EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000008634 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 39398 bases
Position: chrGeneScaffold_3658:16614-56011
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008147	ResIII	PF04851.15	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008718	SBNO1-201	4176	-	ENSPCAP00000008147	1391 (aa)	-	UPI00018AE90A

Gene Model

Click here to download ENSPCAG00000008634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008634's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000008634	SBNO1	57	67.692	ENSPCAG00000012256	SBNO2	58	67.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008634	SBNO1	88	92.424	ENSG00000139697	SBNO1	89	92.455	Homo_sapiens
ENSPCAG00000008634	SBNO1	71	78.395	ENSAPOG00000003196	sbno1	85	78.893	Acanthochromis_polyacanthus
ENSPCAG00000008634	SBNO1	89	92.087	ENSAMEG00000015151	SBNO1	89	92.087	Ailuropoda_melanoleuca
ENSPCAG00000008634	SBNO1	88	67.989	ENSACIG00000008088	sbno1	88	68.349	Amphilophus_citrinellus
ENSPCAG00000008634	SBNO1	88	68.901	ENSAOCG00000014859	sbno1	87	69.385	Amphiprion_ocellaris
ENSPCAG00000008634	SBNO1	88	68.901	ENSAPEG00000006069	sbno1	87	69.385	Amphiprion_percula
ENSPCAG00000008634	SBNO1	88	69.507	ENSATEG00000006667	sbno1	88	69.721	Anabas_testudineus
ENSPCAG00000008634	SBNO1	88	87.879	ENSAPLG00000015674	SBNO1	84	90.541	Anas_platyrhynchos
ENSPCAG00000008634	SBNO1	88	79.082	ENSACAG00000015441	SBNO1	78	79.167	Anolis_carolinensis
ENSPCAG00000008634	SBNO1	88	91.747	ENSANAG00000029958	-	89	91.781	Aotus_nancymaae
ENSPCAG00000008634	SBNO1	88	66.712	ENSACLG00000024913	sbno1	89	67.623	Astatotilapia_calliptera
ENSPCAG00000008634	SBNO1	88	73.453	ENSAMXG00000019473	sbno1	88	73.505	Astyanax_mexicanus
ENSPCAG00000008634	SBNO1	88	93.122	ENSBTAG00000020505	SBNO1	89	93.151	Bos_taurus
ENSPCAG00000008634	SBNO1	88	91.747	ENSCJAG00000016599	SBNO1	93	87.791	Callithrix_jacchus
ENSPCAG00000008634	SBNO1	88	92.572	ENSCAFG00000007503	SBNO1	89	92.603	Canis_familiaris
ENSPCAG00000008634	SBNO1	88	92.572	ENSCAFG00020015363	SBNO1	89	92.603	Canis_lupus_dingo
ENSPCAG00000008634	SBNO1	88	93.113	ENSCHIG00000008382	SBNO1	89	93.141	Capra_hircus
ENSPCAG00000008634	SBNO1	88	92.435	ENSTSYG00000012749	SBNO1	89	92.466	Carlito_syrichta
ENSPCAG00000008634	SBNO1	84	92.331	ENSCAPG00000000384	SBNO1	92	89.908	Cavia_aperea
ENSPCAG00000008634	SBNO1	88	91.322	ENSCPOG00000008109	SBNO1	89	91.358	Cavia_porcellus
ENSPCAG00000008634	SBNO1	84	100.000	ENSCCAG00000035316	SBNO1	89	100.000	Cebus_capucinus
ENSPCAG00000008634	SBNO1	85	92.251	ENSCATG00000008239	SBNO1	91	88.939	Cercocebus_atys
ENSPCAG00000008634	SBNO1	88	91.334	ENSCLAG00000008995	SBNO1	89	91.370	Chinchilla_lanigera
ENSPCAG00000008634	SBNO1	72	92.886	ENSCSAG00000002064	SBNO1	86	92.929	Chlorocebus_sabaeus
ENSPCAG00000008634	SBNO1	79	88.154	ENSCHOG00000008814	SBNO1	79	88.203	Choloepus_hoffmanni
ENSPCAG00000008634	SBNO1	88	86.915	ENSCPBG00000025968	SBNO1	83	90.541	Chrysemys_picta_bellii
ENSPCAG00000008634	SBNO1	84	95.495	ENSCANG00000042688	-	90	95.495	Colobus_angolensis_palliatus
ENSPCAG00000008634	SBNO1	88	91.884	ENSCGRG00001017470	Sbno1	89	91.918	Cricetulus_griseus_chok1gshd
ENSPCAG00000008634	SBNO1	88	91.884	ENSCGRG00000004756	Sbno1	89	91.918	Cricetulus_griseus_crigri
ENSPCAG00000008634	SBNO1	87	68.759	ENSCSEG00000011919	sbno1	88	68.792	Cynoglossus_semilaevis
ENSPCAG00000008634	SBNO1	88	68.692	ENSCVAG00000007038	sbno1	89	69.038	Cyprinodon_variegatus
ENSPCAG00000008634	SBNO1	88	72.977	ENSDARG00000099080	sbno1	88	73.171	Danio_rerio
ENSPCAG00000008634	SBNO1	88	92.011	ENSDNOG00000017147	SBNO1	84	92.329	Dasypus_novemcinctus
ENSPCAG00000008634	SBNO1	83	90.783	ENSDORG00000015261	Sbno1	88	90.783	Dipodomys_ordii
ENSPCAG00000008634	SBNO1	66	100.000	ENSETEG00000005620	SBNO1	66	100.000	Echinops_telfairi
ENSPCAG00000008634	SBNO1	62	63.576	ENSEBUG00000013823	sbno1	76	63.576	Eptatretus_burgeri
ENSPCAG00000008634	SBNO1	51	88.559	ENSEASG00005012595	-	92	89.266	Equus_asinus_asinus
ENSPCAG00000008634	SBNO1	88	93.398	ENSECAG00000006127	SBNO1	89	93.425	Equus_caballus
ENSPCAG00000008634	SBNO1	71	97.802	ENSEEUG00000003793	SBNO1	71	97.802	Erinaceus_europaeus
ENSPCAG00000008634	SBNO1	88	70.430	ENSELUG00000002886	sbno1	88	70.651	Esox_lucius
ENSPCAG00000008634	SBNO1	88	92.985	ENSFCAG00000015331	SBNO1	89	93.014	Felis_catus
ENSPCAG00000008634	SBNO1	88	87.879	ENSFALG00000009273	SBNO1	84	90.991	Ficedula_albicollis
ENSPCAG00000008634	SBNO1	88	91.298	ENSFDAG00000014232	SBNO1	88	91.221	Fukomys_damarensis
ENSPCAG00000008634	SBNO1	87	69.505	ENSFHEG00000007360	sbno1	89	69.118	Fundulus_heteroclitus
ENSPCAG00000008634	SBNO1	82	72.403	ENSGMOG00000018229	sbno1	87	72.853	Gadus_morhua
ENSPCAG00000008634	SBNO1	77	87.603	ENSGALG00000003392	SBNO1	81	93.333	Gallus_gallus
ENSPCAG00000008634	SBNO1	88	68.758	ENSGAFG00000003960	sbno1	89	69.057	Gambusia_affinis
ENSPCAG00000008634	SBNO1	82	73.765	ENSGACG00000015633	sbno1	82	78.704	Gasterosteus_aculeatus
ENSPCAG00000008634	SBNO1	88	84.711	ENSGAGG00000001065	SBNO1	84	90.991	Gopherus_agassizii
ENSPCAG00000008634	SBNO1	88	92.287	ENSGGOG00000015000	SBNO1	89	92.318	Gorilla_gorilla
ENSPCAG00000008634	SBNO1	81	75.714	ENSHBUG00000011910	sbno1	84	75.714	Haplochromis_burtoni
ENSPCAG00000008634	SBNO1	88	91.310	ENSHGLG00000014165	-	89	91.233	Heterocephalus_glaber_female
ENSPCAG00000008634	SBNO1	83	66.714	ENSHCOG00000003246	sbno1	89	66.667	Hippocampus_comes
ENSPCAG00000008634	SBNO1	88	72.039	ENSIPUG00000015830	Sbno1	82	78.733	Ictalurus_punctatus
ENSPCAG00000008634	SBNO1	88	92.700	ENSSTOG00000023221	SBNO1	89	92.730	Ictidomys_tridecemlineatus
ENSPCAG00000008634	SBNO1	88	92.022	ENSJJAG00000001741	Sbno1	89	92.055	Jaculus_jaculus
ENSPCAG00000008634	SBNO1	88	68.659	ENSKMAG00000009696	sbno1	84	77.064	Kryptolebias_marmoratus
ENSPCAG00000008634	SBNO1	88	67.768	ENSLBEG00000007623	sbno1	84	77.828	Labrus_bergylta
ENSPCAG00000008634	SBNO1	88	79.806	ENSLACG00000017227	SBNO1	84	79.781	Latimeria_chalumnae
ENSPCAG00000008634	SBNO1	88	75.479	ENSLOCG00000005725	sbno1	82	82.805	Lepisosteus_oculatus
ENSPCAG00000008634	SBNO1	84	97.748	ENSLAFG00000002135	SBNO1	84	97.748	Loxodonta_africana
ENSPCAG00000008634	SBNO1	88	92.022	ENSMFAG00000031429	SBNO1	89	92.055	Macaca_fascicularis
ENSPCAG00000008634	SBNO1	88	92.149	ENSMMUG00000011496	SBNO1	89	92.181	Macaca_mulatta
ENSPCAG00000008634	SBNO1	88	89.118	ENSMLEG00000033260	SBNO1	89	89.041	Mandrillus_leucophaeus
ENSPCAG00000008634	SBNO1	88	68.980	ENSMAMG00000005473	sbno1	84	77.828	Mastacembelus_armatus
ENSPCAG00000008634	SBNO1	88	87.603	ENSMGAG00000003274	SBNO1	84	91.441	Meleagris_gallopavo
ENSPCAG00000008634	SBNO1	50	87.393	ENSMAUG00000004834	-	100	87.536	Mesocricetus_auratus
ENSPCAG00000008634	SBNO1	88	92.985	ENSMICG00000006573	-	89	93.014	Microcebus_murinus
ENSPCAG00000008634	SBNO1	88	91.736	ENSMOCG00000009390	Sbno1	90	91.770	Microtus_ochrogaster
ENSPCAG00000008634	SBNO1	88	65.010	ENSMMOG00000008691	sbno1	87	65.010	Mola_mola
ENSPCAG00000008634	SBNO1	88	90.096	ENSMODG00000012470	SBNO1	87	90.137	Monodelphis_domestica
ENSPCAG00000008634	SBNO1	88	70.213	ENSMALG00000001056	sbno1	89	70.464	Monopterus_albus
ENSPCAG00000008634	SBNO1	88	91.862	MGP_CAROLIEiJ_G0027749	Sbno1	95	99.561	Mus_caroli
ENSPCAG00000008634	SBNO1	88	92.149	ENSMUSG00000038095	Sbno1	94	99.561	Mus_musculus
ENSPCAG00000008634	SBNO1	88	92.011	MGP_PahariEiJ_G0024329	Sbno1	95	99.561	Mus_pahari
ENSPCAG00000008634	SBNO1	88	92.149	MGP_SPRETEiJ_G0028747	Sbno1	95	99.561	Mus_spretus
ENSPCAG00000008634	SBNO1	88	92.572	ENSMPUG00000001658	SBNO1	89	92.603	Mustela_putorius_furo
ENSPCAG00000008634	SBNO1	88	92.297	ENSMLUG00000017159	SBNO1	89	92.329	Myotis_lucifugus
ENSPCAG00000008634	SBNO1	88	92.435	ENSNGAG00000012620	Sbno1	89	92.466	Nannospalax_galili
ENSPCAG00000008634	SBNO1	88	68.169	ENSNBRG00000019189	sbno1	88	69.074	Neolamprologus_brichardi
ENSPCAG00000008634	SBNO1	88	92.276	ENSNLEG00000001502	SBNO1	88	92.318	Nomascus_leucogenys
ENSPCAG00000008634	SBNO1	54	95.455	ENSMEUG00000008768	-	81	95.455	Notamacropus_eugenii
ENSPCAG00000008634	SBNO1	84	97.297	ENSOPRG00000011054	SBNO1	84	97.297	Ochotona_princeps
ENSPCAG00000008634	SBNO1	88	91.436	ENSODEG00000009997	SBNO1	89	91.358	Octodon_degus
ENSPCAG00000008634	SBNO1	88	68.742	ENSONIG00000015348	sbno1	89	69.485	Oreochromis_niloticus
ENSPCAG00000008634	SBNO1	87	91.989	ENSOCUG00000002441	SBNO1	84	91.770	Oryctolagus_cuniculus
ENSPCAG00000008634	SBNO1	88	68.484	ENSORLG00000001593	sbno1	84	76.018	Oryzias_latipes
ENSPCAG00000008634	SBNO1	88	68.442	ENSORLG00020015216	sbno1	84	76.018	Oryzias_latipes_hni
ENSPCAG00000008634	SBNO1	88	68.575	ENSORLG00015002726	sbno1	84	76.018	Oryzias_latipes_hsok
ENSPCAG00000008634	SBNO1	88	68.260	ENSOMEG00000019313	sbno1	84	75.799	Oryzias_melastigma
ENSPCAG00000008634	SBNO1	50	84.670	ENSOGAG00000010781	-	100	85.387	Otolemur_garnettii
ENSPCAG00000008634	SBNO1	88	92.886	ENSOARG00000004404	SBNO1	89	92.886	Ovis_aries
ENSPCAG00000008634	SBNO1	88	92.297	ENSPPAG00000024635	SBNO1	89	92.329	Pan_paniscus
ENSPCAG00000008634	SBNO1	88	92.985	ENSPPRG00000022092	SBNO1	89	93.014	Panthera_pardus
ENSPCAG00000008634	SBNO1	88	92.022	ENSPTIG00000017803	SBNO1	89	92.466	Panthera_tigris_altaica
ENSPCAG00000008634	SBNO1	88	92.297	ENSPTRG00000005597	SBNO1	89	92.329	Pan_troglodytes
ENSPCAG00000008634	SBNO1	88	92.287	ENSPANG00000011640	SBNO1	89	92.318	Papio_anubis
ENSPCAG00000008634	SBNO1	88	73.619	ENSPKIG00000001441	sbno1	88	73.842	Paramormyrops_kingsleyae
ENSPCAG00000008634	SBNO1	80	82.627	ENSPSIG00000009256	-	83	82.698	Pelodiscus_sinensis
ENSPCAG00000008634	SBNO1	88	85.910	ENSPSIG00000009572	-	84	90.541	Pelodiscus_sinensis
ENSPCAG00000008634	SBNO1	88	91.197	ENSPEMG00000016087	Sbno1	89	91.233	Peromyscus_maniculatus_bairdii
ENSPCAG00000008634	SBNO1	88	89.560	ENSPCIG00000010985	SBNO1	89	89.877	Phascolarctos_cinereus
ENSPCAG00000008634	SBNO1	88	69.159	ENSPFOG00000005069	sbno1	89	69.588	Poecilia_formosa
ENSPCAG00000008634	SBNO1	88	68.892	ENSPLAG00000015015	sbno1	89	69.640	Poecilia_latipinna
ENSPCAG00000008634	SBNO1	88	69.200	ENSPMEG00000021212	sbno1	89	69.629	Poecilia_mexicana
ENSPCAG00000008634	SBNO1	88	68.750	ENSPREG00000017746	sbno1	89	69.180	Poecilia_reticulata
ENSPCAG00000008634	SBNO1	88	91.724	ENSPPYG00000005084	SBNO1	89	91.770	Pongo_abelii
ENSPCAG00000008634	SBNO1	88	92.700	ENSPCOG00000024277	SBNO1	89	92.603	Propithecus_coquereli
ENSPCAG00000008634	SBNO1	87	97.737	ENSPVAG00000015304	SBNO1	87	97.737	Pteropus_vampyrus
ENSPCAG00000008634	SBNO1	88	69.323	ENSPNYG00000004291	sbno1	89	69.669	Pundamilia_nyererei
ENSPCAG00000008634	SBNO1	84	80.090	ENSPNAG00000015622	sbno1	84	80.090	Pygocentrus_nattereri
ENSPCAG00000008634	SBNO1	88	91.609	ENSRNOG00000001064	Sbno1	89	91.644	Rattus_norvegicus
ENSPCAG00000008634	SBNO1	88	92.160	ENSRROG00000034230	SBNO1	89	92.192	Rhinopithecus_roxellana
ENSPCAG00000008634	SBNO1	85	88.626	ENSSBOG00000015422	SBNO1	88	88.676	Saimiri_boliviensis_boliviensis
ENSPCAG00000008634	SBNO1	88	73.793	ENSSFOG00015019025	sbno1	88	73.741	Scleropages_formosus
ENSPCAG00000008634	SBNO1	88	69.241	ENSSMAG00000013640	sbno1	89	69.588	Scophthalmus_maximus
ENSPCAG00000008634	SBNO1	88	68.449	ENSSDUG00000023480	sbno1	88	68.800	Seriola_dumerili
ENSPCAG00000008634	SBNO1	88	68.449	ENSSLDG00000007928	sbno1	88	68.800	Seriola_lalandi_dorsalis
ENSPCAG00000008634	SBNO1	81	96.314	ENSSARG00000002594	SBNO1	81	96.314	Sorex_araneus
ENSPCAG00000008634	SBNO1	88	82.231	ENSSPUG00000012640	SBNO1	88	82.305	Sphenodon_punctatus
ENSPCAG00000008634	SBNO1	88	68.526	ENSSPAG00000016244	sbno1	88	68.874	Stegastes_partitus
ENSPCAG00000008634	SBNO1	88	93.103	ENSSSCG00000009776	SBNO1	89	93.141	Sus_scrofa
ENSPCAG00000008634	SBNO1	88	87.466	ENSTGUG00000005380	SBNO1	84	91.441	Taeniopygia_guttata
ENSPCAG00000008634	SBNO1	84	76.606	ENSTRUG00000018490	sbno1	84	76.606	Takifugu_rubripes
ENSPCAG00000008634	SBNO1	52	67.952	ENSTNIG00000013506	sbno1	93	67.952	Tetraodon_nigroviridis
ENSPCAG00000008634	SBNO1	88	92.710	ENSUAMG00000019671	SBNO1	89	92.740	Ursus_americanus
ENSPCAG00000008634	SBNO1	88	92.710	ENSUMAG00000004002	SBNO1	89	92.740	Ursus_maritimus
ENSPCAG00000008634	SBNO1	84	93.478	ENSVPAG00000007024	SBNO1	84	93.478	Vicugna_pacos
ENSPCAG00000008634	SBNO1	88	92.572	ENSVVUG00000027807	SBNO1	89	92.603	Vulpes_vulpes
ENSPCAG00000008634	SBNO1	88	72.329	ENSXETG00000031930	SBNO1	92	71.274	Xenopus_tropicalis
ENSPCAG00000008634	SBNO1	76	68.464	ENSXCOG00000011607	sbno1	88	67.900	Xiphophorus_couchianus
ENSPCAG00000008634	SBNO1	88	69.149	ENSXMAG00000002140	sbno1	89	69.444	Xiphophorus_maculatus