EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000008260 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 97296 bases
Position: chrGeneScaffold_1024:3283-100578
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007791	Ago_hook	PF10427.9	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008332	TNRC6A-201	5949	-	ENSPCAP00000007791	1982 (aa)	-	UPI00018AF84E

Gene Model

Click here to download ENSPCAG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000008260	TNRC6A	66	46.835	ENSPCAG00000012510	TNRC6C	76	47.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008260	TNRC6A	94	100.000	ENSG00000090905	TNRC6A	95	100.000	Homo_sapiens
ENSPCAG00000008260	TNRC6A	92	100.000	ENSAMEG00000009333	TNRC6A	95	100.000	Ailuropoda_melanoleuca
ENSPCAG00000008260	TNRC6A	91	87.629	ENSAPLG00000009978	TNRC6A	95	87.629	Anas_platyrhynchos
ENSPCAG00000008260	TNRC6A	89	50.271	ENSACAG00000011857	TNRC6A	95	51.760	Anolis_carolinensis
ENSPCAG00000008260	TNRC6A	94	100.000	ENSANAG00000025252	TNRC6A	95	100.000	Aotus_nancymaae
ENSPCAG00000008260	TNRC6A	82	82.051	ENSAMXG00000019919	tnrc6a	91	82.051	Astyanax_mexicanus
ENSPCAG00000008260	TNRC6A	94	98.969	ENSBTAG00000017999	TNRC6A	95	98.969	Bos_taurus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCJAG00000020677	TNRC6A	95	100.000	Callithrix_jacchus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCAFG00000017531	TNRC6A	95	100.000	Canis_familiaris
ENSPCAG00000008260	TNRC6A	93	100.000	ENSCAFG00020021160	TNRC6A	94	100.000	Canis_lupus_dingo
ENSPCAG00000008260	TNRC6A	94	93.814	ENSCHIG00000019448	TNRC6A	94	98.148	Capra_hircus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSTSYG00000012711	TNRC6A	95	100.000	Carlito_syrichta
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCPOG00000036684	TNRC6A	95	100.000	Cavia_porcellus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCCAG00000033664	TNRC6A	95	100.000	Cebus_capucinus
ENSPCAG00000008260	TNRC6A	93	100.000	ENSCATG00000019284	TNRC6A	95	100.000	Cercocebus_atys
ENSPCAG00000008260	TNRC6A	94	84.536	ENSCLAG00000010217	TNRC6A	95	84.536	Chinchilla_lanigera
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCSAG00000006561	TNRC6A	95	100.000	Chlorocebus_sabaeus
ENSPCAG00000008260	TNRC6A	90	98.969	ENSCHOG00000009374	TNRC6A	90	98.969	Choloepus_hoffmanni
ENSPCAG00000008260	TNRC6A	85	87.629	ENSCPBG00000001881	TNRC6A	94	87.629	Chrysemys_picta_bellii
ENSPCAG00000008260	TNRC6A	94	100.000	ENSCANG00000041549	TNRC6A	95	100.000	Colobus_angolensis_palliatus
ENSPCAG00000008260	TNRC6A	94	98.969	ENSCGRG00001015021	Tnrc6a	95	98.969	Cricetulus_griseus_chok1gshd
ENSPCAG00000008260	TNRC6A	94	98.969	ENSCGRG00000013351	Tnrc6a	95	98.969	Cricetulus_griseus_crigri
ENSPCAG00000008260	TNRC6A	82	81.818	ENSDARG00000079688	tnrc6a	91	81.818	Danio_rerio
ENSPCAG00000008260	TNRC6A	92	100.000	ENSDNOG00000013989	TNRC6A	94	100.000	Dasypus_novemcinctus
ENSPCAG00000008260	TNRC6A	87	100.000	ENSETEG00000014658	TNRC6A	89	100.000	Echinops_telfairi
ENSPCAG00000008260	TNRC6A	94	97.938	ENSEASG00005017693	TNRC6A	95	98.148	Equus_asinus_asinus
ENSPCAG00000008260	TNRC6A	94	96.907	ENSECAG00000025056	TNRC6A	95	98.148	Equus_caballus
ENSPCAG00000008260	TNRC6A	92	97.938	ENSEEUG00000004530	TNRC6A	94	97.938	Erinaceus_europaeus
ENSPCAG00000008260	TNRC6A	94	96.907	ENSFCAG00000025236	TNRC6A	95	96.907	Felis_catus
ENSPCAG00000008260	TNRC6A	94	88.660	ENSFALG00000003757	TNRC6A	94	88.660	Ficedula_albicollis
ENSPCAG00000008260	TNRC6A	85	87.629	ENSGALG00000006068	TNRC6A	94	87.629	Gallus_gallus
ENSPCAG00000008260	TNRC6A	85	87.629	ENSGAGG00000023209	TNRC6A	94	87.629	Gopherus_agassizii
ENSPCAG00000008260	TNRC6A	94	100.000	ENSGGOG00000005137	TNRC6A	95	100.000	Gorilla_gorilla
ENSPCAG00000008260	TNRC6A	94	82.474	ENSHGLG00000007368	-	95	82.474	Heterocephalus_glaber_female
ENSPCAG00000008260	TNRC6A	94	98.969	ENSHGLG00000012474	-	95	98.969	Heterocephalus_glaber_female
ENSPCAG00000008260	TNRC6A	94	98.925	ENSHGLG00100012496	-	95	98.925	Heterocephalus_glaber_male
ENSPCAG00000008260	TNRC6A	94	100.000	ENSSTOG00000023394	TNRC6A	94	100.000	Ictidomys_tridecemlineatus
ENSPCAG00000008260	TNRC6A	91	79.381	ENSLACG00000006277	TNRC6A	93	79.381	Latimeria_chalumnae
ENSPCAG00000008260	TNRC6A	92	89.744	ENSLOCG00000005517	tnrc6a	91	89.172	Lepisosteus_oculatus
ENSPCAG00000008260	TNRC6A	92	100.000	ENSLAFG00000004209	TNRC6A	95	100.000	Loxodonta_africana
ENSPCAG00000008260	TNRC6A	91	100.000	ENSMFAG00000003824	TNRC6A	94	100.000	Macaca_fascicularis
ENSPCAG00000008260	TNRC6A	94	100.000	ENSMMUG00000020428	TNRC6A	95	100.000	Macaca_mulatta
ENSPCAG00000008260	TNRC6A	94	100.000	ENSMNEG00000034854	TNRC6A	95	100.000	Macaca_nemestrina
ENSPCAG00000008260	TNRC6A	95	100.000	ENSMLEG00000042737	TNRC6A	92	100.000	Mandrillus_leucophaeus
ENSPCAG00000008260	TNRC6A	91	95.541	ENSMGAG00000006455	TNRC6A	86	95.541	Meleagris_gallopavo
ENSPCAG00000008260	TNRC6A	94	100.000	ENSMAUG00000012750	Tnrc6a	96	100.000	Mesocricetus_auratus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSMICG00000030685	TNRC6A	95	100.000	Microcebus_murinus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSMOCG00000000152	Tnrc6a	95	100.000	Microtus_ochrogaster
ENSPCAG00000008260	TNRC6A	94	88.660	ENSMODG00000016348	TNRC6A	92	88.660	Monodelphis_domestica
ENSPCAG00000008260	TNRC6A	93	97.938	MGP_CAROLIEiJ_G0030425	Tnrc6a	95	97.938	Mus_caroli
ENSPCAG00000008260	TNRC6A	94	96.907	ENSMUSG00000052707	Tnrc6a	95	96.907	Mus_musculus
ENSPCAG00000008260	TNRC6A	93	97.938	MGP_PahariEiJ_G0013635	Tnrc6a	95	97.938	Mus_pahari
ENSPCAG00000008260	TNRC6A	94	96.907	MGP_SPRETEiJ_G0031539	Tnrc6a	95	96.907	Mus_spretus
ENSPCAG00000008260	TNRC6A	86	100.000	ENSMPUG00000012324	TNRC6A	88	100.000	Mustela_putorius_furo
ENSPCAG00000008260	TNRC6A	91	94.845	ENSMLUG00000002701	TNRC6A	95	94.845	Myotis_lucifugus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSNGAG00000020702	Tnrc6a	95	100.000	Nannospalax_galili
ENSPCAG00000008260	TNRC6A	92	100.000	ENSNLEG00000011851	TNRC6A	94	100.000	Nomascus_leucogenys
ENSPCAG00000008260	TNRC6A	72	88.660	ENSMEUG00000015959	-	72	88.660	Notamacropus_eugenii
ENSPCAG00000008260	TNRC6A	87	100.000	ENSOPRG00000005819	TNRC6A	88	100.000	Ochotona_princeps
ENSPCAG00000008260	TNRC6A	93	91.753	ENSODEG00000012802	TNRC6A	94	91.753	Octodon_degus
ENSPCAG00000008260	TNRC6A	81	88.660	ENSOANG00000007672	TNRC6A	94	88.660	Ornithorhynchus_anatinus
ENSPCAG00000008260	TNRC6A	91	100.000	ENSOCUG00000004325	TNRC6A	95	100.000	Oryctolagus_cuniculus
ENSPCAG00000008260	TNRC6A	93	100.000	ENSOGAG00000006666	TNRC6A	95	100.000	Otolemur_garnettii
ENSPCAG00000008260	TNRC6A	93	98.969	ENSOARG00000017950	TNRC6A	95	98.969	Ovis_aries
ENSPCAG00000008260	TNRC6A	94	98.969	ENSPPAG00000028379	TNRC6A	95	98.969	Pan_paniscus
ENSPCAG00000008260	TNRC6A	94	96.907	ENSPPRG00000005861	TNRC6A	95	96.907	Panthera_pardus
ENSPCAG00000008260	TNRC6A	94	96.907	ENSPTIG00000006346	TNRC6A	95	96.907	Panthera_tigris_altaica
ENSPCAG00000008260	TNRC6A	94	100.000	ENSPTRG00000007898	TNRC6A	94	100.000	Pan_troglodytes
ENSPCAG00000008260	TNRC6A	94	100.000	ENSPANG00000018523	TNRC6A	95	100.000	Papio_anubis
ENSPCAG00000008260	TNRC6A	76	87.952	ENSPKIG00000012859	tnrc6a	85	87.952	Paramormyrops_kingsleyae
ENSPCAG00000008260	TNRC6A	66	93.694	ENSPSIG00000003965	TNRC6A	89	93.694	Pelodiscus_sinensis
ENSPCAG00000008260	TNRC6A	94	100.000	ENSPEMG00000016318	Tnrc6a	95	100.000	Peromyscus_maniculatus_bairdii
ENSPCAG00000008260	TNRC6A	92	88.660	ENSPCIG00000012106	TNRC6A	95	88.660	Phascolarctos_cinereus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSPPYG00000007202	TNRC6A	95	100.000	Pongo_abelii
ENSPCAG00000008260	TNRC6A	89	100.000	ENSPCOG00000010134	TNRC6A	92	100.000	Propithecus_coquereli
ENSPCAG00000008260	TNRC6A	88	65.753	ENSPVAG00000012066	TNRC6A	99	66.324	Pteropus_vampyrus
ENSPCAG00000008260	TNRC6A	94	100.000	ENSRNOG00000024737	Tnrc6a	95	100.000	Rattus_norvegicus
ENSPCAG00000008260	TNRC6A	92	100.000	ENSRBIG00000014222	TNRC6A	94	100.000	Rhinopithecus_bieti
ENSPCAG00000008260	TNRC6A	94	100.000	ENSRROG00000032360	TNRC6A	95	100.000	Rhinopithecus_roxellana
ENSPCAG00000008260	TNRC6A	92	100.000	ENSSBOG00000036197	TNRC6A	95	100.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000008260	TNRC6A	85	88.660	ENSSHAG00000008811	TNRC6A	92	88.660	Sarcophilus_harrisii
ENSPCAG00000008260	TNRC6A	82	88.462	ENSSFOG00015008920	tnrc6a	91	88.462	Scleropages_formosus
ENSPCAG00000008260	TNRC6A	66	88.132	ENSSARG00000002479	TNRC6A	83	88.132	Sorex_araneus
ENSPCAG00000008260	TNRC6A	84	80.612	ENSSPUG00000010525	TNRC6A	94	80.612	Sphenodon_punctatus
ENSPCAG00000008260	TNRC6A	94	98.969	ENSSSCG00000038870	TNRC6A	95	98.969	Sus_scrofa
ENSPCAG00000008260	TNRC6A	94	87.629	ENSTGUG00000006142	TNRC6A	95	87.629	Taeniopygia_guttata
ENSPCAG00000008260	TNRC6A	87	100.000	ENSTBEG00000014965	TNRC6A	90	100.000	Tupaia_belangeri
ENSPCAG00000008260	TNRC6A	89	95.876	ENSTTRG00000002008	TNRC6A	89	95.876	Tursiops_truncatus
ENSPCAG00000008260	TNRC6A	76	89.243	ENSUAMG00000006656	-	89	89.177	Ursus_americanus
ENSPCAG00000008260	TNRC6A	93	100.000	ENSUMAG00000008274	TNRC6A	94	100.000	Ursus_maritimus
ENSPCAG00000008260	TNRC6A	51	98.969	ENSVPAG00000010764	-	52	98.969	Vicugna_pacos
ENSPCAG00000008260	TNRC6A	93	100.000	ENSVVUG00000005380	TNRC6A	95	100.000	Vulpes_vulpes
ENSPCAG00000008260	TNRC6A	88	72.826	ENSXETG00000030437	TNRC6A	94	72.826	Xenopus_tropicalis