EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000007430 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 71432 bases
Position: chrGeneScaffold_3815:2185-73616
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007097	Npa1	PF11707.8	2.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000007584	URB1-201	6819	-	ENSPCAP00000007097	2272 (aa)	-	UPI00018AF43B

Gene Model

Click here to download ENSPCAG00000007430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000007430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000007430	URB1	99	68.037	ENSG00000142207	URB1	99	68.051	Homo_sapiens
ENSPCAG00000007430	URB1	96	50.221	ENSAPOG00000020308	urb1	98	50.221	Acanthochromis_polyacanthus
ENSPCAG00000007430	URB1	99	67.373	ENSAMEG00000011998	URB1	99	67.417	Ailuropoda_melanoleuca
ENSPCAG00000007430	URB1	88	50.058	ENSACIG00000003248	urb1	91	50.058	Amphilophus_citrinellus
ENSPCAG00000007430	URB1	94	50.748	ENSAOCG00000010364	urb1	98	50.748	Amphiprion_ocellaris
ENSPCAG00000007430	URB1	93	50.577	ENSAPEG00000010758	urb1	97	50.577	Amphiprion_percula
ENSPCAG00000007430	URB1	97	40.142	ENSATEG00000011790	urb1	96	40.089	Anabas_testudineus
ENSPCAG00000007430	URB1	96	49.163	ENSAPLG00000012791	URB1	99	49.254	Anas_platyrhynchos
ENSPCAG00000007430	URB1	99	46.204	ENSACAG00000002817	URB1	99	46.248	Anolis_carolinensis
ENSPCAG00000007430	URB1	96	80.905	ENSANAG00000024617	URB1	98	80.905	Aotus_nancymaae
ENSPCAG00000007430	URB1	99	39.789	ENSACLG00000024865	urb1	99	39.745	Astatotilapia_calliptera
ENSPCAG00000007430	URB1	99	37.440	ENSAMXG00000012306	urb1	99	37.194	Astyanax_mexicanus
ENSPCAG00000007430	URB1	99	65.582	ENSBTAG00000012412	URB1	99	65.773	Bos_taurus
ENSPCAG00000007430	URB1	99	66.505	ENSCJAG00000009118	URB1	99	66.505	Callithrix_jacchus
ENSPCAG00000007430	URB1	99	67.738	ENSCAFG00000008892	URB1	99	67.738	Canis_familiaris
ENSPCAG00000007430	URB1	99	67.343	ENSCAFG00020025994	-	99	67.343	Canis_lupus_dingo
ENSPCAG00000007430	URB1	99	67.564	ENSCAFG00020025987	-	99	67.564	Canis_lupus_dingo
ENSPCAG00000007430	URB1	99	65.495	ENSCHIG00000015645	URB1	99	65.641	Capra_hircus
ENSPCAG00000007430	URB1	99	67.079	ENSTSYG00000013286	URB1	99	67.079	Carlito_syrichta
ENSPCAG00000007430	URB1	97	63.751	ENSCAPG00000015589	URB1	99	63.751	Cavia_aperea
ENSPCAG00000007430	URB1	99	64.815	ENSCPOG00000006748	URB1	99	64.815	Cavia_porcellus
ENSPCAG00000007430	URB1	99	66.976	ENSCCAG00000021299	URB1	99	66.976	Cebus_capucinus
ENSPCAG00000007430	URB1	99	67.608	ENSCATG00000042630	URB1	99	67.608	Cercocebus_atys
ENSPCAG00000007430	URB1	99	66.402	ENSCLAG00000005262	URB1	99	66.402	Chinchilla_lanigera
ENSPCAG00000007430	URB1	99	66.081	ENSCSAG00000009584	URB1	99	66.081	Chlorocebus_sabaeus
ENSPCAG00000007430	URB1	99	50.654	ENSCPBG00000006454	URB1	99	50.785	Chrysemys_picta_bellii
ENSPCAG00000007430	URB1	99	67.329	ENSCANG00000031088	URB1	99	67.329	Colobus_angolensis_palliatus
ENSPCAG00000007430	URB1	98	63.130	ENSCGRG00001010616	Urb1	99	62.687	Cricetulus_griseus_chok1gshd
ENSPCAG00000007430	URB1	98	62.826	ENSCGRG00000015840	Urb1	99	62.511	Cricetulus_griseus_crigri
ENSPCAG00000007430	URB1	96	48.202	ENSCSEG00000012616	urb1	96	48.202	Cynoglossus_semilaevis
ENSPCAG00000007430	URB1	92	49.219	ENSCVAG00000009076	urb1	98	49.219	Cyprinodon_variegatus
ENSPCAG00000007430	URB1	99	39.649	ENSDARG00000060308	urb1	99	39.597	Danio_rerio
ENSPCAG00000007430	URB1	85	69.482	ENSDNOG00000015586	URB1	99	69.482	Dasypus_novemcinctus
ENSPCAG00000007430	URB1	99	65.904	ENSDORG00000006735	Urb1	99	65.948	Dipodomys_ordii
ENSPCAG00000007430	URB1	89	74.820	ENSETEG00000009080	URB1	89	74.820	Echinops_telfairi
ENSPCAG00000007430	URB1	99	67.875	ENSEASG00005007711	URB1	97	72.271	Equus_asinus_asinus
ENSPCAG00000007430	URB1	93	75.858	ENSECAG00000013206	URB1	99	75.858	Equus_caballus
ENSPCAG00000007430	URB1	54	79.085	ENSEEUG00000003626	-	54	77.644	Erinaceus_europaeus
ENSPCAG00000007430	URB1	94	51.322	ENSELUG00000020516	urb1	95	51.322	Esox_lucius
ENSPCAG00000007430	URB1	99	67.344	ENSFCAG00000002177	URB1	99	67.432	Felis_catus
ENSPCAG00000007430	URB1	91	58.084	ENSFALG00000004636	URB1	99	45.174	Ficedula_albicollis
ENSPCAG00000007430	URB1	99	65.683	ENSFDAG00000007288	URB1	95	65.683	Fukomys_damarensis
ENSPCAG00000007430	URB1	99	37.533	ENSFHEG00000000202	urb1	99	37.401	Fundulus_heteroclitus
ENSPCAG00000007430	URB1	88	47.680	ENSGMOG00000001838	urb1	94	42.771	Gadus_morhua
ENSPCAG00000007430	URB1	99	49.671	ENSGALG00000015887	URB1	99	49.671	Gallus_gallus
ENSPCAG00000007430	URB1	88	50.863	ENSGAFG00000020694	urb1	94	50.863	Gambusia_affinis
ENSPCAG00000007430	URB1	98	40.193	ENSGACG00000011703	urb1	99	40.193	Gasterosteus_aculeatus
ENSPCAG00000007430	URB1	99	50.479	ENSGAGG00000022544	URB1	99	50.479	Gopherus_agassizii
ENSPCAG00000007430	URB1	99	67.696	ENSGGOG00000000285	URB1	99	67.696	Gorilla_gorilla
ENSPCAG00000007430	URB1	99	39.745	ENSHBUG00000001904	urb1	99	39.701	Haplochromis_burtoni
ENSPCAG00000007430	URB1	99	64.655	ENSHGLG00000004907	URB1	99	64.655	Heterocephalus_glaber_female
ENSPCAG00000007430	URB1	99	65.244	ENSHGLG00100010749	URB1	99	65.244	Heterocephalus_glaber_male
ENSPCAG00000007430	URB1	74	43.494	ENSHCOG00000018683	urb1	97	43.494	Hippocampus_comes
ENSPCAG00000007430	URB1	96	46.111	ENSIPUG00000014721	urb1	99	36.989	Ictalurus_punctatus
ENSPCAG00000007430	URB1	98	66.429	ENSSTOG00000004539	URB1	99	66.241	Ictidomys_tridecemlineatus
ENSPCAG00000007430	URB1	96	43.344	ENSKMAG00000006001	urb1	96	50.496	Kryptolebias_marmoratus
ENSPCAG00000007430	URB1	92	49.063	ENSLBEG00000027208	urb1	97	49.063	Labrus_bergylta
ENSPCAG00000007430	URB1	99	43.358	ENSLACG00000017059	URB1	99	43.401	Latimeria_chalumnae
ENSPCAG00000007430	URB1	99	40.832	ENSLOCG00000009190	urb1	99	40.895	Lepisosteus_oculatus
ENSPCAG00000007430	URB1	99	73.442	ENSLAFG00000010407	URB1	99	73.442	Loxodonta_africana
ENSPCAG00000007430	URB1	99	67.741	ENSMFAG00000034391	URB1	96	67.741	Macaca_fascicularis
ENSPCAG00000007430	URB1	99	67.564	ENSMMUG00000010295	URB1	99	67.564	Macaca_mulatta
ENSPCAG00000007430	URB1	99	66.476	ENSMNEG00000032981	URB1	99	66.476	Macaca_nemestrina
ENSPCAG00000007430	URB1	99	67.608	ENSMLEG00000041435	URB1	99	67.608	Mandrillus_leucophaeus
ENSPCAG00000007430	URB1	99	38.804	ENSMAMG00000011238	urb1	99	38.552	Mastacembelus_armatus
ENSPCAG00000007430	URB1	99	36.985	ENSMZEG00005011862	urb1	99	36.941	Maylandia_zebra
ENSPCAG00000007430	URB1	97	49.688	ENSMGAG00000014512	URB1	99	49.688	Meleagris_gallopavo
ENSPCAG00000007430	URB1	94	69.420	ENSMAUG00000010516	Urb1	99	70.425	Mesocricetus_auratus
ENSPCAG00000007430	URB1	99	67.577	ENSMICG00000016424	URB1	99	67.577	Microcebus_murinus
ENSPCAG00000007430	URB1	99	63.126	ENSMOCG00000012613	Urb1	99	62.818	Microtus_ochrogaster
ENSPCAG00000007430	URB1	99	55.687	ENSMODG00000021076	URB1	99	55.668	Monodelphis_domestica
ENSPCAG00000007430	URB1	90	49.000	ENSMALG00000017411	urb1	93	49.000	Monopterus_albus
ENSPCAG00000007430	URB1	99	62.819	MGP_CAROLIEiJ_G0020948	Urb1	99	62.467	Mus_caroli
ENSPCAG00000007430	URB1	99	62.808	ENSMUSG00000039929	Urb1	99	62.808	Mus_musculus
ENSPCAG00000007430	URB1	99	62.952	MGP_PahariEiJ_G0016653	Urb1	99	62.952	Mus_pahari
ENSPCAG00000007430	URB1	99	62.643	MGP_SPRETEiJ_G0021854	Urb1	99	62.643	Mus_spretus
ENSPCAG00000007430	URB1	99	66.887	ENSMPUG00000001123	URB1	99	66.887	Mustela_putorius_furo
ENSPCAG00000007430	URB1	99	63.019	ENSNGAG00000001905	Urb1	99	63.019	Nannospalax_galili
ENSPCAG00000007430	URB1	81	41.201	ENSNBRG00000001049	urb1	99	41.269	Neolamprologus_brichardi
ENSPCAG00000007430	URB1	99	65.871	ENSNLEG00000026872	URB1	99	65.886	Nomascus_leucogenys
ENSPCAG00000007430	URB1	92	58.349	ENSMEUG00000010828	URB1	95	52.895	Notamacropus_eugenii
ENSPCAG00000007430	URB1	99	61.471	ENSOPRG00000013482	URB1	99	61.471	Ochotona_princeps
ENSPCAG00000007430	URB1	99	64.670	ENSODEG00000002587	URB1	99	64.670	Octodon_degus
ENSPCAG00000007430	URB1	99	39.860	ENSONIG00000005599	urb1	99	39.860	Oreochromis_niloticus
ENSPCAG00000007430	URB1	99	66.225	ENSOCUG00000009381	URB1	99	66.225	Oryctolagus_cuniculus
ENSPCAG00000007430	URB1	99	39.589	ENSORLG00000003429	urb1	99	39.545	Oryzias_latipes
ENSPCAG00000007430	URB1	99	39.144	ENSORLG00020013785	urb1	99	39.144	Oryzias_latipes_hni
ENSPCAG00000007430	URB1	91	47.440	ENSORLG00015019421	urb1	97	47.440	Oryzias_latipes_hsok
ENSPCAG00000007430	URB1	78	51.163	ENSOMEG00000002094	urb1	98	51.163	Oryzias_melastigma
ENSPCAG00000007430	URB1	99	67.107	ENSOGAG00000017140	URB1	99	67.107	Otolemur_garnettii
ENSPCAG00000007430	URB1	97	65.450	ENSOARG00000013679	URB1	99	65.450	Ovis_aries
ENSPCAG00000007430	URB1	99	68.182	ENSPPAG00000003423	URB1	99	68.182	Pan_paniscus
ENSPCAG00000007430	URB1	99	67.507	ENSPPRG00000023131	URB1	99	67.507	Panthera_pardus
ENSPCAG00000007430	URB1	92	65.533	ENSPTIG00000016125	URB1	97	65.533	Panthera_tigris_altaica
ENSPCAG00000007430	URB1	99	68.094	ENSPTRG00000013852	URB1	99	68.094	Pan_troglodytes
ENSPCAG00000007430	URB1	99	67.696	ENSPANG00000021964	URB1	99	67.696	Papio_anubis
ENSPCAG00000007430	URB1	99	41.366	ENSPKIG00000003683	urb1	98	41.231	Paramormyrops_kingsleyae
ENSPCAG00000007430	URB1	99	64.113	ENSPEMG00000021205	Urb1	99	63.760	Peromyscus_maniculatus_bairdii
ENSPCAG00000007430	URB1	76	35.565	ENSPMAG00000009733	URB1	95	35.565	Petromyzon_marinus
ENSPCAG00000007430	URB1	99	55.341	ENSPCIG00000016350	URB1	99	55.712	Phascolarctos_cinereus
ENSPCAG00000007430	URB1	96	38.569	ENSPLAG00000004371	urb1	99	38.524	Poecilia_latipinna
ENSPCAG00000007430	URB1	99	39.264	ENSPMEG00000006634	urb1	99	39.220	Poecilia_mexicana
ENSPCAG00000007430	URB1	99	39.637	ENSPREG00000013453	urb1	99	39.593	Poecilia_reticulata
ENSPCAG00000007430	URB1	99	67.683	ENSPPYG00000011359	URB1	99	67.698	Pongo_abelii
ENSPCAG00000007430	URB1	99	68.150	ENSPCOG00000022695	URB1	99	68.150	Propithecus_coquereli
ENSPCAG00000007430	URB1	99	69.408	ENSPVAG00000000889	URB1	99	69.408	Pteropus_vampyrus
ENSPCAG00000007430	URB1	99	38.688	ENSPNYG00000010589	urb1	99	38.468	Pundamilia_nyererei
ENSPCAG00000007430	URB1	99	36.392	ENSPNAG00000019324	urb1	99	36.515	Pygocentrus_nattereri
ENSPCAG00000007430	URB1	99	62.704	ENSRNOG00000002080	Urb1	99	62.792	Rattus_norvegicus
ENSPCAG00000007430	URB1	99	67.079	ENSRBIG00000033122	URB1	99	67.079	Rhinopithecus_bieti
ENSPCAG00000007430	URB1	99	67.079	ENSRROG00000040237	URB1	99	67.079	Rhinopithecus_roxellana
ENSPCAG00000007430	URB1	99	67.019	ENSSBOG00000027672	URB1	99	67.019	Saimiri_boliviensis_boliviensis
ENSPCAG00000007430	URB1	99	54.688	ENSSHAG00000005140	URB1	100	54.609	Sarcophilus_harrisii
ENSPCAG00000007430	URB1	92	41.235	ENSSFOG00015000339	urb1	99	41.121	Scleropages_formosus
ENSPCAG00000007430	URB1	99	38.940	ENSSMAG00000003782	urb1	99	39.261	Scophthalmus_maximus
ENSPCAG00000007430	URB1	99	40.017	ENSSDUG00000012313	urb1	99	40.105	Seriola_dumerili
ENSPCAG00000007430	URB1	99	40.017	ENSSLDG00000023179	urb1	99	40.105	Seriola_lalandi_dorsalis
ENSPCAG00000007430	URB1	99	47.953	ENSSPUG00000012447	URB1	99	48.298	Sphenodon_punctatus
ENSPCAG00000007430	URB1	99	39.616	ENSSPAG00000006325	urb1	99	39.747	Stegastes_partitus
ENSPCAG00000007430	URB1	99	66.652	ENSSSCG00000032024	URB1	99	66.652	Sus_scrofa
ENSPCAG00000007430	URB1	73	52.174	ENSTGUG00000013442	URB1	99	52.174	Taeniopygia_guttata
ENSPCAG00000007430	URB1	99	38.928	ENSTRUG00000009372	urb1	99	38.928	Takifugu_rubripes
ENSPCAG00000007430	URB1	99	38.482	ENSTNIG00000016277	urb1	99	38.472	Tetraodon_nigroviridis
ENSPCAG00000007430	URB1	79	70.120	ENSTBEG00000010044	URB1	79	70.120	Tupaia_belangeri
ENSPCAG00000007430	URB1	90	65.586	ENSTTRG00000007712	URB1	92	65.625	Tursiops_truncatus
ENSPCAG00000007430	URB1	99	67.550	ENSUAMG00000012231	URB1	99	67.550	Ursus_americanus
ENSPCAG00000007430	URB1	86	73.072	ENSUMAG00000017419	URB1	97	68.082	Ursus_maritimus
ENSPCAG00000007430	URB1	66	86.667	ENSVPAG00000001164	URB1	66	86.667	Vicugna_pacos
ENSPCAG00000007430	URB1	99	67.504	ENSVVUG00000000551	URB1	99	67.504	Vulpes_vulpes
ENSPCAG00000007430	URB1	99	44.483	ENSXETG00000009895	urb1	99	44.483	Xenopus_tropicalis
ENSPCAG00000007430	URB1	99	37.232	ENSXCOG00000005500	urb1	99	37.232	Xiphophorus_couchianus
ENSPCAG00000007430	URB1	95	42.728	ENSXMAG00000007253	urb1	97	42.728	Xiphophorus_maculatus