EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008019 (Gene tree)
Gene ID: -
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 6938 bases
Position: chrscaffold_13798:20347-27284
Accession: 17948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007500	CSD	PF00313.22	4.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008014	YBX2-201	1080	-	ENSPCAP00000007500	360 (aa)	-	UPI00018ADFEB

Gene Model

Click here to download ENSPCAG00000008019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008019	YBX2	84	88.636	ENSG00000006047	YBX2	99	85.185	Homo_sapiens
ENSPCAG00000008019	YBX2	54	88.776	ENSAMEG00000016564	YBX2	89	88.776	Ailuropoda_melanoleuca
ENSPCAG00000008019	YBX2	78	91.489	ENSANAG00000019540	YBX2	86	91.696	Aotus_nancymaae
ENSPCAG00000008019	YBX2	85	95.779	ENSBTAG00000009126	YBX2	85	95.752	Bos_taurus
ENSPCAG00000008019	YBX2	76	88.686	ENSCJAG00000042146	-	97	88.686	Callithrix_jacchus
ENSPCAG00000008019	YBX2	84	89.073	ENSCJAG00000016581	-	85	88.562	Callithrix_jacchus
ENSPCAG00000008019	YBX2	84	93.528	ENSCAFG00000016128	-	85	93.291	Canis_familiaris
ENSPCAG00000008019	YBX2	70	76.772	ENSCAFG00000005162	-	89	76.984	Canis_familiaris
ENSPCAG00000008019	YBX2	84	90.615	ENSCAFG00020008884	YBX2	85	90.415	Canis_lupus_dingo
ENSPCAG00000008019	YBX2	85	94.481	ENSCHIG00000016407	YBX2	85	94.444	Capra_hircus
ENSPCAG00000008019	YBX2	75	89.781	ENSTSYG00000030765	YBX2	92	89.781	Carlito_syrichta
ENSPCAG00000008019	YBX2	74	94.757	ENSCAPG00000011432	YBX2	100	94.757	Cavia_aperea
ENSPCAG00000008019	YBX2	84	94.702	ENSCPOG00000009543	YBX2	96	94.444	Cavia_porcellus
ENSPCAG00000008019	YBX2	84	92.715	ENSCCAG00000025671	YBX2	84	92.484	Cebus_capucinus
ENSPCAG00000008019	YBX2	84	91.722	ENSCATG00000036919	YBX2	85	91.503	Cercocebus_atys
ENSPCAG00000008019	YBX2	75	95.185	ENSCLAG00000010306	YBX2	96	95.185	Chinchilla_lanigera
ENSPCAG00000008019	YBX2	84	91.722	ENSCSAG00000011857	YBX2	85	91.503	Chlorocebus_sabaeus
ENSPCAG00000008019	YBX2	71	67.829	ENSCPBG00000022288	YBX2	81	66.667	Chrysemys_picta_bellii
ENSPCAG00000008019	YBX2	74	91.045	ENSCANG00000007129	YBX2	97	91.045	Colobus_angolensis_palliatus
ENSPCAG00000008019	YBX2	84	94.702	ENSCGRG00001000751	Ybx2	96	94.815	Cricetulus_griseus_chok1gshd
ENSPCAG00000008019	YBX2	74	94.796	ENSCGRG00000007683	Ybx2	99	94.444	Cricetulus_griseus_crigri
ENSPCAG00000008019	YBX2	75	93.333	ENSDNOG00000013746	YBX2	99	82.026	Dasypus_novemcinctus
ENSPCAG00000008019	YBX2	74	95.522	ENSDORG00000010882	Ybx2	95	95.522	Dipodomys_ordii
ENSPCAG00000008019	YBX2	83	89.262	ENSEASG00005018928	YBX2	85	89.262	Equus_asinus_asinus
ENSPCAG00000008019	YBX2	85	87.622	ENSECAG00000009996	YBX2	80	87.622	Equus_caballus
ENSPCAG00000008019	YBX2	82	95.960	ENSFCAG00000018097	YBX2	86	95.098	Felis_catus
ENSPCAG00000008019	YBX2	71	66.926	ENSGAGG00000016159	YBX2	90	70.037	Gopherus_agassizii
ENSPCAG00000008019	YBX2	84	90.066	ENSGGOG00000007399	YBX2	85	89.869	Gorilla_gorilla
ENSPCAG00000008019	YBX2	84	93.377	ENSHGLG00000014186	YBX2	85	93.137	Heterocephalus_glaber_female
ENSPCAG00000008019	YBX2	75	95.926	ENSSTOG00000008630	YBX2	99	95.926	Ictidomys_tridecemlineatus
ENSPCAG00000008019	YBX2	74	95.911	ENSJJAG00000013072	Ybx2	95	95.911	Jaculus_jaculus
ENSPCAG00000008019	YBX2	84	96.013	ENSLAFG00000014006	YBX2	85	95.738	Loxodonta_africana
ENSPCAG00000008019	YBX2	84	91.722	ENSMFAG00000039921	YBX2	85	91.503	Macaca_fascicularis
ENSPCAG00000008019	YBX2	84	91.722	ENSMNEG00000045221	YBX2	85	91.503	Macaca_nemestrina
ENSPCAG00000008019	YBX2	77	72.202	ENSMLEG00000029266	-	84	72.924	Mandrillus_leucophaeus
ENSPCAG00000008019	YBX2	87	82.911	ENSMLEG00000039452	YBX2	97	92.164	Mandrillus_leucophaeus
ENSPCAG00000008019	YBX2	84	94.702	ENSMAUG00000022062	Ybx2	85	94.444	Mesocricetus_auratus
ENSPCAG00000008019	YBX2	84	94.702	ENSMICG00000012453	YBX2	97	95.896	Microcebus_murinus
ENSPCAG00000008019	YBX2	84	94.702	ENSMOCG00000013958	Ybx2	96	95.556	Microtus_ochrogaster
ENSPCAG00000008019	YBX2	72	91.188	ENSMODG00000017596	YBX2	83	85.479	Monodelphis_domestica
ENSPCAG00000008019	YBX2	84	95.033	MGP_CAROLIEiJ_G0016606	Ybx2	96	95.556	Mus_caroli
ENSPCAG00000008019	YBX2	84	95.033	ENSMUSG00000018554	Ybx2	96	95.556	Mus_musculus
ENSPCAG00000008019	YBX2	84	95.033	MGP_PahariEiJ_G0017737	Ybx2	96	95.556	Mus_pahari
ENSPCAG00000008019	YBX2	84	95.033	MGP_SPRETEiJ_G0017442	Ybx2	96	95.556	Mus_spretus
ENSPCAG00000008019	YBX2	68	91.463	ENSMPUG00000010386	YBX2	93	91.463	Mustela_putorius_furo
ENSPCAG00000008019	YBX2	93	84.524	ENSMLUG00000004686	YBX2	91	86.928	Myotis_lucifugus
ENSPCAG00000008019	YBX2	84	93.377	ENSNGAG00000011707	Ybx2	86	93.137	Nannospalax_galili
ENSPCAG00000008019	YBX2	83	90.667	ENSNLEG00000008063	-	100	90.333	Nomascus_leucogenys
ENSPCAG00000008019	YBX2	77	87.726	ENSMEUG00000006947	YBX2	91	85.294	Notamacropus_eugenii
ENSPCAG00000008019	YBX2	80	89.310	ENSOPRG00000013773	YBX2	100	88.966	Ochotona_princeps
ENSPCAG00000008019	YBX2	84	93.046	ENSODEG00000017530	YBX2	96	93.704	Octodon_degus
ENSPCAG00000008019	YBX2	86	83.013	ENSOCUG00000015064	YBX2	98	83.388	Oryctolagus_cuniculus
ENSPCAG00000008019	YBX2	74	96.269	ENSOGAG00000004392	YBX2	100	96.269	Otolemur_garnettii
ENSPCAG00000008019	YBX2	79	91.497	ENSOARG00000011562	YBX2	83	91.497	Ovis_aries
ENSPCAG00000008019	YBX2	82	89.037	ENSPPAG00000041892	YBX2	100	89.037	Pan_paniscus
ENSPCAG00000008019	YBX2	84	92.739	ENSPPRG00000000782	YBX2	86	94.463	Panthera_pardus
ENSPCAG00000008019	YBX2	73	89.474	ENSPTRG00000051288	-	85	89.474	Pan_troglodytes
ENSPCAG00000008019	YBX2	84	88.636	ENSPTRG00000008673	YBX2	85	88.141	Pan_troglodytes
ENSPCAG00000008019	YBX2	77	70.290	ENSPANG00000032747	-	75	65.563	Papio_anubis
ENSPCAG00000008019	YBX2	83	91.639	ENSPANG00000024250	YBX2	85	91.176	Papio_anubis
ENSPCAG00000008019	YBX2	74	69.455	ENSPSIG00000012364	YBX2	99	72.727	Pelodiscus_sinensis
ENSPCAG00000008019	YBX2	77	82.310	ENSPCIG00000028819	YBX2	85	89.958	Phascolarctos_cinereus
ENSPCAG00000008019	YBX2	83	93.667	ENSPCOG00000006030	YBX2	85	93.137	Propithecus_coquereli
ENSPCAG00000008019	YBX2	85	84.142	ENSPVAG00000005050	YBX2	85	84.039	Pteropus_vampyrus
ENSPCAG00000008019	YBX2	84	94.702	ENSRNOG00000017117	Ybx2	85	94.444	Rattus_norvegicus
ENSPCAG00000008019	YBX2	84	91.391	ENSRBIG00000040919	YBX2	86	91.176	Rhinopithecus_bieti
ENSPCAG00000008019	YBX2	75	85.145	ENSRROG00000041728	YBX2	98	80.132	Rhinopithecus_roxellana
ENSPCAG00000008019	YBX2	83	85.667	ENSSBOG00000029566	YBX2	97	92.537	Saimiri_boliviensis_boliviensis
ENSPCAG00000008019	YBX2	77	86.429	ENSSHAG00000007786	YBX2	95	84.667	Sarcophilus_harrisii
ENSPCAG00000008019	YBX2	85	94.805	ENSSARG00000000488	YBX2	85	94.771	Sorex_araneus
ENSPCAG00000008019	YBX2	79	64.236	ENSSPUG00000018250	YBX2	99	68.512	Sphenodon_punctatus
ENSPCAG00000008019	YBX2	84	94.702	ENSSSCG00000017938	YBX2	85	94.444	Sus_scrofa
ENSPCAG00000008019	YBX2	83	91.973	ENSTBEG00000001266	YBX2	91	91.148	Tupaia_belangeri
ENSPCAG00000008019	YBX2	55	96.907	ENSTTRG00000009780	YBX2	57	96.040	Tursiops_truncatus
ENSPCAG00000008019	YBX2	72	89.850	ENSUAMG00000014725	YBX2	100	89.850	Ursus_americanus
ENSPCAG00000008019	YBX2	68	88.095	ENSUMAG00000015222	YBX2	90	88.095	Ursus_maritimus
ENSPCAG00000008019	YBX2	68	76.829	ENSVPAG00000003104	-	100	76.829	Vicugna_pacos
ENSPCAG00000008019	YBX2	72	89.179	ENSVVUG00000027830	-	100	89.179	Vulpes_vulpes
ENSPCAG00000008019	YBX2	70	79.921	ENSVVUG00000012111	-	78	83.071	Vulpes_vulpes