EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000007564 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 140082 bases
Position: chrGeneScaffold_6292:153-140234
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007176	ResIII	PF04851.15	5.2e-07	1	1
ENSPCAP00000007176	BRK	PF07533.16	5.2e-31	1	2
ENSPCAP00000007176	BRK	PF07533.16	5.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000007669	CHD9-201	7818	-	ENSPCAP00000007176	2606 (aa)	-	UPI00018B008E

Gene Model

Click here to download ENSPCAG00000007564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000007564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000007564	CHD9	51	79.575	ENSPCAG00000007099	CHD8	56	79.575
ENSPCAG00000007564	CHD9	62	74.867	ENSPCAG00000000227	CHD7	58	71.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000007564	CHD9	86	96.415	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSPCAG00000007564	CHD9	73	82.193	ENSAPOG00000023034	chd9	73	80.273	Acanthochromis_polyacanthus
ENSPCAG00000007564	CHD9	86	96.415	ENSAMEG00000016232	CHD9	77	96.415	Ailuropoda_melanoleuca
ENSPCAG00000007564	CHD9	68	77.068	ENSACIG00000004097	chd9	71	75.410	Amphilophus_citrinellus
ENSPCAG00000007564	CHD9	73	82.193	ENSAOCG00000005487	chd9	72	80.273	Amphiprion_ocellaris
ENSPCAG00000007564	CHD9	73	82.193	ENSAPEG00000009859	chd9	72	80.273	Amphiprion_percula
ENSPCAG00000007564	CHD9	73	82.469	ENSATEG00000002748	chd9	73	80.490	Anabas_testudineus
ENSPCAG00000007564	CHD9	86	91.743	ENSAPLG00000002826	CHD9	73	91.743	Anas_platyrhynchos
ENSPCAG00000007564	CHD9	86	91.101	ENSACAG00000016150	CHD9	77	91.193	Anolis_carolinensis
ENSPCAG00000007564	CHD9	86	96.691	ENSANAG00000015630	CHD9	77	96.691	Aotus_nancymaae
ENSPCAG00000007564	CHD9	73	80.488	ENSACLG00000016899	chd9	73	78.410	Astatotilapia_calliptera
ENSPCAG00000007564	CHD9	73	80.907	ENSAMXG00000005652	chd9	73	79.545	Astyanax_mexicanus
ENSPCAG00000007564	CHD9	86	96.140	ENSBTAG00000002287	CHD9	78	96.140	Bos_taurus
ENSPCAG00000007564	CHD9	86	96.415	ENSCJAG00000001573	CHD9	78	96.415	Callithrix_jacchus
ENSPCAG00000007564	CHD9	86	96.639	ENSCAFG00000009699	CHD9	77	96.639	Canis_familiaris
ENSPCAG00000007564	CHD9	86	96.639	ENSCAFG00020002879	CHD9	77	96.639	Canis_lupus_dingo
ENSPCAG00000007564	CHD9	74	100.000	ENSCHIG00000021000	CHD9	68	100.000	Capra_hircus
ENSPCAG00000007564	CHD9	86	96.232	ENSTSYG00000007693	CHD9	77	96.232	Carlito_syrichta
ENSPCAG00000007564	CHD9	73	94.595	ENSCAPG00000011604	CHD9	68	94.545	Cavia_aperea
ENSPCAG00000007564	CHD9	86	93.820	ENSCPOG00000036544	CHD9	76	93.820	Cavia_porcellus
ENSPCAG00000007564	CHD9	86	96.507	ENSCCAG00000036178	CHD9	78	96.507	Cebus_capucinus
ENSPCAG00000007564	CHD9	86	96.507	ENSCATG00000036753	CHD9	78	96.507	Cercocebus_atys
ENSPCAG00000007564	CHD9	86	95.221	ENSCLAG00000007137	CHD9	99	94.329	Chinchilla_lanigera
ENSPCAG00000007564	CHD9	86	96.507	ENSCSAG00000005311	CHD9	77	96.507	Chlorocebus_sabaeus
ENSPCAG00000007564	CHD9	61	93.865	ENSCHOG00000003935	CHD9	57	93.865	Choloepus_hoffmanni
ENSPCAG00000007564	CHD9	86	92.844	ENSCPBG00000012459	CHD9	85	89.798	Chrysemys_picta_bellii
ENSPCAG00000007564	CHD9	86	96.415	ENSCANG00000030349	CHD9	77	96.415	Colobus_angolensis_palliatus
ENSPCAG00000007564	CHD9	86	94.485	ENSCGRG00001016150	Chd9	73	94.485	Cricetulus_griseus_chok1gshd
ENSPCAG00000007564	CHD9	86	94.485	ENSCGRG00000012850	Chd9	99	93.519	Cricetulus_griseus_crigri
ENSPCAG00000007564	CHD9	73	78.731	ENSCSEG00000009209	chd9	71	78.351	Cynoglossus_semilaevis
ENSPCAG00000007564	CHD9	75	81.169	ENSCVAG00000016195	chd9	73	80.128	Cyprinodon_variegatus
ENSPCAG00000007564	CHD9	63	79.792	ENSDARG00000074498	chd9	69	78.474	Danio_rerio
ENSPCAG00000007564	CHD9	67	95.410	ENSDNOG00000006045	CHD9	75	95.410	Dasypus_novemcinctus
ENSPCAG00000007564	CHD9	54	96.939	ENSDORG00000008523	-	71	96.939	Dipodomys_ordii
ENSPCAG00000007564	CHD9	79	92.941	ENSETEG00000009565	CHD9	71	92.941	Echinops_telfairi
ENSPCAG00000007564	CHD9	86	96.507	ENSEASG00005014832	CHD9	82	95.683	Equus_asinus_asinus
ENSPCAG00000007564	CHD9	86	96.507	ENSECAG00000011505	CHD9	77	96.507	Equus_caballus
ENSPCAG00000007564	CHD9	74	97.790	ENSEEUG00000014515	CHD9	69	97.790	Erinaceus_europaeus
ENSPCAG00000007564	CHD9	69	79.963	ENSELUG00000006031	chd9	73	79.436	Esox_lucius
ENSPCAG00000007564	CHD9	86	96.415	ENSFCAG00000022534	CHD9	77	96.415	Felis_catus
ENSPCAG00000007564	CHD9	70	91.927	ENSFALG00000013276	CHD9	75	91.927	Ficedula_albicollis
ENSPCAG00000007564	CHD9	86	95.680	ENSFDAG00000021037	CHD9	77	95.680	Fukomys_damarensis
ENSPCAG00000007564	CHD9	73	81.485	ENSFHEG00000006068	chd9	72	79.618	Fundulus_heteroclitus
ENSPCAG00000007564	CHD9	56	78.571	ENSGMOG00000006040	chd9	63	78.571	Gadus_morhua
ENSPCAG00000007564	CHD9	86	91.927	ENSGALG00000039178	CHD9	79	91.927	Gallus_gallus
ENSPCAG00000007564	CHD9	74	81.878	ENSGAFG00000010014	chd9	69	79.603	Gambusia_affinis
ENSPCAG00000007564	CHD9	68	80.694	ENSGACG00000016694	chd9	72	80.694	Gasterosteus_aculeatus
ENSPCAG00000007564	CHD9	86	96.507	ENSGGOG00000014816	CHD9	77	96.507	Gorilla_gorilla
ENSPCAG00000007564	CHD9	68	80.809	ENSHBUG00000023322	chd9	73	79.144	Haplochromis_burtoni
ENSPCAG00000007564	CHD9	86	95.772	ENSHGLG00000014938	CHD9	99	94.907	Heterocephalus_glaber_female
ENSPCAG00000007564	CHD9	74	79.063	ENSHCOG00000000937	chd9	70	77.858	Hippocampus_comes
ENSPCAG00000007564	CHD9	69	81.139	ENSIPUG00000016448	chd9	69	80.183	Ictalurus_punctatus
ENSPCAG00000007564	CHD9	86	96.140	ENSSTOG00000022273	CHD9	99	95.255	Ictidomys_tridecemlineatus
ENSPCAG00000007564	CHD9	54	98.105	ENSJJAG00000015741	-	71	98.105	Jaculus_jaculus
ENSPCAG00000007564	CHD9	74	81.036	ENSKMAG00000016784	chd9	68	80.000	Kryptolebias_marmoratus
ENSPCAG00000007564	CHD9	68	80.859	ENSLBEG00000012077	chd9	68	78.649	Labrus_bergylta
ENSPCAG00000007564	CHD9	86	80.808	ENSLACG00000005557	CHD9	73	80.808	Latimeria_chalumnae
ENSPCAG00000007564	CHD9	75	83.031	ENSLOCG00000007225	chd9	69	83.258	Lepisosteus_oculatus
ENSPCAG00000007564	CHD9	86	96.599	ENSLAFG00000015374	CHD9	77	96.599	Loxodonta_africana
ENSPCAG00000007564	CHD9	86	96.507	ENSMFAG00000041354	CHD9	77	96.507	Macaca_fascicularis
ENSPCAG00000007564	CHD9	86	96.507	ENSMMUG00000016310	CHD9	77	96.507	Macaca_mulatta
ENSPCAG00000007564	CHD9	86	96.507	ENSMNEG00000031494	CHD9	86	96.507	Macaca_nemestrina
ENSPCAG00000007564	CHD9	86	96.507	ENSMLEG00000043219	CHD9	77	96.507	Mandrillus_leucophaeus
ENSPCAG00000007564	CHD9	74	81.767	ENSMAMG00000003909	chd9	73	79.529	Mastacembelus_armatus
ENSPCAG00000007564	CHD9	74	82.176	ENSMZEG00005006581	chd9	73	80.255	Maylandia_zebra
ENSPCAG00000007564	CHD9	81	83.838	ENSMGAG00000004642	CHD9	71	83.838	Meleagris_gallopavo
ENSPCAG00000007564	CHD9	86	96.232	ENSMICG00000016679	CHD9	78	96.232	Microcebus_murinus
ENSPCAG00000007564	CHD9	74	80.816	ENSMMOG00000016406	chd9	73	80.759	Mola_mola
ENSPCAG00000007564	CHD9	57	96.049	ENSMODG00000013142	-	71	96.049	Monodelphis_domestica
ENSPCAG00000007564	CHD9	73	81.981	ENSMALG00000013306	chd9	72	79.800	Monopterus_albus
ENSPCAG00000007564	CHD9	86	93.658	MGP_CAROLIEiJ_G0031364	Chd9	77	93.658	Mus_caroli
ENSPCAG00000007564	CHD9	86	93.474	ENSMUSG00000056608	Chd9	99	92.593	Mus_musculus
ENSPCAG00000007564	CHD9	86	93.382	MGP_PahariEiJ_G0022964	Chd9	78	93.382	Mus_pahari
ENSPCAG00000007564	CHD9	86	93.474	MGP_SPRETEiJ_G0032483	Chd9	78	93.474	Mus_spretus
ENSPCAG00000007564	CHD9	86	96.639	ENSMPUG00000003285	CHD9	77	96.639	Mustela_putorius_furo
ENSPCAG00000007564	CHD9	86	95.037	ENSMLUG00000004456	CHD9	77	95.037	Myotis_lucifugus
ENSPCAG00000007564	CHD9	74	82.176	ENSNBRG00000009423	chd9	73	80.255	Neolamprologus_brichardi
ENSPCAG00000007564	CHD9	86	96.415	ENSNLEG00000001026	CHD9	86	96.415	Nomascus_leucogenys
ENSPCAG00000007564	CHD9	75	97.386	ENSMEUG00000008222	-	75	97.386	Notamacropus_eugenii
ENSPCAG00000007564	CHD9	73	97.196	ENSOPRG00000011168	CHD9	66	97.196	Ochotona_princeps
ENSPCAG00000007564	CHD9	86	95.404	ENSODEG00000004466	CHD9	77	95.404	Octodon_degus
ENSPCAG00000007564	CHD9	68	82.193	ENSONIG00000002816	chd9	80	80.346	Oreochromis_niloticus
ENSPCAG00000007564	CHD9	86	93.303	ENSOANG00000013401	CHD9	77	93.303	Ornithorhynchus_anatinus
ENSPCAG00000007564	CHD9	70	96.691	ENSOCUG00000001016	CHD9	74	96.691	Oryctolagus_cuniculus
ENSPCAG00000007564	CHD9	73	81.562	ENSORLG00000013810	chd9	72	79.599	Oryzias_latipes
ENSPCAG00000007564	CHD9	83	80.377	ENSORLG00020020665	chd9	72	78.539	Oryzias_latipes_hni
ENSPCAG00000007564	CHD9	83	79.288	ENSORLG00015019126	chd9	80	77.495	Oryzias_latipes_hsok
ENSPCAG00000007564	CHD9	53	78.301	ENSOMEG00000015978	chd9	92	77.405	Oryzias_melastigma
ENSPCAG00000007564	CHD9	86	96.048	ENSOGAG00000002110	CHD9	77	96.048	Otolemur_garnettii
ENSPCAG00000007564	CHD9	86	96.140	ENSOARG00000017664	CHD9	77	96.140	Ovis_aries
ENSPCAG00000007564	CHD9	70	94.552	ENSPPAG00000039388	-	75	94.645	Pan_paniscus
ENSPCAG00000007564	CHD9	86	96.415	ENSPPRG00000004801	CHD9	77	96.415	Panthera_pardus
ENSPCAG00000007564	CHD9	86	96.324	ENSPTIG00000021854	CHD9	77	96.324	Panthera_tigris_altaica
ENSPCAG00000007564	CHD9	86	96.415	ENSPTRG00000008113	CHD9	77	96.415	Pan_troglodytes
ENSPCAG00000007564	CHD9	86	96.415	ENSPANG00000019307	CHD9	77	96.415	Papio_anubis
ENSPCAG00000007564	CHD9	86	81.760	ENSPKIG00000021876	chd9	76	80.234	Paramormyrops_kingsleyae
ENSPCAG00000007564	CHD9	85	77.580	ENSPKIG00000025401	-	70	77.580	Paramormyrops_kingsleyae
ENSPCAG00000007564	CHD9	65	89.908	ENSPSIG00000008099	CHD9	90	89.908	Pelodiscus_sinensis
ENSPCAG00000007564	CHD9	50	76.845	ENSPMAG00000006035	-	74	76.845	Petromyzon_marinus
ENSPCAG00000007564	CHD9	85	93.578	ENSPCIG00000017215	CHD9	88	90.710	Phascolarctos_cinereus
ENSPCAG00000007564	CHD9	74	81.972	ENSPFOG00000015839	chd9	64	79.693	Poecilia_formosa
ENSPCAG00000007564	CHD9	74	81.972	ENSPLAG00000011118	chd9	68	79.910	Poecilia_latipinna
ENSPCAG00000007564	CHD9	74	81.073	ENSPMEG00000015106	chd9	63	78.733	Poecilia_mexicana
ENSPCAG00000007564	CHD9	74	82.298	ENSPREG00000006473	chd9	68	80.219	Poecilia_reticulata
ENSPCAG00000007564	CHD9	86	96.507	ENSPPYG00000007348	CHD9	77	96.507	Pongo_abelii
ENSPCAG00000007564	CHD9	86	96.415	ENSPCOG00000028433	CHD9	78	96.415	Propithecus_coquereli
ENSPCAG00000007564	CHD9	82	94.444	ENSPVAG00000015617	CHD9	74	94.444	Pteropus_vampyrus
ENSPCAG00000007564	CHD9	74	82.176	ENSPNYG00000010947	chd9	73	80.255	Pundamilia_nyererei
ENSPCAG00000007564	CHD9	73	82.170	ENSPNAG00000024141	chd9	74	80.237	Pygocentrus_nattereri
ENSPCAG00000007564	CHD9	86	92.647	ENSRNOG00000049302	Chd9	96	92.647	Rattus_norvegicus
ENSPCAG00000007564	CHD9	70	96.324	ENSRBIG00000035553	CHD9	75	96.324	Rhinopithecus_bieti
ENSPCAG00000007564	CHD9	69	96.526	ENSRROG00000033278	CHD9	75	96.526	Rhinopithecus_roxellana
ENSPCAG00000007564	CHD9	86	96.507	ENSSBOG00000030240	CHD9	77	96.507	Saimiri_boliviensis_boliviensis
ENSPCAG00000007564	CHD9	86	93.394	ENSSHAG00000002719	CHD9	77	93.394	Sarcophilus_harrisii
ENSPCAG00000007564	CHD9	86	81.118	ENSSFOG00015020209	chd9	72	81.118	Scleropages_formosus
ENSPCAG00000007564	CHD9	85	80.543	ENSSFOG00015001327	chd9	72	80.543	Scleropages_formosus
ENSPCAG00000007564	CHD9	73	80.733	ENSSMAG00000008953	chd9	90	80.416	Scophthalmus_maximus
ENSPCAG00000007564	CHD9	74	81.461	ENSSDUG00000006139	chd9	69	79.927	Seriola_dumerili
ENSPCAG00000007564	CHD9	83	81.056	ENSSLDG00000017818	chd9	73	78.837	Seriola_lalandi_dorsalis
ENSPCAG00000007564	CHD9	78	98.042	ENSSARG00000010632	CHD9	70	98.042	Sorex_araneus
ENSPCAG00000007564	CHD9	73	81.912	ENSSPAG00000021649	chd9	72	80.000	Stegastes_partitus
ENSPCAG00000007564	CHD9	74	96.296	ENSSSCG00000033591	CHD9	67	96.296	Sus_scrofa
ENSPCAG00000007564	CHD9	86	91.842	ENSTGUG00000007476	CHD9	86	91.842	Taeniopygia_guttata
ENSPCAG00000007564	CHD9	68	80.943	ENSTRUG00000009125	chd9	72	78.747	Takifugu_rubripes
ENSPCAG00000007564	CHD9	51	82.927	ENSTNIG00000003825	chd9	71	82.927	Tetraodon_nigroviridis
ENSPCAG00000007564	CHD9	64	95.066	ENSTBEG00000016052	-	70	95.066	Tupaia_belangeri
ENSPCAG00000007564	CHD9	86	95.798	ENSTTRG00000012674	CHD9	77	95.798	Tursiops_truncatus
ENSPCAG00000007564	CHD9	86	96.324	ENSUMAG00000004043	CHD9	91	96.324	Ursus_maritimus
ENSPCAG00000007564	CHD9	83	95.518	ENSVPAG00000001374	CHD9	74	95.518	Vicugna_pacos
ENSPCAG00000007564	CHD9	86	96.639	ENSVVUG00000019435	CHD9	77	96.639	Vulpes_vulpes
ENSPCAG00000007564	CHD9	86	86.972	ENSXETG00000000349	chd9	85	86.972	Xenopus_tropicalis
ENSPCAG00000007564	CHD9	68	82.298	ENSXCOG00000012997	chd9	68	79.819	Xiphophorus_couchianus
ENSPCAG00000007564	CHD9	74	81.878	ENSXMAG00000016192	chd9	68	82.066	Xiphophorus_maculatus