EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008360 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 38845 bases
Position: chrGeneScaffold_2254:14294-53138
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007912	EST1	PF10374.9	5.5e-17	1	1
ENSPCAP00000007912	EST1_DNA_bind	PF10373.9	4.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008468	SMG7-201	3447	-	ENSPCAP00000007912	1148 (aa)	-	UPI00018AFC4F

Gene Model

Click here to download ENSPCAG00000008360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008360	SMG7	100	84.024	ENSG00000116698	SMG7	98	84.024	Homo_sapiens
ENSPCAG00000008360	SMG7	60	75.439	ENSAPOG00000009611	smg7	64	84.000	Acanthochromis_polyacanthus
ENSPCAG00000008360	SMG7	88	88.362	ENSAMEG00000002357	SMG7	91	87.810	Ailuropoda_melanoleuca
ENSPCAG00000008360	SMG7	80	71.558	ENSACIG00000015152	smg7	83	71.558	Amphilophus_citrinellus
ENSPCAG00000008360	SMG7	86	73.304	ENSAOCG00000013538	smg7	84	73.304	Amphiprion_ocellaris
ENSPCAG00000008360	SMG7	86	73.085	ENSAPEG00000007851	smg7	84	73.085	Amphiprion_percula
ENSPCAG00000008360	SMG7	86	72.149	ENSATEG00000006931	smg7	83	72.149	Anabas_testudineus
ENSPCAG00000008360	SMG7	94	72.007	ENSAPLG00000015811	SMG7	95	72.007	Anas_platyrhynchos
ENSPCAG00000008360	SMG7	88	83.621	ENSACAG00000014989	SMG7	90	83.621	Anolis_carolinensis
ENSPCAG00000008360	SMG7	99	83.713	ENSANAG00000028114	SMG7	98	83.304	Aotus_nancymaae
ENSPCAG00000008360	SMG7	86	72.648	ENSACLG00000022079	smg7	84	72.648	Astatotilapia_calliptera
ENSPCAG00000008360	SMG7	88	74.945	ENSAMXG00000020809	smg7	89	74.945	Astyanax_mexicanus
ENSPCAG00000008360	SMG7	94	84.594	ENSBTAG00000008003	SMG7	93	84.594	Bos_taurus
ENSPCAG00000008360	SMG7	100	83.578	ENSCJAG00000005135	SMG7	98	83.578	Callithrix_jacchus
ENSPCAG00000008360	SMG7	94	85.332	ENSCAFG00000013276	SMG7	93	85.517	Canis_familiaris
ENSPCAG00000008360	SMG7	94	85.332	ENSCAFG00020015475	SMG7	90	88.578	Canis_lupus_dingo
ENSPCAG00000008360	SMG7	94	84.594	ENSCHIG00000018192	SMG7	95	84.594	Capra_hircus
ENSPCAG00000008360	SMG7	100	83.377	ENSTSYG00000002667	SMG7	98	83.377	Carlito_syrichta
ENSPCAG00000008360	SMG7	94	84.779	ENSCPOG00000008906	SMG7	95	84.963	Cavia_porcellus
ENSPCAG00000008360	SMG7	92	81.695	ENSCCAG00000028596	SMG7	97	81.695	Cebus_capucinus
ENSPCAG00000008360	SMG7	94	85.793	ENSCATG00000011063	SMG7	97	81.966	Cercocebus_atys
ENSPCAG00000008360	SMG7	94	84.502	ENSCLAG00000010751	SMG7	95	84.502	Chinchilla_lanigera
ENSPCAG00000008360	SMG7	94	85.609	ENSCSAG00000012654	SMG7	93	85.609	Chlorocebus_sabaeus
ENSPCAG00000008360	SMG7	95	76.186	ENSCHOG00000010522	SMG7	98	76.551	Choloepus_hoffmanni
ENSPCAG00000008360	SMG7	88	85.345	ENSCPBG00000015724	SMG7	89	85.996	Chrysemys_picta_bellii
ENSPCAG00000008360	SMG7	92	81.876	ENSCANG00000015680	SMG7	97	81.876	Colobus_angolensis_palliatus
ENSPCAG00000008360	SMG7	94	84.410	ENSCGRG00001013705	Smg7	95	84.410	Cricetulus_griseus_chok1gshd
ENSPCAG00000008360	SMG7	94	84.410	ENSCGRG00000018401	Smg7	94	84.410	Cricetulus_griseus_crigri
ENSPCAG00000008360	SMG7	86	69.913	ENSCVAG00000011842	smg7	96	61.963	Cyprinodon_variegatus
ENSPCAG00000008360	SMG7	86	74.781	ENSDARG00000060767	smg7	84	74.781	Danio_rerio
ENSPCAG00000008360	SMG7	94	84.410	ENSDORG00000007331	Smg7	95	84.410	Dipodomys_ordii
ENSPCAG00000008360	SMG7	94	84.779	ENSETEG00000002654	SMG7	98	84.779	Echinops_telfairi
ENSPCAG00000008360	SMG7	94	85.701	ENSEASG00005006524	SMG7	95	85.701	Equus_asinus_asinus
ENSPCAG00000008360	SMG7	94	85.793	ENSECAG00000004313	SMG7	90	91.223	Equus_caballus
ENSPCAG00000008360	SMG7	100	82.582	ENSEEUG00000002024	SMG7	98	82.582	Erinaceus_europaeus
ENSPCAG00000008360	SMG7	86	74.123	ENSELUG00000010293	smg7	88	74.123	Esox_lucius
ENSPCAG00000008360	SMG7	100	82.872	ENSFCAG00000010900	SMG7	95	91.875	Felis_catus
ENSPCAG00000008360	SMG7	94	72.647	ENSFALG00000003047	SMG7	96	72.647	Ficedula_albicollis
ENSPCAG00000008360	SMG7	94	84.594	ENSFDAG00000012121	SMG7	95	84.594	Fukomys_damarensis
ENSPCAG00000008360	SMG7	86	69.130	ENSFHEG00000011073	smg7	83	69.130	Fundulus_heteroclitus
ENSPCAG00000008360	SMG7	79	68.737	ENSGMOG00000004916	smg7	84	68.737	Gadus_morhua
ENSPCAG00000008360	SMG7	88	85.345	ENSGALG00000004667	SMG7	89	85.345	Gallus_gallus
ENSPCAG00000008360	SMG7	88	69.717	ENSGAFG00000019000	smg7	89	69.717	Gambusia_affinis
ENSPCAG00000008360	SMG7	88	70.524	ENSGACG00000001634	smg7	91	70.524	Gasterosteus_aculeatus
ENSPCAG00000008360	SMG7	94	85.701	ENSGGOG00000002342	SMG7	97	81.876	Gorilla_gorilla
ENSPCAG00000008360	SMG7	86	72.648	ENSHBUG00000003726	smg7	86	72.648	Haplochromis_burtoni
ENSPCAG00000008360	SMG7	94	84.686	ENSHGLG00000009353	SMG7	97	84.686	Heterocephalus_glaber_female
ENSPCAG00000008360	SMG7	95	77.828	ENSHGLG00100004878	-	96	77.828	Heterocephalus_glaber_male
ENSPCAG00000008360	SMG7	94	84.686	ENSHGLG00100009637	-	96	84.686	Heterocephalus_glaber_male
ENSPCAG00000008360	SMG7	86	74.836	ENSIPUG00000016997	smg7	84	74.836	Ictalurus_punctatus
ENSPCAG00000008360	SMG7	94	85.609	ENSSTOG00000000401	SMG7	95	85.609	Ictidomys_tridecemlineatus
ENSPCAG00000008360	SMG7	88	91.187	ENSJJAG00000012351	Smg7	89	91.187	Jaculus_jaculus
ENSPCAG00000008360	SMG7	85	64.523	ENSKMAG00000004900	smg7	81	64.967	Kryptolebias_marmoratus
ENSPCAG00000008360	SMG7	86	72.331	ENSLBEG00000002983	smg7	83	72.331	Labrus_bergylta
ENSPCAG00000008360	SMG7	88	77.538	ENSLACG00000000972	SMG7	90	77.538	Latimeria_chalumnae
ENSPCAG00000008360	SMG7	86	69.147	ENSLOCG00000002010	smg7	84	69.147	Lepisosteus_oculatus
ENSPCAG00000008360	SMG7	94	86.162	ENSLAFG00000008186	SMG7	95	86.162	Loxodonta_africana
ENSPCAG00000008360	SMG7	94	85.793	ENSMFAG00000031653	SMG7	95	85.793	Macaca_fascicularis
ENSPCAG00000008360	SMG7	100	84.024	ENSMMUG00000018458	SMG7	98	84.024	Macaca_mulatta
ENSPCAG00000008360	SMG7	92	81.966	ENSMNEG00000034798	SMG7	97	81.966	Macaca_nemestrina
ENSPCAG00000008360	SMG7	94	85.793	ENSMLEG00000037170	SMG7	97	81.966	Mandrillus_leucophaeus
ENSPCAG00000008360	SMG7	78	72.807	ENSMAMG00000018733	smg7	73	72.807	Mastacembelus_armatus
ENSPCAG00000008360	SMG7	86	72.648	ENSMZEG00005015247	smg7	84	72.648	Maylandia_zebra
ENSPCAG00000008360	SMG7	88	85.129	ENSMGAG00000001561	SMG7	90	85.129	Meleagris_gallopavo
ENSPCAG00000008360	SMG7	95	83.971	ENSMAUG00000019484	Smg7	95	84.779	Mesocricetus_auratus
ENSPCAG00000008360	SMG7	94	85.609	ENSMICG00000007145	SMG7	94	85.609	Microcebus_murinus
ENSPCAG00000008360	SMG7	88	91.367	ENSMOCG00000020748	Smg7	89	91.367	Microtus_ochrogaster
ENSPCAG00000008360	SMG7	86	71.053	ENSMMOG00000001524	smg7	82	71.053	Mola_mola
ENSPCAG00000008360	SMG7	90	75.046	ENSMODG00000007139	SMG7	98	75.046	Monodelphis_domestica
ENSPCAG00000008360	SMG7	86	72.867	ENSMALG00000000061	smg7	79	72.867	Monopterus_albus
ENSPCAG00000008360	SMG7	95	83.515	MGP_CAROLIEiJ_G0014704	Smg7	95	83.948	Mus_caroli
ENSPCAG00000008360	SMG7	95	83.333	ENSMUSG00000042772	Smg7	95	84.133	Mus_musculus
ENSPCAG00000008360	SMG7	95	83.424	MGP_PahariEiJ_G0027940	Smg7	95	84.225	Mus_pahari
ENSPCAG00000008360	SMG7	95	83.333	MGP_SPRETEiJ_G0015511	Smg7	95	84.133	Mus_spretus
ENSPCAG00000008360	SMG7	88	92.446	ENSMPUG00000011732	SMG7	88	92.806	Mustela_putorius_furo
ENSPCAG00000008360	SMG7	94	84.779	ENSMLUG00000015417	SMG7	95	84.779	Myotis_lucifugus
ENSPCAG00000008360	SMG7	94	84.225	ENSNGAG00000009836	Smg7	95	84.041	Nannospalax_galili
ENSPCAG00000008360	SMG7	86	67.763	ENSNBRG00000024343	smg7	82	67.763	Neolamprologus_brichardi
ENSPCAG00000008360	SMG7	94	85.886	ENSNLEG00000018018	SMG7	97	82.056	Nomascus_leucogenys
ENSPCAG00000008360	SMG7	63	100.000	ENSMEUG00000004681	SMG7	63	100.000	Notamacropus_eugenii
ENSPCAG00000008360	SMG7	100	70.948	ENSOPRG00000013942	SMG7	99	71.144	Ochotona_princeps
ENSPCAG00000008360	SMG7	94	84.502	ENSODEG00000010390	SMG7	95	84.502	Octodon_degus
ENSPCAG00000008360	SMG7	86	72.648	ENSONIG00000000277	smg7	83	72.648	Oreochromis_niloticus
ENSPCAG00000008360	SMG7	94	80.441	ENSOANG00000000994	SMG7	96	80.257	Ornithorhynchus_anatinus
ENSPCAG00000008360	SMG7	88	85.776	ENSOCUG00000005887	SMG7	83	85.776	Oryctolagus_cuniculus
ENSPCAG00000008360	SMG7	86	70.460	ENSORLG00000007314	smg7	84	70.460	Oryzias_latipes
ENSPCAG00000008360	SMG7	86	70.460	ENSORLG00020015779	smg7	84	70.460	Oryzias_latipes_hni
ENSPCAG00000008360	SMG7	88	70.241	ENSORLG00015012289	smg7	85	70.241	Oryzias_latipes_hsok
ENSPCAG00000008360	SMG7	86	70.678	ENSOMEG00000002328	smg7	84	70.678	Oryzias_melastigma
ENSPCAG00000008360	SMG7	100	83.665	ENSOGAG00000003107	SMG7	98	83.838	Otolemur_garnettii
ENSPCAG00000008360	SMG7	94	84.410	ENSOARG00000001352	SMG7	93	84.410	Ovis_aries
ENSPCAG00000008360	SMG7	92	81.966	ENSPPAG00000031619	SMG7	97	81.966	Pan_paniscus
ENSPCAG00000008360	SMG7	100	83.131	ENSPPRG00000011222	SMG7	97	83.304	Panthera_pardus
ENSPCAG00000008360	SMG7	100	83.131	ENSPTIG00000007242	SMG7	97	83.304	Panthera_tigris_altaica
ENSPCAG00000008360	SMG7	100	84.197	ENSPTRG00000001764	SMG7	98	84.197	Pan_troglodytes
ENSPCAG00000008360	SMG7	100	84.111	ENSPANG00000004520	SMG7	98	84.111	Papio_anubis
ENSPCAG00000008360	SMG7	86	72.088	ENSPKIG00000007242	smg7	84	72.088	Paramormyrops_kingsleyae
ENSPCAG00000008360	SMG7	88	87.433	ENSPSIG00000012201	SMG7	91	85.129	Pelodiscus_sinensis
ENSPCAG00000008360	SMG7	94	84.133	ENSPEMG00000011315	Smg7	95	84.133	Peromyscus_maniculatus_bairdii
ENSPCAG00000008360	SMG7	94	79.576	ENSPCIG00000003786	SMG7	95	89.441	Phascolarctos_cinereus
ENSPCAG00000008360	SMG7	86	69.651	ENSPFOG00000019219	smg7	95	54.836	Poecilia_formosa
ENSPCAG00000008360	SMG7	86	69.651	ENSPLAG00000001446	smg7	83	69.651	Poecilia_latipinna
ENSPCAG00000008360	SMG7	86	69.651	ENSPMEG00000005218	smg7	86	69.651	Poecilia_mexicana
ENSPCAG00000008360	SMG7	85	52.408	ENSPREG00000019039	smg7	92	51.318	Poecilia_reticulata
ENSPCAG00000008360	SMG7	94	77.965	ENSPPYG00000000427	SMG7	95	77.965	Pongo_abelii
ENSPCAG00000008360	SMG7	100	84.111	ENSPCOG00000011996	SMG7	98	84.111	Propithecus_coquereli
ENSPCAG00000008360	SMG7	100	74.545	ENSPVAG00000000851	SMG7	98	74.545	Pteropus_vampyrus
ENSPCAG00000008360	SMG7	86	72.648	ENSPNYG00000007643	smg7	84	72.648	Pundamilia_nyererei
ENSPCAG00000008360	SMG7	88	75.219	ENSPNAG00000011374	smg7	89	75.219	Pygocentrus_nattereri
ENSPCAG00000008360	SMG7	95	83.712	ENSRNOG00000027962	Smg7	100	80.845	Rattus_norvegicus
ENSPCAG00000008360	SMG7	94	85.701	ENSRBIG00000036316	SMG7	97	81.876	Rhinopithecus_bieti
ENSPCAG00000008360	SMG7	94	85.701	ENSRROG00000035719	SMG7	95	85.701	Rhinopithecus_roxellana
ENSPCAG00000008360	SMG7	95	84.608	ENSSBOG00000023454	SMG7	95	85.424	Saimiri_boliviensis_boliviensis
ENSPCAG00000008360	SMG7	94	75.332	ENSSHAG00000013147	SMG7	95	75.265	Sarcophilus_harrisii
ENSPCAG00000008360	SMG7	86	74.286	ENSSFOG00015017252	smg7	84	74.286	Scleropages_formosus
ENSPCAG00000008360	SMG7	86	72.271	ENSSMAG00000006067	smg7	87	71.493	Scophthalmus_maximus
ENSPCAG00000008360	SMG7	82	74.336	ENSSDUG00000017543	smg7	86	72.867	Seriola_dumerili
ENSPCAG00000008360	SMG7	88	82.974	ENSSPUG00000002064	SMG7	89	82.974	Sphenodon_punctatus
ENSPCAG00000008360	SMG7	87	72.747	ENSSPAG00000008733	smg7	83	72.747	Stegastes_partitus
ENSPCAG00000008360	SMG7	94	85.240	ENSSSCG00000015558	SMG7	95	85.240	Sus_scrofa
ENSPCAG00000008360	SMG7	94	71.768	ENSTGUG00000003928	SMG7	96	71.768	Taeniopygia_guttata
ENSPCAG00000008360	SMG7	88	68.951	ENSTNIG00000002802	smg7	89	69.165	Tetraodon_nigroviridis
ENSPCAG00000008360	SMG7	75	94.388	ENSTBEG00000003220	SMG7	74	94.388	Tupaia_belangeri
ENSPCAG00000008360	SMG7	100	83.362	ENSTTRG00000014778	SMG7	99	83.534	Tursiops_truncatus
ENSPCAG00000008360	SMG7	87	88.036	ENSUAMG00000017473	SMG7	90	88.036	Ursus_americanus
ENSPCAG00000008360	SMG7	92	84.948	ENSUMAG00000016389	SMG7	97	85.136	Ursus_maritimus
ENSPCAG00000008360	SMG7	91	89.655	ENSVVUG00000008976	SMG7	89	93.125	Vulpes_vulpes
ENSPCAG00000008360	SMG7	86	74.286	ENSXETG00000012528	smg7	83	74.286	Xenopus_tropicalis
ENSPCAG00000008360	SMG7	86	69.869	ENSXMAG00000007123	smg7	89	69.869	Xiphophorus_maculatus