EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000008368 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 12196 bases
Position: chrscaffold_30929:6366-18561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000007786	RRM_1	PF00076.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008326	-	429	-	ENSPCAP00000007786	143 (aa)	-	UPI00018ADAAE

Gene Model

Click here to download ENSPCAG00000008368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000008368	-	54	33.333	ENSPCAG00000003219	NCBP2	50	33.333
ENSPCAG00000008368	-	66	35.714	ENSPCAG00000005308	-	86	35.714
ENSPCAG00000008368	-	52	34.722	ENSPCAG00000015577	PABPC5	53	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008368	-	69	61.616	ENSG00000076053	RBM7	69	65.882	Homo_sapiens
ENSPCAG00000008368	-	100	88.889	ENSG00000185272	RBM11	51	88.889	Homo_sapiens
ENSPCAG00000008368	-	100	92.308	ENSAMEG00000014371	RBM11	58	92.308	Ailuropoda_melanoleuca
ENSPCAG00000008368	-	57	62.195	ENSACIG00000021769	-	88	62.195	Amphilophus_citrinellus
ENSPCAG00000008368	-	57	62.195	ENSATEG00000000596	-	87	62.195	Anabas_testudineus
ENSPCAG00000008368	-	86	67.742	ENSACAG00000000550	RBM11	53	67.717	Anolis_carolinensis
ENSPCAG00000008368	-	69	61.616	ENSANAG00000031879	-	63	61.616	Aotus_nancymaae
ENSPCAG00000008368	-	97	91.367	ENSANAG00000034350	RBM11	58	91.367	Aotus_nancymaae
ENSPCAG00000008368	-	69	60.606	ENSANAG00000031340	-	63	60.606	Aotus_nancymaae
ENSPCAG00000008368	-	75	50.000	ENSAMXG00000032439	rbm11	51	50.000	Astyanax_mexicanus
ENSPCAG00000008368	-	97	90.647	ENSCJAG00000003218	RBM11	58	90.647	Callithrix_jacchus
ENSPCAG00000008368	-	69	62.626	ENSCJAG00000011949	-	65	62.626	Callithrix_jacchus
ENSPCAG00000008368	-	100	88.811	ENSCAFG00000030228	RBM11	60	88.811	Canis_familiaris
ENSPCAG00000008368	-	67	63.542	ENSCAFG00020002518	-	63	63.542	Canis_lupus_dingo
ENSPCAG00000008368	-	100	88.811	ENSCAFG00020026541	RBM11	60	88.811	Canis_lupus_dingo
ENSPCAG00000008368	-	100	86.014	ENSCHIG00000019134	RBM11	58	86.014	Capra_hircus
ENSPCAG00000008368	-	100	90.909	ENSTSYG00000003871	RBM11	60	90.909	Carlito_syrichta
ENSPCAG00000008368	-	78	86.486	ENSCAPG00000013590	RBM11	61	86.486	Cavia_aperea
ENSPCAG00000008368	-	100	76.224	ENSCPOG00000005309	RBM11	57	76.224	Cavia_porcellus
ENSPCAG00000008368	-	100	89.510	ENSCCAG00000030608	RBM11	60	89.510	Cebus_capucinus
ENSPCAG00000008368	-	100	88.811	ENSCLAG00000005374	RBM11	60	88.811	Chinchilla_lanigera
ENSPCAG00000008368	-	64	65.217	ENSCHOG00000012747	-	62	65.217	Choloepus_hoffmanni
ENSPCAG00000008368	-	100	87.413	ENSCHOG00000007826	RBM11	67	87.413	Choloepus_hoffmanni
ENSPCAG00000008368	-	75	57.944	ENSCPBG00000009366	-	54	61.616	Chrysemys_picta_bellii
ENSPCAG00000008368	-	92	73.684	ENSCPBG00000028340	RBM11	53	73.684	Chrysemys_picta_bellii
ENSPCAG00000008368	-	71	88.235	ENSCANG00000027287	-	50	88.235	Colobus_angolensis_palliatus
ENSPCAG00000008368	-	100	87.413	ENSCGRG00001013426	Rbm11	60	87.413	Cricetulus_griseus_chok1gshd
ENSPCAG00000008368	-	80	43.220	ENSDARG00000090202	rbm11	74	43.220	Danio_rerio
ENSPCAG00000008368	-	100	89.510	ENSDNOG00000044590	RBM11	60	89.510	Dasypus_novemcinctus
ENSPCAG00000008368	-	100	87.413	ENSDORG00000000801	Rbm11	100	87.413	Dipodomys_ordii
ENSPCAG00000008368	-	76	59.259	ENSETEG00000015869	-	52	50.000	Echinops_telfairi
ENSPCAG00000008368	-	69	63.265	ENSEBUG00000009746	rbm7	64	63.265	Eptatretus_burgeri
ENSPCAG00000008368	-	100	88.811	ENSEASG00005013619	RBM11	60	88.811	Equus_asinus_asinus
ENSPCAG00000008368	-	100	91.608	ENSFCAG00000018199	RBM11	60	91.608	Felis_catus
ENSPCAG00000008368	-	78	88.288	ENSFDAG00000012193	RBM11	54	88.288	Fukomys_damarensis
ENSPCAG00000008368	-	57	59.756	ENSFHEG00000000845	-	91	59.756	Fundulus_heteroclitus
ENSPCAG00000008368	-	96	71.223	ENSGALG00000044391	RBM11	54	71.223	Gallus_gallus
ENSPCAG00000008368	-	92	73.684	ENSGAGG00000010715	RBM11	52	73.684	Gopherus_agassizii
ENSPCAG00000008368	-	69	61.616	ENSGGOG00000009941	-	63	65.882	Gorilla_gorilla
ENSPCAG00000008368	-	100	89.583	ENSGGOG00000025603	RBM11	51	89.583	Gorilla_gorilla
ENSPCAG00000008368	-	67	58.333	ENSHGLG00000014428	-	68	61.250	Heterocephalus_glaber_female
ENSPCAG00000008368	-	56	60.000	ENSHGLG00000013918	-	64	60.000	Heterocephalus_glaber_female
ENSPCAG00000008368	-	56	65.000	ENSHGLG00000003564	-	70	65.000	Heterocephalus_glaber_female
ENSPCAG00000008368	-	100	89.510	ENSHGLG00000013951	RBM11	60	89.510	Heterocephalus_glaber_female
ENSPCAG00000008368	-	67	58.333	ENSHGLG00100011703	-	68	61.250	Heterocephalus_glaber_male
ENSPCAG00000008368	-	57	53.659	ENSHGLG00100008973	-	68	53.659	Heterocephalus_glaber_male
ENSPCAG00000008368	-	100	89.510	ENSHGLG00100007848	RBM11	60	89.510	Heterocephalus_glaber_male
ENSPCAG00000008368	-	56	60.000	ENSHGLG00100015249	-	64	60.000	Heterocephalus_glaber_male
ENSPCAG00000008368	-	56	65.000	ENSHGLG00100001021	-	70	65.000	Heterocephalus_glaber_male
ENSPCAG00000008368	-	87	50.806	ENSHGLG00100005739	-	50	50.806	Heterocephalus_glaber_male
ENSPCAG00000008368	-	57	60.976	ENSHCOG00000010866	-	86	60.976	Hippocampus_comes
ENSPCAG00000008368	-	57	63.415	ENSIPUG00000018209	rbm11	87	63.415	Ictalurus_punctatus
ENSPCAG00000008368	-	100	88.811	ENSSTOG00000034273	RBM11	60	88.811	Ictidomys_tridecemlineatus
ENSPCAG00000008368	-	100	88.811	ENSJJAG00000019251	Rbm11	58	90.647	Jaculus_jaculus
ENSPCAG00000008368	-	51	60.274	ENSKMAG00000001899	-	78	60.274	Kryptolebias_marmoratus
ENSPCAG00000008368	-	100	60.140	ENSLACG00000008381	-	61	60.140	Latimeria_chalumnae
ENSPCAG00000008368	-	100	95.804	ENSLAFG00000007082	RBM11	60	95.804	Loxodonta_africana
ENSPCAG00000008368	-	67	62.500	ENSMAUG00000017938	-	62	62.500	Mesocricetus_auratus
ENSPCAG00000008368	-	100	87.413	ENSMAUG00000008588	Rbm11	60	87.413	Mesocricetus_auratus
ENSPCAG00000008368	-	100	90.909	ENSMICG00000037489	RBM11	60	90.909	Microcebus_murinus
ENSPCAG00000008368	-	100	89.510	ENSMOCG00000004302	Rbm11	60	89.510	Microtus_ochrogaster
ENSPCAG00000008368	-	100	85.315	MGP_CAROLIEiJ_G0020874	Rbm11	60	85.315	Mus_caroli
ENSPCAG00000008368	-	69	61.616	ENSMUSG00000042396	Rbm7	63	61.616	Mus_musculus
ENSPCAG00000008368	-	100	86.014	ENSMUSG00000032940	Rbm11	60	86.014	Mus_musculus
ENSPCAG00000008368	-	97	85.612	MGP_PahariEiJ_G0016578	Rbm11	58	85.612	Mus_pahari
ENSPCAG00000008368	-	100	85.315	MGP_SPRETEiJ_G0021780	Rbm11	60	85.315	Mus_spretus
ENSPCAG00000008368	-	100	91.608	ENSMPUG00000010691	RBM11	62	91.608	Mustela_putorius_furo
ENSPCAG00000008368	-	100	88.811	ENSMLUG00000005721	RBM11	58	88.811	Myotis_lucifugus
ENSPCAG00000008368	-	97	90.647	ENSNGAG00000011146	Rbm11	61	88.811	Nannospalax_galili
ENSPCAG00000008368	-	100	87.500	ENSNLEG00000001741	RBM11	51	87.500	Nomascus_leucogenys
ENSPCAG00000008368	-	65	64.516	ENSODEG00000010164	-	63	64.516	Octodon_degus
ENSPCAG00000008368	-	80	72.807	ENSOANG00000008231	-	51	72.807	Ornithorhynchus_anatinus
ENSPCAG00000008368	-	100	89.510	ENSOCUG00000010409	RBM11	60	89.510	Oryctolagus_cuniculus
ENSPCAG00000008368	-	96	47.143	ENSORLG00000028880	rbm7	50	47.143	Oryzias_latipes
ENSPCAG00000008368	-	97	43.151	ENSORLG00015000536	rbm7	50	47.482	Oryzias_latipes_hsok
ENSPCAG00000008368	-	100	87.413	ENSOGAG00000005760	RBM11	72	87.413	Otolemur_garnettii
ENSPCAG00000008368	-	100	86.713	ENSOARG00000016446	RBM11	58	86.713	Ovis_aries
ENSPCAG00000008368	-	100	89.583	ENSPPAG00000037461	RBM11	51	89.583	Pan_paniscus
ENSPCAG00000008368	-	100	91.608	ENSPPRG00000002935	RBM11	60	91.608	Panthera_pardus
ENSPCAG00000008368	-	100	93.007	ENSPTIG00000016278	RBM11	60	93.007	Panthera_tigris_altaica
ENSPCAG00000008368	-	100	89.583	ENSPTRG00000013786	RBM11	51	89.583	Pan_troglodytes
ENSPCAG00000008368	-	74	51.402	ENSPMGG00000001523	rbm7	90	56.250	Periophthalmus_magnuspinnatus
ENSPCAG00000008368	-	97	89.928	ENSPEMG00000016731	Rbm11	59	89.928	Peromyscus_maniculatus_bairdii
ENSPCAG00000008368	-	58	61.446	ENSPMAG00000001518	-	93	61.446	Petromyzon_marinus
ENSPCAG00000008368	-	96	71.014	ENSPCIG00000013003	-	58	71.014	Phascolarctos_cinereus
ENSPCAG00000008368	-	100	88.194	ENSPPYG00000011285	RBM11	51	88.194	Pongo_abelii
ENSPCAG00000008368	-	100	91.608	ENSPCOG00000024136	RBM11	60	91.608	Propithecus_coquereli
ENSPCAG00000008368	-	78	89.189	ENSPVAG00000013858	RBM11	53	89.189	Pteropus_vampyrus
ENSPCAG00000008368	-	57	63.415	ENSPNAG00000009243	rbm11	90	63.415	Pygocentrus_nattereri
ENSPCAG00000008368	-	84	53.846	ENSPNAG00000012813	rbm7	50	53.846	Pygocentrus_nattereri
ENSPCAG00000008368	-	100	86.014	ENSRNOG00000029147	Rbm11	60	86.014	Rattus_norvegicus
ENSPCAG00000008368	-	100	88.811	ENSSBOG00000029034	RBM11	60	88.811	Saimiri_boliviensis_boliviensis
ENSPCAG00000008368	-	70	62.000	ENSSFOG00015013138	rbm11	78	62.000	Scleropages_formosus
ENSPCAG00000008368	-	100	86.014	ENSSARG00000001717	RBM11	60	86.014	Sorex_araneus
ENSPCAG00000008368	-	92	67.669	ENSSPUG00000011684	RBM11	52	67.669	Sphenodon_punctatus
ENSPCAG00000008368	-	62	60.227	ENSSPAG00000019320	rbm7	69	60.227	Stegastes_partitus
ENSPCAG00000008368	-	100	88.811	ENSSSCG00000037517	RBM11	60	88.811	Sus_scrofa
ENSPCAG00000008368	-	78	88.288	ENSTBEG00000004121	RBM11	54	88.288	Tupaia_belangeri
ENSPCAG00000008368	-	100	90.909	ENSTTRG00000007410	RBM11	60	90.909	Tursiops_truncatus
ENSPCAG00000008368	-	100	91.608	ENSUAMG00000027022	RBM11	60	91.608	Ursus_americanus
ENSPCAG00000008368	-	78	94.643	ENSVPAG00000000673	RBM11	54	94.643	Vicugna_pacos
ENSPCAG00000008368	-	56	58.750	ENSXCOG00000001191	-	88	58.750	Xiphophorus_couchianus