EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008025 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 59480 bases
Position: chrGeneScaffold_6240:39344-98823
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007547	Suf	PF05843.14	5.3e-58	1	2
ENSPCAP00000007547	Suf	PF05843.14	5.3e-58	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008065	-	2148	-	ENSPCAP00000007547	716 (aa)	-	UPI00018AF74C

Gene Model

Click here to download ENSPCAG00000008025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008025	-	71	100.000	ENSG00000176102	CSTF3	98	97.674	Homo_sapiens
ENSPCAG00000008025	-	71	95.819	ENSAPOG00000014054	cstf3	71	95.819	Acanthochromis_polyacanthus
ENSPCAG00000008025	-	70	100.000	ENSAMEG00000007187	CSTF3	69	100.000	Ailuropoda_melanoleuca
ENSPCAG00000008025	-	54	100.000	ENSACIG00000005539	cstf3	63	100.000	Amphilophus_citrinellus
ENSPCAG00000008025	-	71	95.819	ENSAOCG00000010930	cstf3	71	95.819	Amphiprion_ocellaris
ENSPCAG00000008025	-	71	95.819	ENSAPEG00000007903	cstf3	71	95.819	Amphiprion_percula
ENSPCAG00000008025	-	71	96.167	ENSATEG00000000190	cstf3	71	96.167	Anabas_testudineus
ENSPCAG00000008025	-	70	99.652	ENSAPLG00000007217	CSTF3	70	99.652	Anas_platyrhynchos
ENSPCAG00000008025	-	71	98.955	ENSACAG00000002823	CSTF3	71	98.955	Anolis_carolinensis
ENSPCAG00000008025	-	71	100.000	ENSANAG00000020699	CSTF3	79	100.000	Aotus_nancymaae
ENSPCAG00000008025	-	69	96.167	ENSACLG00000007820	cstf3	71	96.167	Astatotilapia_calliptera
ENSPCAG00000008025	-	71	96.864	ENSAMXG00000014198	cstf3	71	96.864	Astyanax_mexicanus
ENSPCAG00000008025	-	71	100.000	ENSBTAG00000008617	CSTF3	71	100.000	Bos_taurus
ENSPCAG00000008025	-	64	54.895	WBGene00006307	suf-1	62	54.895	Caenorhabditis_elegans
ENSPCAG00000008025	-	71	100.000	ENSCJAG00000005533	CSTF3	71	100.000	Callithrix_jacchus
ENSPCAG00000008025	-	71	100.000	ENSCAFG00000007264	CSTF3	71	100.000	Canis_familiaris
ENSPCAG00000008025	-	70	100.000	ENSCAFG00020002715	CSTF3	70	100.000	Canis_lupus_dingo
ENSPCAG00000008025	-	69	100.000	ENSCHIG00000016418	CSTF3	70	100.000	Capra_hircus
ENSPCAG00000008025	-	70	100.000	ENSTSYG00000000451	CSTF3	82	100.000	Carlito_syrichta
ENSPCAG00000008025	-	58	100.000	ENSCAPG00000010958	CSTF3	70	100.000	Cavia_aperea
ENSPCAG00000008025	-	71	100.000	ENSCPOG00000005545	CSTF3	71	100.000	Cavia_porcellus
ENSPCAG00000008025	-	71	100.000	ENSCCAG00000024790	CSTF3	79	100.000	Cebus_capucinus
ENSPCAG00000008025	-	71	100.000	ENSCATG00000007080	CSTF3	71	100.000	Cercocebus_atys
ENSPCAG00000008025	-	71	100.000	ENSCLAG00000016179	CSTF3	71	100.000	Chinchilla_lanigera
ENSPCAG00000008025	-	71	99.652	ENSCPBG00000006753	CSTF3	71	99.652	Chrysemys_picta_bellii
ENSPCAG00000008025	-	66	69.338	ENSCING00000006401	-	66	69.338	Ciona_intestinalis
ENSPCAG00000008025	-	66	66.899	ENSCSAVG00000004851	-	67	66.899	Ciona_savignyi
ENSPCAG00000008025	-	71	100.000	ENSCANG00000035468	CSTF3	71	100.000	Colobus_angolensis_palliatus
ENSPCAG00000008025	-	71	99.652	ENSCGRG00001014773	Cstf3	71	99.652	Cricetulus_griseus_chok1gshd
ENSPCAG00000008025	-	71	99.652	ENSCGRG00000004142	Cstf3	71	99.652	Cricetulus_griseus_crigri
ENSPCAG00000008025	-	71	96.516	ENSCSEG00000014283	cstf3	71	96.516	Cynoglossus_semilaevis
ENSPCAG00000008025	-	71	94.774	ENSCVAG00000019739	cstf3	71	94.774	Cyprinodon_variegatus
ENSPCAG00000008025	-	71	96.167	ENSDARG00000018904	cstf3	71	96.167	Danio_rerio
ENSPCAG00000008025	-	70	100.000	ENSDNOG00000007366	CSTF3	70	100.000	Dasypus_novemcinctus
ENSPCAG00000008025	-	70	99.029	ENSDORG00000005898	Cstf3	68	99.029	Dipodomys_ordii
ENSPCAG00000008025	-	65	67.832	FBgn0003559	su(f)	63	67.832	Drosophila_melanogaster
ENSPCAG00000008025	-	54	99.652	ENSETEG00000017097	CSTF3	54	99.652	Echinops_telfairi
ENSPCAG00000008025	-	60	75.926	ENSEBUG00000015459	cstf3	69	75.926	Eptatretus_burgeri
ENSPCAG00000008025	-	70	99.652	ENSEASG00005019884	CSTF3	80	99.620	Equus_asinus_asinus
ENSPCAG00000008025	-	70	99.652	ENSECAG00000023338	CSTF3	80	99.620	Equus_caballus
ENSPCAG00000008025	-	71	99.029	ENSEEUG00000015167	CSTF3	71	99.029	Erinaceus_europaeus
ENSPCAG00000008025	-	71	93.728	ENSELUG00000023393	cstf3	71	93.728	Esox_lucius
ENSPCAG00000008025	-	71	100.000	ENSFCAG00000030711	CSTF3	71	100.000	Felis_catus
ENSPCAG00000008025	-	70	99.303	ENSFALG00000010764	CSTF3	70	99.303	Ficedula_albicollis
ENSPCAG00000008025	-	71	100.000	ENSFDAG00000012082	CSTF3	71	100.000	Fukomys_damarensis
ENSPCAG00000008025	-	71	95.122	ENSFHEG00000020623	cstf3	71	95.122	Fundulus_heteroclitus
ENSPCAG00000008025	-	71	95.122	ENSGMOG00000012275	cstf3	71	95.122	Gadus_morhua
ENSPCAG00000008025	-	71	100.000	ENSGALG00000011685	CSTF3	71	100.000	Gallus_gallus
ENSPCAG00000008025	-	71	95.819	ENSGAFG00000002181	cstf3	71	95.819	Gambusia_affinis
ENSPCAG00000008025	-	70	95.122	ENSGACG00000015997	cstf3	70	95.122	Gasterosteus_aculeatus
ENSPCAG00000008025	-	70	99.652	ENSGAGG00000006200	CSTF3	70	99.652	Gopherus_agassizii
ENSPCAG00000008025	-	69	99.029	ENSGGOG00000026591	CSTF3	80	100.000	Gorilla_gorilla
ENSPCAG00000008025	-	69	96.167	ENSHBUG00000016656	cstf3	71	96.167	Haplochromis_burtoni
ENSPCAG00000008025	-	71	100.000	ENSHGLG00000017834	CSTF3	71	100.000	Heterocephalus_glaber_female
ENSPCAG00000008025	-	71	100.000	ENSHGLG00100018042	CSTF3	71	100.000	Heterocephalus_glaber_male
ENSPCAG00000008025	-	69	95.122	ENSHCOG00000015218	cstf3	71	95.122	Hippocampus_comes
ENSPCAG00000008025	-	71	96.864	ENSIPUG00000013170	CSTF3	71	96.864	Ictalurus_punctatus
ENSPCAG00000008025	-	71	100.000	ENSSTOG00000013306	CSTF3	71	100.000	Ictidomys_tridecemlineatus
ENSPCAG00000008025	-	70	99.644	ENSJJAG00000018430	Cstf3	77	99.644	Jaculus_jaculus
ENSPCAG00000008025	-	71	95.122	ENSKMAG00000010916	cstf3	70	95.122	Kryptolebias_marmoratus
ENSPCAG00000008025	-	70	95.470	ENSLBEG00000002306	cstf3	70	95.470	Labrus_bergylta
ENSPCAG00000008025	-	71	97.561	ENSLACG00000017296	CSTF3	71	97.561	Latimeria_chalumnae
ENSPCAG00000008025	-	71	95.819	ENSLOCG00000004415	cstf3	71	95.819	Lepisosteus_oculatus
ENSPCAG00000008025	-	71	100.000	ENSLAFG00000008712	CSTF3	71	100.000	Loxodonta_africana
ENSPCAG00000008025	-	71	100.000	ENSMFAG00000029516	CSTF3	79	100.000	Macaca_fascicularis
ENSPCAG00000008025	-	71	100.000	ENSMMUG00000002542	CSTF3	71	100.000	Macaca_mulatta
ENSPCAG00000008025	-	71	100.000	ENSMNEG00000021807	CSTF3	71	100.000	Macaca_nemestrina
ENSPCAG00000008025	-	71	100.000	ENSMLEG00000039594	CSTF3	81	100.000	Mandrillus_leucophaeus
ENSPCAG00000008025	-	71	95.819	ENSMAMG00000020423	cstf3	71	95.819	Mastacembelus_armatus
ENSPCAG00000008025	-	70	96.167	ENSMZEG00005012082	cstf3	71	96.167	Maylandia_zebra
ENSPCAG00000008025	-	71	100.000	ENSMGAG00000001383	CSTF3	71	100.000	Meleagris_gallopavo
ENSPCAG00000008025	-	71	99.303	ENSMAUG00000002487	Cstf3	71	99.303	Mesocricetus_auratus
ENSPCAG00000008025	-	71	100.000	ENSMICG00000004784	CSTF3	71	100.000	Microcebus_murinus
ENSPCAG00000008025	-	71	99.652	ENSMOCG00000017583	Cstf3	71	99.652	Microtus_ochrogaster
ENSPCAG00000008025	-	70	95.470	ENSMMOG00000016026	cstf3	67	95.470	Mola_mola
ENSPCAG00000008025	-	71	91.289	ENSMODG00000025205	-	71	91.289	Monodelphis_domestica
ENSPCAG00000008025	-	71	100.000	ENSMODG00000009745	-	71	100.000	Monodelphis_domestica
ENSPCAG00000008025	-	71	95.819	ENSMALG00000012050	cstf3	71	95.819	Monopterus_albus
ENSPCAG00000008025	-	71	99.652	MGP_CAROLIEiJ_G0024026	Cstf3	71	99.652	Mus_caroli
ENSPCAG00000008025	-	71	99.652	ENSMUSG00000027176	Cstf3	71	99.652	Mus_musculus
ENSPCAG00000008025	-	71	99.652	MGP_PahariEiJ_G0025464	Cstf3	71	99.652	Mus_pahari
ENSPCAG00000008025	-	71	99.652	MGP_SPRETEiJ_G0024939	Cstf3	71	99.652	Mus_spretus
ENSPCAG00000008025	-	71	100.000	ENSMPUG00000011457	CSTF3	71	100.000	Mustela_putorius_furo
ENSPCAG00000008025	-	71	98.606	ENSMLUG00000026022	-	71	98.606	Myotis_lucifugus
ENSPCAG00000008025	-	70	100.000	ENSMLUG00000003073	-	70	100.000	Myotis_lucifugus
ENSPCAG00000008025	-	71	99.652	ENSNGAG00000010677	Cstf3	71	99.652	Nannospalax_galili
ENSPCAG00000008025	-	58	100.000	ENSNBRG00000007345	cstf3	66	100.000	Neolamprologus_brichardi
ENSPCAG00000008025	-	71	100.000	ENSNLEG00000017901	CSTF3	80	100.000	Nomascus_leucogenys
ENSPCAG00000008025	-	53	97.674	ENSOPRG00000000199	-	53	97.674	Ochotona_princeps
ENSPCAG00000008025	-	71	100.000	ENSODEG00000016737	-	71	100.000	Octodon_degus
ENSPCAG00000008025	-	60	100.000	ENSODEG00000006311	-	65	100.000	Octodon_degus
ENSPCAG00000008025	-	69	96.167	ENSONIG00000005563	cstf3	71	96.167	Oreochromis_niloticus
ENSPCAG00000008025	-	59	100.000	ENSOANG00000015140	CSTF3	65	100.000	Ornithorhynchus_anatinus
ENSPCAG00000008025	-	71	100.000	ENSOCUG00000015417	CSTF3	71	100.000	Oryctolagus_cuniculus
ENSPCAG00000008025	-	71	94.425	ENSORLG00000009762	cstf3	71	94.425	Oryzias_latipes
ENSPCAG00000008025	-	71	94.425	ENSORLG00020005540	cstf3	71	94.425	Oryzias_latipes_hni
ENSPCAG00000008025	-	71	94.425	ENSORLG00015003551	cstf3	71	94.425	Oryzias_latipes_hsok
ENSPCAG00000008025	-	70	94.425	ENSOMEG00000003848	cstf3	71	94.425	Oryzias_melastigma
ENSPCAG00000008025	-	71	99.029	ENSOGAG00000010229	CSTF3	71	99.029	Otolemur_garnettii
ENSPCAG00000008025	-	59	100.000	ENSOARG00000017271	CSTF3	65	100.000	Ovis_aries
ENSPCAG00000008025	-	70	100.000	ENSPPAG00000027358	CSTF3	70	100.000	Pan_paniscus
ENSPCAG00000008025	-	71	100.000	ENSPPRG00000016852	CSTF3	71	100.000	Panthera_pardus
ENSPCAG00000008025	-	71	100.000	ENSPTIG00000008716	CSTF3	71	100.000	Panthera_tigris_altaica
ENSPCAG00000008025	-	71	100.000	ENSPTRG00000003485	CSTF3	71	100.000	Pan_troglodytes
ENSPCAG00000008025	-	71	100.000	ENSPANG00000013722	CSTF3	81	100.000	Papio_anubis
ENSPCAG00000008025	-	71	94.774	ENSPKIG00000023648	cstf3	71	94.774	Paramormyrops_kingsleyae
ENSPCAG00000008025	-	71	99.303	ENSPSIG00000009173	CSTF3	71	99.303	Pelodiscus_sinensis
ENSPCAG00000008025	-	57	94.774	ENSPMGG00000000164	cstf3	74	94.774	Periophthalmus_magnuspinnatus
ENSPCAG00000008025	-	71	99.652	ENSPEMG00000011481	Cstf3	71	99.652	Peromyscus_maniculatus_bairdii
ENSPCAG00000008025	-	71	89.619	ENSPMAG00000007282	cstf3	71	89.619	Petromyzon_marinus
ENSPCAG00000008025	-	68	98.885	ENSPCIG00000026406	-	67	100.000	Phascolarctos_cinereus
ENSPCAG00000008025	-	80	72.088	ENSPCIG00000030419	-	72	72.088	Phascolarctos_cinereus
ENSPCAG00000008025	-	71	95.819	ENSPFOG00000017239	cstf3	71	95.819	Poecilia_formosa
ENSPCAG00000008025	-	71	95.819	ENSPLAG00000009456	cstf3	71	95.819	Poecilia_latipinna
ENSPCAG00000008025	-	71	95.819	ENSPMEG00000010320	cstf3	71	95.819	Poecilia_mexicana
ENSPCAG00000008025	-	71	95.819	ENSPREG00000013549	cstf3	71	95.819	Poecilia_reticulata
ENSPCAG00000008025	-	71	100.000	ENSPPYG00000003375	CSTF3	71	100.000	Pongo_abelii
ENSPCAG00000008025	-	70	99.029	ENSPCOG00000014417	CSTF3	71	99.029	Propithecus_coquereli
ENSPCAG00000008025	-	71	100.000	ENSPVAG00000002350	CSTF3	71	100.000	Pteropus_vampyrus
ENSPCAG00000008025	-	70	96.167	ENSPNYG00000018259	cstf3	71	96.167	Pundamilia_nyererei
ENSPCAG00000008025	-	71	96.864	ENSPNAG00000020182	cstf3	71	96.864	Pygocentrus_nattereri
ENSPCAG00000008025	-	58	100.000	ENSRNOG00000012089	Cstf3	67	100.000	Rattus_norvegicus
ENSPCAG00000008025	-	70	100.000	ENSRBIG00000044258	CSTF3	70	100.000	Rhinopithecus_bieti
ENSPCAG00000008025	-	71	100.000	ENSRROG00000043450	CSTF3	71	100.000	Rhinopithecus_roxellana
ENSPCAG00000008025	-	71	100.000	ENSSBOG00000024764	CSTF3	81	100.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000008025	-	80	75.604	ENSSHAG00000003135	-	79	75.604	Sarcophilus_harrisii
ENSPCAG00000008025	-	71	100.000	ENSSHAG00000018128	-	71	100.000	Sarcophilus_harrisii
ENSPCAG00000008025	-	71	95.470	ENSSFOG00015022133	cstf3	71	95.470	Scleropages_formosus
ENSPCAG00000008025	-	71	95.122	ENSSMAG00000002197	cstf3	75	95.122	Scophthalmus_maximus
ENSPCAG00000008025	-	71	95.819	ENSSDUG00000020426	cstf3	71	95.819	Seriola_dumerili
ENSPCAG00000008025	-	71	95.819	ENSSLDG00000025649	cstf3	71	95.819	Seriola_lalandi_dorsalis
ENSPCAG00000008025	-	71	99.652	ENSSARG00000000391	CSTF3	71	99.652	Sorex_araneus
ENSPCAG00000008025	-	67	99.652	ENSSPUG00000010546	CSTF3	70	99.652	Sphenodon_punctatus
ENSPCAG00000008025	-	71	95.819	ENSSPAG00000004958	cstf3	71	95.819	Stegastes_partitus
ENSPCAG00000008025	-	71	100.000	ENSSSCG00000040954	CSTF3	71	100.000	Sus_scrofa
ENSPCAG00000008025	-	70	99.303	ENSTGUG00000005010	CSTF3	70	99.303	Taeniopygia_guttata
ENSPCAG00000008025	-	71	94.077	ENSTRUG00000004959	cstf3	71	94.077	Takifugu_rubripes
ENSPCAG00000008025	-	70	94.425	ENSTNIG00000013811	cstf3	70	94.425	Tetraodon_nigroviridis
ENSPCAG00000008025	-	56	100.000	ENSTBEG00000001544	CSTF3	57	100.000	Tupaia_belangeri
ENSPCAG00000008025	-	71	99.029	ENSTTRG00000016366	CSTF3	71	99.029	Tursiops_truncatus
ENSPCAG00000008025	-	70	99.652	ENSUMAG00000018971	CSTF3	70	99.652	Ursus_maritimus
ENSPCAG00000008025	-	71	99.652	ENSVPAG00000007800	CSTF3	71	99.652	Vicugna_pacos
ENSPCAG00000008025	-	70	100.000	ENSVVUG00000014938	CSTF3	70	100.000	Vulpes_vulpes
ENSPCAG00000008025	-	59	93.750	ENSXETG00000021399	cstf3	69	93.750	Xenopus_tropicalis
ENSPCAG00000008025	-	58	96.154	ENSXCOG00000011741	cstf3	66	96.154	Xiphophorus_couchianus
ENSPCAG00000008025	-	71	95.819	ENSXMAG00000009545	cstf3	71	95.819	Xiphophorus_maculatus