EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000007546 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 92110 bases
Position: chrGeneScaffold_3590:900-93009
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007084	La	PF05383.17	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000007570	LARP1B-201	2739	-	ENSPCAP00000007084	913 (aa)	-	UPI00018AF9F0

Gene Model

Click here to download ENSPCAG00000007546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000007546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000007546	LARP1B	96	58.206	ENSPCAG00000006407	LARP1	94	57.768

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000007546	LARP1B	99	84.699	ENSG00000138709	LARP1B	96	95.833	Homo_sapiens
ENSPCAG00000007546	LARP1B	97	55.603	ENSAPOG00000020101	larp1b	84	55.076	Acanthochromis_polyacanthus
ENSPCAG00000007546	LARP1B	60	88.203	ENSAMEG00000002748	LARP1B	100	88.203	Ailuropoda_melanoleuca
ENSPCAG00000007546	LARP1B	96	53.965	ENSACIG00000023890	larp1b	83	52.671	Amphilophus_citrinellus
ENSPCAG00000007546	LARP1B	88	55.488	ENSAOCG00000014268	larp1b	84	55.353	Amphiprion_ocellaris
ENSPCAG00000007546	LARP1B	97	56.052	ENSAPEG00000004126	larp1b	83	55.342	Amphiprion_percula
ENSPCAG00000007546	LARP1B	99	54.313	ENSATEG00000017849	larp1b	85	54.449	Anabas_testudineus
ENSPCAG00000007546	LARP1B	95	66.408	ENSAPLG00000010129	LARP1B	96	67.042	Anas_platyrhynchos
ENSPCAG00000007546	LARP1B	93	76.319	ENSACAG00000011338	LARP1B	86	76.319	Anolis_carolinensis
ENSPCAG00000007546	LARP1B	82	76.720	ENSANAG00000034618	LARP1B	96	77.128	Aotus_nancymaae
ENSPCAG00000007546	LARP1B	96	54.783	ENSACLG00000011948	larp1b	84	54.114	Astatotilapia_calliptera
ENSPCAG00000007546	LARP1B	98	50.158	ENSAMXG00000006805	larp1b	82	52.081	Astyanax_mexicanus
ENSPCAG00000007546	LARP1B	100	84.951	ENSBTAG00000012135	LARP1B	98	84.990	Bos_taurus
ENSPCAG00000007546	LARP1B	99	84.759	ENSCJAG00000003338	LARP1B	98	87.538	Callithrix_jacchus
ENSPCAG00000007546	LARP1B	100	86.681	ENSCAFG00000003831	LARP1B	100	86.914	Canis_familiaris
ENSPCAG00000007546	LARP1B	100	86.681	ENSCAFG00020018899	LARP1B	98	89.058	Canis_lupus_dingo
ENSPCAG00000007546	LARP1B	100	85.278	ENSCHIG00000023144	LARP1B	98	86.667	Capra_hircus
ENSPCAG00000007546	LARP1B	99	84.995	ENSCCAG00000021948	LARP1B	98	88.146	Cebus_capucinus
ENSPCAG00000007546	LARP1B	99	83.716	ENSCATG00000013541	LARP1B	100	83.716	Cercocebus_atys
ENSPCAG00000007546	LARP1B	99	84.733	ENSCSAG00000003582	LARP1B	100	84.733	Chlorocebus_sabaeus
ENSPCAG00000007546	LARP1B	100	77.402	ENSCHOG00000005354	LARP1B	100	77.293	Choloepus_hoffmanni
ENSPCAG00000007546	LARP1B	99	74.292	ENSCPBG00000017480	LARP1B	86	74.510	Chrysemys_picta_bellii
ENSPCAG00000007546	LARP1B	99	80.999	ENSCANG00000026958	LARP1B	100	80.999	Colobus_angolensis_palliatus
ENSPCAG00000007546	LARP1B	96	52.432	ENSCSEG00000013519	larp1b	83	52.497	Cynoglossus_semilaevis
ENSPCAG00000007546	LARP1B	97	55.016	ENSCVAG00000005046	larp1b	84	54.536	Cyprinodon_variegatus
ENSPCAG00000007546	LARP1B	99	52.935	ENSDARG00000061169	larp1b	80	54.292	Danio_rerio
ENSPCAG00000007546	LARP1B	55	86.667	ENSDNOG00000018765	-	99	86.863	Dasypus_novemcinctus
ENSPCAG00000007546	LARP1B	89	80.672	ENSETEG00000012497	LARP1B	89	80.672	Echinops_telfairi
ENSPCAG00000007546	LARP1B	94	49.514	ENSEBUG00000003668	larp1b	87	51.130	Eptatretus_burgeri
ENSPCAG00000007546	LARP1B	100	85.699	ENSEASG00005018106	LARP1B	98	89.362	Equus_asinus_asinus
ENSPCAG00000007546	LARP1B	100	85.371	ENSECAG00000001088	LARP1B	81	85.371	Equus_caballus
ENSPCAG00000007546	LARP1B	60	73.184	ENSELUG00000023774	larp1b	68	73.184	Esox_lucius
ENSPCAG00000007546	LARP1B	56	85.547	ENSFCAG00000014650	-	98	87.538	Felis_catus
ENSPCAG00000007546	LARP1B	98	67.960	ENSFALG00000008098	LARP1B	98	67.176	Ficedula_albicollis
ENSPCAG00000007546	LARP1B	99	54.307	ENSFHEG00000010264	larp1b	81	54.517	Fundulus_heteroclitus
ENSPCAG00000007546	LARP1B	70	65.306	ENSGMOG00000005207	larp1b	62	65.646	Gadus_morhua
ENSPCAG00000007546	LARP1B	99	66.126	ENSGALG00000010207	LARP1B	83	69.169	Gallus_gallus
ENSPCAG00000007546	LARP1B	90	57.261	ENSGAFG00000012012	larp1b	96	56.279	Gambusia_affinis
ENSPCAG00000007546	LARP1B	97	50.644	ENSGACG00000004609	larp1b	83	53.433	Gasterosteus_aculeatus
ENSPCAG00000007546	LARP1B	99	73.885	ENSGAGG00000017209	LARP1B	85	74.102	Gopherus_agassizii
ENSPCAG00000007546	LARP1B	99	85.027	ENSGGOG00000015900	LARP1B	100	85.027	Gorilla_gorilla
ENSPCAG00000007546	LARP1B	96	54.940	ENSHBUG00000009730	larp1b	83	54.268	Haplochromis_burtoni
ENSPCAG00000007546	LARP1B	76	58.298	ENSHCOG00000000918	larp1b	96	58.865	Hippocampus_comes
ENSPCAG00000007546	LARP1B	87	58.243	ENSIPUG00000012138	larp1b	74	57.794	Ictalurus_punctatus
ENSPCAG00000007546	LARP1B	95	52.805	ENSKMAG00000011589	larp1b	85	53.583	Kryptolebias_marmoratus
ENSPCAG00000007546	LARP1B	97	54.968	ENSLBEG00000005655	larp1b	85	54.440	Labrus_bergylta
ENSPCAG00000007546	LARP1B	99	69.813	ENSLACG00000015247	LARP1B	100	69.466	Latimeria_chalumnae
ENSPCAG00000007546	LARP1B	99	64.008	ENSLOCG00000010684	larp1b	94	64.226	Lepisosteus_oculatus
ENSPCAG00000007546	LARP1B	99	85.027	ENSMFAG00000002218	LARP1B	98	87.234	Macaca_fascicularis
ENSPCAG00000007546	LARP1B	99	85.137	ENSMMUG00000021347	LARP1B	98	87.234	Macaca_mulatta
ENSPCAG00000007546	LARP1B	91	82.730	ENSMNEG00000030406	LARP1B	100	82.730	Macaca_nemestrina
ENSPCAG00000007546	LARP1B	99	81.967	ENSMLEG00000009306	LARP1B	100	82.225	Mandrillus_leucophaeus
ENSPCAG00000007546	LARP1B	97	55.161	ENSMAMG00000000081	larp1b	84	55.269	Mastacembelus_armatus
ENSPCAG00000007546	LARP1B	76	60.832	ENSMZEG00005002545	larp1b	96	58.718	Maylandia_zebra
ENSPCAG00000007546	LARP1B	94	61.573	ENSMGAG00000004809	LARP1B	98	60.797	Meleagris_gallopavo
ENSPCAG00000007546	LARP1B	55	67.659	ENSMICG00000028052	-	99	67.659	Microcebus_murinus
ENSPCAG00000007546	LARP1B	100	87.445	ENSMICG00000036111	LARP1B	98	90.578	Microcebus_murinus
ENSPCAG00000007546	LARP1B	99	82.244	ENSMODG00000012300	LARP1B	81	82.680	Monodelphis_domestica
ENSPCAG00000007546	LARP1B	99	54.277	ENSMALG00000003638	larp1b	85	54.575	Monopterus_albus
ENSPCAG00000007546	LARP1B	100	85.917	ENSMPUG00000017365	LARP1B	81	85.917	Mustela_putorius_furo
ENSPCAG00000007546	LARP1B	96	80.574	ENSMLUG00000010229	LARP1B	97	80.574	Myotis_lucifugus
ENSPCAG00000007546	LARP1B	76	55.316	ENSNBRG00000023846	larp1b	81	53.036	Neolamprologus_brichardi
ENSPCAG00000007546	LARP1B	99	84.170	ENSNLEG00000013819	LARP1B	98	86.322	Nomascus_leucogenys
ENSPCAG00000007546	LARP1B	87	78.095	ENSMEUG00000010308	LARP1B	88	78.095	Notamacropus_eugenii
ENSPCAG00000007546	LARP1B	99	68.087	ENSOPRG00000005478	LARP1B	99	67.978	Ochotona_princeps
ENSPCAG00000007546	LARP1B	96	54.252	ENSONIG00000012386	larp1b	94	54.261	Oreochromis_niloticus
ENSPCAG00000007546	LARP1B	100	84.389	ENSOCUG00000013330	LARP1B	98	84.498	Oryctolagus_cuniculus
ENSPCAG00000007546	LARP1B	97	53.496	ENSORLG00000017954	larp1b	84	53.960	Oryzias_latipes
ENSPCAG00000007546	LARP1B	99	52.941	ENSORLG00020013081	larp1b	84	53.985	Oryzias_latipes_hni
ENSPCAG00000007546	LARP1B	99	54.189	ENSORLG00015009580	larp1b	84	53.390	Oryzias_latipes_hsok
ENSPCAG00000007546	LARP1B	99	53.690	ENSOMEG00000004210	larp1b	84	53.682	Oryzias_melastigma
ENSPCAG00000007546	LARP1B	95	85.257	ENSOGAG00000005771	LARP1B	98	85.257	Otolemur_garnettii
ENSPCAG00000007546	LARP1B	99	84.934	ENSOARG00000015300	LARP1B	100	84.934	Ovis_aries
ENSPCAG00000007546	LARP1B	99	84.809	ENSPPAG00000030439	LARP1B	100	84.809	Pan_paniscus
ENSPCAG00000007546	LARP1B	56	85.742	ENSPPRG00000002743	-	98	87.538	Panthera_pardus
ENSPCAG00000007546	LARP1B	56	85.742	ENSPTIG00000011225	LARP1B	98	87.538	Panthera_tigris_altaica
ENSPCAG00000007546	LARP1B	99	84.590	ENSPTRG00000016437	LARP1B	100	84.590	Pan_troglodytes
ENSPCAG00000007546	LARP1B	99	85.137	ENSPANG00000012488	LARP1B	100	85.137	Papio_anubis
ENSPCAG00000007546	LARP1B	95	49.384	ENSPKIG00000014360	larp1b	87	50.057	Paramormyrops_kingsleyae
ENSPCAG00000007546	LARP1B	95	75.540	ENSPSIG00000012885	LARP1B	93	74.858	Pelodiscus_sinensis
ENSPCAG00000007546	LARP1B	78	58.345	ENSPMGG00000007207	larp1b	91	57.323	Periophthalmus_magnuspinnatus
ENSPCAG00000007546	LARP1B	73	56.286	ENSPMAG00000002700	larp1b	97	51.366	Petromyzon_marinus
ENSPCAG00000007546	LARP1B	99	81.542	ENSPCIG00000026516	LARP1B	98	82.667	Phascolarctos_cinereus
ENSPCAG00000007546	LARP1B	56	50.554	ENSPFOG00000022837	-	78	50.369	Poecilia_formosa
ENSPCAG00000007546	LARP1B	99	53.846	ENSPFOG00000019519	larp1b	85	53.641	Poecilia_formosa
ENSPCAG00000007546	LARP1B	99	55.005	ENSPLAG00000007115	larp1b	84	54.795	Poecilia_latipinna
ENSPCAG00000007546	LARP1B	99	55.042	ENSPMEG00000001224	larp1b	84	54.832	Poecilia_mexicana
ENSPCAG00000007546	LARP1B	89	86.677	ENSPCOG00000021874	LARP1B	98	90.214	Propithecus_coquereli
ENSPCAG00000007546	LARP1B	100	78.930	ENSPVAG00000005373	LARP1B	100	78.930	Pteropus_vampyrus
ENSPCAG00000007546	LARP1B	76	60.372	ENSPNYG00000017357	larp1b	96	58.131	Pundamilia_nyererei
ENSPCAG00000007546	LARP1B	95	55.000	ENSPNAG00000008823	larp1b	84	54.925	Pygocentrus_nattereri
ENSPCAG00000007546	LARP1B	56	83.594	ENSRBIG00000039982	-	98	84.802	Rhinopithecus_bieti
ENSPCAG00000007546	LARP1B	99	85.137	ENSRROG00000030771	LARP1B	98	87.234	Rhinopithecus_roxellana
ENSPCAG00000007546	LARP1B	73	81.194	ENSSHAG00000014474	LARP1B	99	81.859	Sarcophilus_harrisii
ENSPCAG00000007546	LARP1B	96	54.230	ENSSMAG00000006347	larp1b	92	53.659	Scophthalmus_maximus
ENSPCAG00000007546	LARP1B	96	55.793	ENSSDUG00000004182	larp1b	82	55.317	Seriola_dumerili
ENSPCAG00000007546	LARP1B	76	60.144	ENSSLDG00000014613	larp1b	69	59.072	Seriola_lalandi_dorsalis
ENSPCAG00000007546	LARP1B	97	66.554	ENSSPUG00000011837	LARP1B	97	66.553	Sphenodon_punctatus
ENSPCAG00000007546	LARP1B	97	55.940	ENSSPAG00000017772	larp1b	84	55.074	Stegastes_partitus
ENSPCAG00000007546	LARP1B	100	84.498	ENSSSCG00000034280	LARP1B	99	90.722	Sus_scrofa
ENSPCAG00000007546	LARP1B	90	68.653	ENSTGUG00000002098	-	97	64.189	Taeniopygia_guttata
ENSPCAG00000007546	LARP1B	99	51.940	ENSTRUG00000005612	larp1b	83	53.556	Takifugu_rubripes
ENSPCAG00000007546	LARP1B	96	52.366	ENSTNIG00000012398	larp1b	94	53.029	Tetraodon_nigroviridis
ENSPCAG00000007546	LARP1B	87	80.000	ENSTBEG00000004177	LARP1B	88	75.238	Tupaia_belangeri
ENSPCAG00000007546	LARP1B	100	76.118	ENSTTRG00000012984	LARP1B	100	76.118	Tursiops_truncatus
ENSPCAG00000007546	LARP1B	100	86.026	ENSUMAG00000007373	LARP1B	98	86.026	Ursus_maritimus
ENSPCAG00000007546	LARP1B	99	74.449	ENSVPAG00000007223	LARP1B	99	74.449	Vicugna_pacos
ENSPCAG00000007546	LARP1B	100	86.572	ENSVVUG00000011307	LARP1B	99	88.212	Vulpes_vulpes
ENSPCAG00000007546	LARP1B	95	61.017	ENSXETG00000022512	larp1b	87	59.801	Xenopus_tropicalis
ENSPCAG00000007546	LARP1B	73	58.146	ENSXCOG00000004435	larp1b	79	53.652	Xiphophorus_couchianus
ENSPCAG00000007546	LARP1B	97	55.471	ENSXMAG00000008150	larp1b	84	54.517	Xiphophorus_maculatus