENSPCAG00000006951	-	74	95.526	ENSONIG00000009231	polr2a	74	95.526	Oreochromis_niloticus
ENSPCAG00000006951	-	92	99.737	ENSOCUG00000017929	-	92	99.737	Oryctolagus_cuniculus
ENSPCAG00000006951	-	74	94.737	ENSORLG00000006431	polr2a	74	94.737	Oryzias_latipes
ENSPCAG00000006951	-	74	94.737	ENSORLG00020010235	polr2a	74	94.737	Oryzias_latipes_hni
ENSPCAG00000006951	-	74	94.868	ENSORLG00015007075	polr2a	74	94.868	Oryzias_latipes_hsok
ENSPCAG00000006951	-	88	95.699	ENSOMEG00000010713	polr2a	90	94.737	Oryzias_melastigma
ENSPCAG00000006951	-	92	99.737	ENSOGAG00000033608	-	92	99.737	Otolemur_garnettii
ENSPCAG00000006951	-	90	99.868	ENSOARG00000013874	-	92	99.868	Ovis_aries
ENSPCAG00000006951	-	85	99.868	ENSPPAG00000043734	-	92	99.868	Pan_paniscus
ENSPCAG00000006951	-	92	99.868	ENSPTRG00000008691	POLR2A	92	99.868	Pan_troglodytes
ENSPCAG00000006951	-	92	99.737	ENSPANG00000024099	-	92	99.737	Papio_anubis
ENSPCAG00000006951	-	69	93.717	ENSPKIG00000005727	polr2a	76	93.717	Paramormyrops_kingsleyae
ENSPCAG00000006951	-	90	96.457	ENSPSIG00000014006	POLR2A	90	96.457	Pelodiscus_sinensis
ENSPCAG00000006951	-	92	95.395	ENSPMGG00000019734	polr2a	90	95.395	Periophthalmus_magnuspinnatus
ENSPCAG00000006951	-	92	99.868	ENSPEMG00000012521	Polr2a	92	99.868	Peromyscus_maniculatus_bairdii
ENSPCAG00000006951	-	78	99.211	ENSPCIG00000028851	-	74	99.211	Phascolarctos_cinereus
ENSPCAG00000006951	-	77	94.868	ENSPFOG00000007890	polr2a	91	94.868	Poecilia_formosa
ENSPCAG00000006951	-	77	94.868	ENSPLAG00000007399	polr2a	91	94.868	Poecilia_latipinna
ENSPCAG00000006951	-	77	94.868	ENSPMEG00000002071	polr2a	91	94.868	Poecilia_mexicana
ENSPCAG00000006951	-	74	94.868	ENSPREG00000013122	polr2a	74	94.868	Poecilia_reticulata
ENSPCAG00000006951	-	92	99.868	ENSPPYG00000007924	-	92	99.868	Pongo_abelii
ENSPCAG00000006951	-	92	99.868	ENSPCOG00000025260	-	92	99.868	Propithecus_coquereli
ENSPCAG00000006951	-	92	99.737	ENSPVAG00000005069	-	92	99.737	Pteropus_vampyrus
ENSPCAG00000006951	-	75	95.000	ENSPNYG00000022340	polr2a	75	95.000	Pundamilia_nyererei
ENSPCAG00000006951	-	74	95.526	ENSPNAG00000011237	polr2a	74	95.526	Pygocentrus_nattereri
ENSPCAG00000006951	-	92	99.737	ENSRNOG00000028834	Polr2a	92	99.737	Rattus_norvegicus
ENSPCAG00000006951	-	74	99.737	ENSRBIG00000002471	-	92	99.737	Rhinopithecus_bieti
ENSPCAG00000006951	-	92	99.737	ENSRROG00000029583	-	92	99.737	Rhinopithecus_roxellana
ENSPCAG00000006951	-	73	88.000	YDL140C	RPO21	89	80.180	Saccharomyces_cerevisiae
ENSPCAG00000006951	-	92	99.868	ENSSBOG00000000808	-	92	99.868	Saimiri_boliviensis_boliviensis
ENSPCAG00000006951	-	84	99.211	ENSSHAG00000002858	-	76	99.211	Sarcophilus_harrisii
ENSPCAG00000006951	-	74	94.868	ENSSFOG00015023275	polr2a	74	94.868	Scleropages_formosus
ENSPCAG00000006951	-	74	94.474	ENSSMAG00000009137	polr2a	74	94.474	Scophthalmus_maximus
ENSPCAG00000006951	-	74	95.263	ENSSDUG00000020466	polr2a	74	95.263	Seriola_dumerili
ENSPCAG00000006951	-	74	95.263	ENSSLDG00000020613	polr2a	74	95.263	Seriola_lalandi_dorsalis
ENSPCAG00000006951	-	88	99.606	ENSSARG00000005875	-	90	99.606	Sorex_araneus
ENSPCAG00000006951	-	92	95.132	ENSSPAG00000016741	polr2a	86	95.132	Stegastes_partitus
ENSPCAG00000006951	-	92	99.342	ENSSSCG00000028278	-	92	99.342	Sus_scrofa
ENSPCAG00000006951	-	91	94.087	ENSTRUG00000012320	polr2a	73	94.087	Takifugu_rubripes
ENSPCAG00000006951	-	91	92.632	ENSTNIG00000010136	polr2a	91	92.632	Tetraodon_nigroviridis
ENSPCAG00000006951	-	66	100.000	ENSTBEG00000013294	-	50	100.000	Tupaia_belangeri
ENSPCAG00000006951	-	92	99.428	ENSTTRG00000014273	-	92	99.428	Tursiops_truncatus
ENSPCAG00000006951	-	88	99.737	ENSUAMG00000014866	-	91	99.737	Ursus_americanus
ENSPCAG00000006951	-	91	99.310	ENSUMAG00000015732	-	91	99.310	Ursus_maritimus
ENSPCAG00000006951	-	61	99.457	ENSVPAG00000008842	-	70	99.457	Vicugna_pacos
ENSPCAG00000006951	-	74	99.737	ENSVVUG00000027878	-	75	99.737	Vulpes_vulpes
ENSPCAG00000006951	-	73	96.883	ENSXETG00000012465	polr2a	73	96.883	Xenopus_tropicalis
ENSPCAG00000006951	-	84	94.737	ENSXCOG00000001804	polr2a	85	94.737	Xiphophorus_couchianus
ENSPCAG00000006951	-	74	94.737	ENSXMAG00000015687	polr2a	74	94.737	Xiphophorus_maculatus