EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000008536 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 31480 bases
Position: chrGeneScaffold_3324:34525-66004
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008123	ResIII	PF04851.15	2.2e-12	1	1
ENSPCAP00000008123	DEAD	PF00270.29	5.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008689	SNRNP200-201	6366	-	ENSPCAP00000008123	2121 (aa)	-	UPI00018AEA65

Gene Model

Click here to download ENSPCAG00000008536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000008536	SNRNP200	63	45.347	ENSPCAG00000008834	ASCC3	62	45.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008536	SNRNP200	89	98.718	ENSG00000144028	SNRNP200	99	99.489	Homo_sapiens
ENSPCAG00000008536	SNRNP200	85	97.872	ENSAPOG00000010223	snrnp200	97	94.872	Acanthochromis_polyacanthus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSAMEG00000008996	SNRNP200	97	98.718	Ailuropoda_melanoleuca
ENSPCAG00000008536	SNRNP200	83	94.872	ENSACIG00000001764	snrnp200	96	94.872	Amphilophus_citrinellus
ENSPCAG00000008536	SNRNP200	85	97.872	ENSAOCG00000024593	snrnp200	98	94.872	Amphiprion_ocellaris
ENSPCAG00000008536	SNRNP200	83	94.872	ENSAPEG00000012554	snrnp200	98	94.872	Amphiprion_percula
ENSPCAG00000008536	SNRNP200	85	97.872	ENSATEG00000022522	snrnp200	97	95.513	Anabas_testudineus
ENSPCAG00000008536	SNRNP200	86	97.489	ENSAPLG00000004313	SNRNP200	95	97.489	Anas_platyrhynchos
ENSPCAG00000008536	SNRNP200	85	97.945	ENSACAG00000000434	SNRNP200	94	97.945	Anolis_carolinensis
ENSPCAG00000008536	SNRNP200	89	98.718	ENSANAG00000036625	SNRNP200	97	98.718	Aotus_nancymaae
ENSPCAG00000008536	SNRNP200	85	97.872	ENSACLG00000011188	snrnp200	97	94.872	Astatotilapia_calliptera
ENSPCAG00000008536	SNRNP200	85	95.833	ENSAMXG00000005684	snrnp200	97	94.231	Astyanax_mexicanus
ENSPCAG00000008536	SNRNP200	86	99.087	ENSBTAG00000000848	SNRNP200	95	99.087	Bos_taurus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCJAG00000007514	SNRNP200	97	98.718	Callithrix_jacchus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCAFG00020019979	SNRNP200	97	98.718	Canis_lupus_dingo
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCHIG00000020611	SNRNP200	97	98.718	Capra_hircus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSTSYG00000010467	SNRNP200	97	98.718	Carlito_syrichta
ENSPCAG00000008536	SNRNP200	89	97.436	ENSCAPG00000017234	SNRNP200	98	97.436	Cavia_aperea
ENSPCAG00000008536	SNRNP200	89	97.436	ENSCPOG00000006776	SNRNP200	97	97.436	Cavia_porcellus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCCAG00000033962	SNRNP200	97	98.718	Cebus_capucinus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCATG00000015790	SNRNP200	97	98.718	Cercocebus_atys
ENSPCAG00000008536	SNRNP200	89	97.436	ENSCLAG00000004116	SNRNP200	97	97.436	Chinchilla_lanigera
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCSAG00000017369	SNRNP200	97	98.718	Chlorocebus_sabaeus
ENSPCAG00000008536	SNRNP200	66	100.000	ENSCHOG00000012981	-	55	100.000	Choloepus_hoffmanni
ENSPCAG00000008536	SNRNP200	86	98.402	ENSCPBG00000022571	SNRNP200	93	100.000	Chrysemys_picta_bellii
ENSPCAG00000008536	SNRNP200	86	83.333	ENSCING00000005082	-	94	83.333	Ciona_intestinalis
ENSPCAG00000008536	SNRNP200	86	100.000	ENSCANG00000033932	SNRNP200	98	99.683	Colobus_angolensis_palliatus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSCGRG00001022610	Snrnp200	97	98.718	Cricetulus_griseus_chok1gshd
ENSPCAG00000008536	SNRNP200	86	99.315	ENSCGRG00000016472	Snrnp200	95	99.315	Cricetulus_griseus_crigri
ENSPCAG00000008536	SNRNP200	86	95.745	ENSCSEG00000016399	snrnp200	97	92.949	Cynoglossus_semilaevis
ENSPCAG00000008536	SNRNP200	86	97.872	ENSCVAG00000017631	snrnp200	96	95.513	Cyprinodon_variegatus
ENSPCAG00000008536	SNRNP200	83	94.231	ENSDARG00000077536	snrnp200	95	94.231	Danio_rerio
ENSPCAG00000008536	SNRNP200	86	99.087	ENSDNOG00000011227	SNRNP200	95	99.087	Dasypus_novemcinctus
ENSPCAG00000008536	SNRNP200	83	100.000	ENSDORG00000005861	Snrnp200	93	100.000	Dipodomys_ordii
ENSPCAG00000008536	SNRNP200	89	83.974	FBgn0263599	l(3)72Ab	97	83.974	Drosophila_melanogaster
ENSPCAG00000008536	SNRNP200	79	100.000	ENSETEG00000000162	SNRNP200	71	98.762	Echinops_telfairi
ENSPCAG00000008536	SNRNP200	72	89.103	ENSEBUG00000016524	snrnp200	91	89.103	Eptatretus_burgeri
ENSPCAG00000008536	SNRNP200	83	100.000	ENSEASG00005001884	SNRNP200	92	100.000	Equus_asinus_asinus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSECAG00000019675	SNRNP200	97	98.718	Equus_caballus
ENSPCAG00000008536	SNRNP200	79	99.138	ENSEEUG00000012178	SNRNP200	89	99.138	Erinaceus_europaeus
ENSPCAG00000008536	SNRNP200	85	94.872	ENSELUG00000018948	snrnp200	97	94.872	Esox_lucius
ENSPCAG00000008536	SNRNP200	89	98.718	ENSFCAG00000010699	SNRNP200	97	98.718	Felis_catus
ENSPCAG00000008536	SNRNP200	78	100.000	ENSFALG00000001368	-	88	100.000	Ficedula_albicollis
ENSPCAG00000008536	SNRNP200	89	97.436	ENSFDAG00000004683	SNRNP200	97	97.436	Fukomys_damarensis
ENSPCAG00000008536	SNRNP200	86	97.872	ENSFHEG00000003786	snrnp200	96	94.872	Fundulus_heteroclitus
ENSPCAG00000008536	SNRNP200	86	95.513	ENSGMOG00000004881	snrnp200	97	95.513	Gadus_morhua
ENSPCAG00000008536	SNRNP200	86	97.872	ENSGAFG00000010807	snrnp200	96	94.872	Gambusia_affinis
ENSPCAG00000008536	SNRNP200	86	94.872	ENSGACG00000011474	snrnp200	94	94.872	Gasterosteus_aculeatus
ENSPCAG00000008536	SNRNP200	83	100.000	ENSGAGG00000016069	SNRNP200	95	100.000	Gopherus_agassizii
ENSPCAG00000008536	SNRNP200	89	98.718	ENSGGOG00000005174	SNRNP200	97	98.718	Gorilla_gorilla
ENSPCAG00000008536	SNRNP200	83	94.872	ENSHBUG00000011322	snrnp200	97	94.872	Haplochromis_burtoni
ENSPCAG00000008536	SNRNP200	89	97.436	ENSHGLG00000006654	SNRNP200	97	97.436	Heterocephalus_glaber_female
ENSPCAG00000008536	SNRNP200	89	97.436	ENSHGLG00100018594	SNRNP200	97	97.436	Heterocephalus_glaber_male
ENSPCAG00000008536	SNRNP200	89	98.718	ENSSTOG00000016351	SNRNP200	97	98.718	Ictidomys_tridecemlineatus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSJJAG00000023659	Snrnp200	97	98.718	Jaculus_jaculus
ENSPCAG00000008536	SNRNP200	86	97.872	ENSKMAG00000003665	snrnp200	96	94.231	Kryptolebias_marmoratus
ENSPCAG00000008536	SNRNP200	86	95.745	ENSLBEG00000021585	snrnp200	97	94.872	Labrus_bergylta
ENSPCAG00000008536	SNRNP200	71	97.436	ENSLACG00000000226	SNRNP200	97	97.436	Latimeria_chalumnae
ENSPCAG00000008536	SNRNP200	83	97.436	ENSLOCG00000015198	snrnp200	95	97.436	Lepisosteus_oculatus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSLAFG00000015626	SNRNP200	97	98.718	Loxodonta_africana
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMFAG00000040174	SNRNP200	97	98.718	Macaca_fascicularis
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMMUG00000023261	SNRNP200	97	98.718	Macaca_mulatta
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMNEG00000032398	SNRNP200	97	98.718	Macaca_nemestrina
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMLEG00000019083	SNRNP200	97	98.718	Mandrillus_leucophaeus
ENSPCAG00000008536	SNRNP200	86	97.872	ENSMAMG00000007851	snrnp200	96	94.872	Mastacembelus_armatus
ENSPCAG00000008536	SNRNP200	83	94.872	ENSMZEG00005010787	snrnp200	97	94.872	Maylandia_zebra
ENSPCAG00000008536	SNRNP200	83	98.730	ENSMGAG00000001831	SNRNP200	93	98.730	Meleagris_gallopavo
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMAUG00000011825	Snrnp200	97	98.718	Mesocricetus_auratus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMICG00000004710	SNRNP200	97	98.718	Microcebus_murinus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMOCG00000011814	Snrnp200	97	98.718	Microtus_ochrogaster
ENSPCAG00000008536	SNRNP200	83	97.872	ENSMMOG00000014167	snrnp200	95	92.949	Mola_mola
ENSPCAG00000008536	SNRNP200	89	97.436	ENSMODG00000008475	SNRNP200	97	97.436	Monodelphis_domestica
ENSPCAG00000008536	SNRNP200	85	97.872	ENSMALG00000001973	snrnp200	97	94.872	Monopterus_albus
ENSPCAG00000008536	SNRNP200	89	98.718	MGP_CAROLIEiJ_G0024250	Snrnp200	97	98.718	Mus_caroli
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMUSG00000003660	Snrnp200	97	98.718	Mus_musculus
ENSPCAG00000008536	SNRNP200	89	98.718	MGP_PahariEiJ_G0025695	Snrnp200	97	98.718	Mus_pahari
ENSPCAG00000008536	SNRNP200	89	98.718	MGP_SPRETEiJ_G0025170	Snrnp200	97	98.718	Mus_spretus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSMPUG00000008949	SNRNP200	97	98.718	Mustela_putorius_furo
ENSPCAG00000008536	SNRNP200	83	100.000	ENSMLUG00000010493	SNRNP200	92	100.000	Myotis_lucifugus
ENSPCAG00000008536	SNRNP200	89	96.154	ENSMLUG00000027511	-	97	96.154	Myotis_lucifugus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSNGAG00000021993	Snrnp200	97	98.718	Nannospalax_galili
ENSPCAG00000008536	SNRNP200	80	94.872	ENSNBRG00000017960	snrnp200	96	94.872	Neolamprologus_brichardi
ENSPCAG00000008536	SNRNP200	86	97.878	ENSNLEG00000000025	SNRNP200	94	97.878	Nomascus_leucogenys
ENSPCAG00000008536	SNRNP200	86	100.000	ENSMEUG00000010532	SNRNP200	73	100.000	Notamacropus_eugenii
ENSPCAG00000008536	SNRNP200	81	99.683	ENSOPRG00000015464	SNRNP200	90	99.683	Ochotona_princeps
ENSPCAG00000008536	SNRNP200	89	97.436	ENSODEG00000008366	SNRNP200	97	97.436	Octodon_degus
ENSPCAG00000008536	SNRNP200	85	97.872	ENSONIG00000010714	snrnp200	97	94.872	Oreochromis_niloticus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSOCUG00000009864	SNRNP200	97	98.718	Oryctolagus_cuniculus
ENSPCAG00000008536	SNRNP200	86	95.745	ENSORLG00000012286	snrnp200	97	93.590	Oryzias_latipes
ENSPCAG00000008536	SNRNP200	86	95.745	ENSORLG00020004648	snrnp200	97	93.590	Oryzias_latipes_hni
ENSPCAG00000008536	SNRNP200	86	95.745	ENSORLG00015019114	snrnp200	98	93.590	Oryzias_latipes_hsok
ENSPCAG00000008536	SNRNP200	85	95.745	ENSOMEG00000011834	snrnp200	97	94.231	Oryzias_melastigma
ENSPCAG00000008536	SNRNP200	89	98.718	ENSOGAG00000006879	SNRNP200	97	98.718	Otolemur_garnettii
ENSPCAG00000008536	SNRNP200	89	98.718	ENSOARG00000013949	SNRNP200	97	98.718	Ovis_aries
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPPAG00000041559	SNRNP200	97	98.718	Pan_paniscus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPPRG00000004435	SNRNP200	97	98.718	Panthera_pardus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPTIG00000006380	SNRNP200	97	98.718	Panthera_tigris_altaica
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPTRG00000012230	SNRNP200	97	98.718	Pan_troglodytes
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPANG00000006017	SNRNP200	97	98.718	Papio_anubis
ENSPCAG00000008536	SNRNP200	86	94.231	ENSPKIG00000014762	snrnp200	95	94.231	Paramormyrops_kingsleyae
ENSPCAG00000008536	SNRNP200	86	96.795	ENSPSIG00000008580	SNRNP200	95	96.795	Pelodiscus_sinensis
ENSPCAG00000008536	SNRNP200	86	99.315	ENSPCIG00000023050	SNRNP200	95	99.315	Phascolarctos_cinereus
ENSPCAG00000008536	SNRNP200	83	97.872	ENSPFOG00000015110	snrnp200	95	95.513	Poecilia_formosa
ENSPCAG00000008536	SNRNP200	83	95.513	ENSPLAG00000006711	snrnp200	96	95.513	Poecilia_latipinna
ENSPCAG00000008536	SNRNP200	83	94.872	ENSPMEG00000021166	snrnp200	96	94.872	Poecilia_mexicana
ENSPCAG00000008536	SNRNP200	86	95.745	ENSPREG00000008875	snrnp200	97	95.513	Poecilia_reticulata
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPPYG00000012068	SNRNP200	97	98.718	Pongo_abelii
ENSPCAG00000008536	SNRNP200	89	98.718	ENSPCOG00000024608	SNRNP200	97	98.718	Propithecus_coquereli
ENSPCAG00000008536	SNRNP200	85	98.551	ENSPVAG00000005860	SNRNP200	91	98.551	Pteropus_vampyrus
ENSPCAG00000008536	SNRNP200	85	97.872	ENSPNYG00000017476	snrnp200	96	94.872	Pundamilia_nyererei
ENSPCAG00000008536	SNRNP200	86	95.833	ENSPNAG00000010998	snrnp200	96	94.231	Pygocentrus_nattereri
ENSPCAG00000008536	SNRNP200	89	98.718	ENSRNOG00000012157	Snrnp200	97	98.718	Rattus_norvegicus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSRBIG00000044690	-	97	98.718	Rhinopithecus_bieti
ENSPCAG00000008536	SNRNP200	89	98.718	ENSRROG00000037952	-	97	98.718	Rhinopithecus_roxellana
ENSPCAG00000008536	SNRNP200	89	98.718	ENSSBOG00000035471	SNRNP200	97	98.718	Saimiri_boliviensis_boliviensis
ENSPCAG00000008536	SNRNP200	83	99.048	ENSSHAG00000000758	SNRNP200	95	99.048	Sarcophilus_harrisii
ENSPCAG00000008536	SNRNP200	85	97.917	ENSSFOG00015018826	snrnp200	95	93.590	Scleropages_formosus
ENSPCAG00000008536	SNRNP200	85	95.745	ENSSMAG00000005463	snrnp200	97	94.872	Scophthalmus_maximus
ENSPCAG00000008536	SNRNP200	85	97.872	ENSSDUG00000021410	snrnp200	97	94.872	Seriola_dumerili
ENSPCAG00000008536	SNRNP200	85	97.872	ENSSLDG00000010884	snrnp200	97	94.872	Seriola_lalandi_dorsalis
ENSPCAG00000008536	SNRNP200	82	98.718	ENSSARG00000010728	SNRNP200	91	98.718	Sorex_araneus
ENSPCAG00000008536	SNRNP200	86	98.402	ENSSPUG00000003726	-	95	98.402	Sphenodon_punctatus
ENSPCAG00000008536	SNRNP200	85	97.872	ENSSPAG00000001842	snrnp200	97	94.872	Stegastes_partitus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSSSCG00000008127	SNRNP200	97	98.718	Sus_scrofa
ENSPCAG00000008536	SNRNP200	84	100.000	ENSTGUG00000014475	-	97	88.095	Taeniopygia_guttata
ENSPCAG00000008536	SNRNP200	85	95.745	ENSTRUG00000001307	snrnp200	97	94.872	Takifugu_rubripes
ENSPCAG00000008536	SNRNP200	84	97.872	ENSTNIG00000004320	snrnp200	91	94.872	Tetraodon_nigroviridis
ENSPCAG00000008536	SNRNP200	67	99.324	ENSTBEG00000003329	-	66	99.324	Tupaia_belangeri
ENSPCAG00000008536	SNRNP200	89	98.077	ENSTTRG00000004983	SNRNP200	97	98.077	Tursiops_truncatus
ENSPCAG00000008536	SNRNP200	55	100.000	ENSUAMG00000008395	-	80	100.000	Ursus_americanus
ENSPCAG00000008536	SNRNP200	89	98.718	ENSUMAG00000012385	SNRNP200	97	98.718	Ursus_maritimus
ENSPCAG00000008536	SNRNP200	73	100.000	ENSVPAG00000006434	SNRNP200	63	100.000	Vicugna_pacos
ENSPCAG00000008536	SNRNP200	89	98.718	ENSVVUG00000026247	SNRNP200	97	98.718	Vulpes_vulpes
ENSPCAG00000008536	SNRNP200	86	97.959	ENSXETG00000001243	snrnp200	95	96.795	Xenopus_tropicalis
ENSPCAG00000008536	SNRNP200	83	95.513	ENSXMAG00000002058	snrnp200	96	95.513	Xiphophorus_maculatus