EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008790 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 18893 bases
Position: chrGeneScaffold_4992:5285-24177
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008183	AD	PF09793.9	8.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000008756	LSM12-201	477	-	ENSPCAP00000008183	159 (aa)	-	UPI00018AF20F

Gene Model

Click here to download ENSPCAG00000008790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008790	LSM12	100	99.371	ENSG00000161654	LSM12	82	99.371	Homo_sapiens
ENSPCAG00000008790	LSM12	100	86.792	ENSAPOG00000007907	lsm12b	81	86.792	Acanthochromis_polyacanthus
ENSPCAG00000008790	LSM12	100	96.914	ENSAMEG00000018321	LSM12	82	96.914	Ailuropoda_melanoleuca
ENSPCAG00000008790	LSM12	100	84.277	ENSACIG00000008538	lsm12b	81	84.277	Amphilophus_citrinellus
ENSPCAG00000008790	LSM12	100	86.164	ENSAOCG00000021847	lsm12b	71	86.164	Amphiprion_ocellaris
ENSPCAG00000008790	LSM12	100	86.164	ENSAPEG00000002252	lsm12b	85	86.164	Amphiprion_percula
ENSPCAG00000008790	LSM12	100	86.164	ENSATEG00000005705	lsm12b	81	86.164	Anabas_testudineus
ENSPCAG00000008790	LSM12	100	96.226	ENSACAG00000004618	LSM12	82	96.226	Anolis_carolinensis
ENSPCAG00000008790	LSM12	100	99.371	ENSANAG00000029011	LSM12	82	99.371	Aotus_nancymaae
ENSPCAG00000008790	LSM12	100	84.906	ENSACLG00000026332	lsm12b	81	84.906	Astatotilapia_calliptera
ENSPCAG00000008790	LSM12	100	78.616	ENSAMXG00000036117	lsm12a	74	78.616	Astyanax_mexicanus
ENSPCAG00000008790	LSM12	100	85.535	ENSAMXG00000032952	lsm12b	81	85.535	Astyanax_mexicanus
ENSPCAG00000008790	LSM12	100	99.371	ENSBTAG00000016252	LSM12	82	99.371	Bos_taurus
ENSPCAG00000008790	LSM12	100	99.371	ENSCJAG00000048480	LSM12	82	99.371	Callithrix_jacchus
ENSPCAG00000008790	LSM12	100	99.371	ENSCAFG00000014379	LSM12	75	99.371	Canis_familiaris
ENSPCAG00000008790	LSM12	100	99.371	ENSCAFG00020012173	LSM12	82	99.371	Canis_lupus_dingo
ENSPCAG00000008790	LSM12	100	99.371	ENSCHIG00000018175	LSM12	82	99.371	Capra_hircus
ENSPCAG00000008790	LSM12	100	99.371	ENSTSYG00000036361	LSM12	82	99.371	Carlito_syrichta
ENSPCAG00000008790	LSM12	83	94.697	ENSCAPG00000009647	LSM12	72	94.697	Cavia_aperea
ENSPCAG00000008790	LSM12	100	98.113	ENSCPOG00000012860	LSM12	82	98.113	Cavia_porcellus
ENSPCAG00000008790	LSM12	100	99.371	ENSCCAG00000032905	LSM12	82	99.371	Cebus_capucinus
ENSPCAG00000008790	LSM12	100	99.371	ENSCATG00000030577	-	82	99.371	Cercocebus_atys
ENSPCAG00000008790	LSM12	100	99.371	ENSCLAG00000015759	LSM12	82	99.371	Chinchilla_lanigera
ENSPCAG00000008790	LSM12	100	99.371	ENSCSAG00000003486	LSM12	82	99.371	Chlorocebus_sabaeus
ENSPCAG00000008790	LSM12	50	100.000	ENSCHOG00000001198	LSM12	73	100.000	Choloepus_hoffmanni
ENSPCAG00000008790	LSM12	100	95.597	ENSCPBG00000027105	LSM12	82	95.597	Chrysemys_picta_bellii
ENSPCAG00000008790	LSM12	100	99.371	ENSCANG00000043328	LSM12	82	99.371	Colobus_angolensis_palliatus
ENSPCAG00000008790	LSM12	100	99.371	ENSCGRG00001002094	Lsm12	82	99.371	Cricetulus_griseus_chok1gshd
ENSPCAG00000008790	LSM12	78	100.000	ENSCGRG00000004316	Lsm12	70	100.000	Cricetulus_griseus_crigri
ENSPCAG00000008790	LSM12	100	85.535	ENSCSEG00000008434	lsm12b	81	85.535	Cynoglossus_semilaevis
ENSPCAG00000008790	LSM12	100	84.906	ENSCVAG00000008755	lsm12b	81	84.906	Cyprinodon_variegatus
ENSPCAG00000008790	LSM12	100	78.616	ENSDARG00000028848	lsm12a	81	78.616	Danio_rerio
ENSPCAG00000008790	LSM12	100	85.535	ENSDARG00000109510	lsm12b	81	85.535	Danio_rerio
ENSPCAG00000008790	LSM12	100	98.742	ENSDNOG00000002418	LSM12	74	98.742	Dasypus_novemcinctus
ENSPCAG00000008790	LSM12	100	99.371	ENSDORG00000016381	Lsm12	82	99.371	Dipodomys_ordii
ENSPCAG00000008790	LSM12	91	31.013	FBgn0036057	CG14164	83	31.013	Drosophila_melanogaster
ENSPCAG00000008790	LSM12	89	36.111	FBgn0030364	Lsm12	66	36.111	Drosophila_melanogaster
ENSPCAG00000008790	LSM12	100	98.742	ENSETEG00000008374	LSM12	82	98.742	Echinops_telfairi
ENSPCAG00000008790	LSM12	91	86.897	ENSETEG00000011012	-	83	86.897	Echinops_telfairi
ENSPCAG00000008790	LSM12	100	62.893	ENSEBUG00000016299	lsm12a	89	62.893	Eptatretus_burgeri
ENSPCAG00000008790	LSM12	100	99.371	ENSEASG00005010155	LSM12	82	99.371	Equus_asinus_asinus
ENSPCAG00000008790	LSM12	100	99.371	ENSECAG00000009071	LSM12	82	99.371	Equus_caballus
ENSPCAG00000008790	LSM12	77	100.000	ENSEEUG00000002419	-	80	100.000	Erinaceus_europaeus
ENSPCAG00000008790	LSM12	100	83.019	ENSELUG00000000256	-	81	83.019	Esox_lucius
ENSPCAG00000008790	LSM12	100	84.906	ENSELUG00000015538	lsm12b	81	79.245	Esox_lucius
ENSPCAG00000008790	LSM12	100	99.371	ENSFCAG00000037021	LSM12	82	99.371	Felis_catus
ENSPCAG00000008790	LSM12	74	100.000	ENSFDAG00000008954	LSM12	69	100.000	Fukomys_damarensis
ENSPCAG00000008790	LSM12	100	83.648	ENSFHEG00000019913	lsm12b	81	83.648	Fundulus_heteroclitus
ENSPCAG00000008790	LSM12	81	85.156	ENSGMOG00000015449	lsm12b	81	85.156	Gadus_morhua
ENSPCAG00000008790	LSM12	77	95.935	ENSGALG00000039803	LSM12	80	95.935	Gallus_gallus
ENSPCAG00000008790	LSM12	100	84.277	ENSGAFG00000011829	lsm12b	81	84.277	Gambusia_affinis
ENSPCAG00000008790	LSM12	81	85.938	ENSGACG00000003428	lsm12b	81	85.938	Gasterosteus_aculeatus
ENSPCAG00000008790	LSM12	100	95.597	ENSGAGG00000021965	LSM12	82	95.597	Gopherus_agassizii
ENSPCAG00000008790	LSM12	100	99.371	ENSGGOG00000010589	-	82	99.371	Gorilla_gorilla
ENSPCAG00000008790	LSM12	100	84.906	ENSHBUG00000007667	lsm12b	70	84.906	Haplochromis_burtoni
ENSPCAG00000008790	LSM12	100	99.371	ENSHGLG00000011411	LSM12	82	99.371	Heterocephalus_glaber_female
ENSPCAG00000008790	LSM12	92	84.768	ENSHGLG00100000241	LSM12	80	84.768	Heterocephalus_glaber_male
ENSPCAG00000008790	LSM12	100	84.277	ENSHCOG00000002094	lsm12b	81	84.277	Hippocampus_comes
ENSPCAG00000008790	LSM12	100	76.730	ENSIPUG00000008936	lsm12a	82	76.730	Ictalurus_punctatus
ENSPCAG00000008790	LSM12	100	85.535	ENSIPUG00000014800	lsm12	81	85.535	Ictalurus_punctatus
ENSPCAG00000008790	LSM12	100	99.371	ENSSTOG00000007403	LSM12	82	99.371	Ictidomys_tridecemlineatus
ENSPCAG00000008790	LSM12	99	84.906	ENSJJAG00000014652	-	95	84.906	Jaculus_jaculus
ENSPCAG00000008790	LSM12	100	86.250	ENSJJAG00000011793	-	84	86.250	Jaculus_jaculus
ENSPCAG00000008790	LSM12	100	98.742	ENSJJAG00000004364	-	82	98.742	Jaculus_jaculus
ENSPCAG00000008790	LSM12	100	86.164	ENSKMAG00000007704	lsm12b	54	86.164	Kryptolebias_marmoratus
ENSPCAG00000008790	LSM12	100	86.164	ENSLBEG00000027999	lsm12b	81	86.164	Labrus_bergylta
ENSPCAG00000008790	LSM12	100	91.824	ENSLACG00000015981	LSM12	82	91.824	Latimeria_chalumnae
ENSPCAG00000008790	LSM12	100	83.648	ENSLOCG00000013079	lsm12b	81	83.648	Lepisosteus_oculatus
ENSPCAG00000008790	LSM12	100	99.371	ENSLAFG00000005202	LSM12	82	99.371	Loxodonta_africana
ENSPCAG00000008790	LSM12	100	99.371	ENSMFAG00000031376	LSM12	82	99.371	Macaca_fascicularis
ENSPCAG00000008790	LSM12	53	81.481	ENSMMUG00000042106	-	67	81.481	Macaca_mulatta
ENSPCAG00000008790	LSM12	100	99.371	ENSMMUG00000006804	LSM12	82	99.371	Macaca_mulatta
ENSPCAG00000008790	LSM12	53	78.947	ENSMMUG00000038408	-	67	78.947	Macaca_mulatta
ENSPCAG00000008790	LSM12	100	99.371	ENSMNEG00000030594	-	82	99.371	Macaca_nemestrina
ENSPCAG00000008790	LSM12	100	99.371	ENSMLEG00000039934	LSM12	82	99.371	Mandrillus_leucophaeus
ENSPCAG00000008790	LSM12	100	85.535	ENSMAMG00000004279	lsm12b	81	85.535	Mastacembelus_armatus
ENSPCAG00000008790	LSM12	100	84.906	ENSMZEG00005005754	lsm12b	81	84.906	Maylandia_zebra
ENSPCAG00000008790	LSM12	100	99.371	ENSMICG00000037219	LSM12	82	99.371	Microcebus_murinus
ENSPCAG00000008790	LSM12	100	81.761	ENSMOCG00000017015	-	69	81.761	Microtus_ochrogaster
ENSPCAG00000008790	LSM12	100	99.371	ENSMOCG00000019878	-	82	99.371	Microtus_ochrogaster
ENSPCAG00000008790	LSM12	100	85.535	ENSMMOG00000020848	lsm12b	81	85.535	Mola_mola
ENSPCAG00000008790	LSM12	100	86.164	ENSMALG00000007578	lsm12b	81	86.164	Monopterus_albus
ENSPCAG00000008790	LSM12	100	99.371	MGP_CAROLIEiJ_G0017241	Lsm12	82	99.371	Mus_caroli
ENSPCAG00000008790	LSM12	100	99.371	ENSMUSG00000020922	Lsm12	82	99.371	Mus_musculus
ENSPCAG00000008790	LSM12	100	89.773	MGP_PahariEiJ_G0018371	Lsm12	74	100.000	Mus_pahari
ENSPCAG00000008790	LSM12	100	98.742	MGP_SPRETEiJ_G0018084	Lsm12	82	98.742	Mus_spretus
ENSPCAG00000008790	LSM12	100	98.742	ENSMLUG00000006391	LSM12	82	98.742	Myotis_lucifugus
ENSPCAG00000008790	LSM12	94	71.154	ENSNGAG00000015429	-	86	71.154	Nannospalax_galili
ENSPCAG00000008790	LSM12	100	99.371	ENSNGAG00000001870	Lsm12	82	99.371	Nannospalax_galili
ENSPCAG00000008790	LSM12	100	84.906	ENSNBRG00000006266	lsm12b	81	84.906	Neolamprologus_brichardi
ENSPCAG00000008790	LSM12	100	99.371	ENSNLEG00000005580	-	82	99.371	Nomascus_leucogenys
ENSPCAG00000008790	LSM12	100	97.484	ENSMEUG00000007501	-	96	97.484	Notamacropus_eugenii
ENSPCAG00000008790	LSM12	100	99.371	ENSOPRG00000008552	LSM12	82	99.371	Ochotona_princeps
ENSPCAG00000008790	LSM12	100	98.742	ENSODEG00000017998	-	82	98.742	Octodon_degus
ENSPCAG00000008790	LSM12	100	88.050	ENSODEG00000007886	-	60	88.050	Octodon_degus
ENSPCAG00000008790	LSM12	100	84.906	ENSONIG00000007933	lsm12b	81	84.906	Oreochromis_niloticus
ENSPCAG00000008790	LSM12	51	90.123	ENSOANG00000031724	-	100	90.123	Ornithorhynchus_anatinus
ENSPCAG00000008790	LSM12	100	92.453	ENSOCUG00000021254	-	82	92.453	Oryctolagus_cuniculus
ENSPCAG00000008790	LSM12	100	93.082	ENSOCUG00000027889	-	82	93.082	Oryctolagus_cuniculus
ENSPCAG00000008790	LSM12	100	91.195	ENSOCUG00000024823	-	82	91.195	Oryctolagus_cuniculus
ENSPCAG00000008790	LSM12	100	96.914	ENSOCUG00000008566	-	82	96.914	Oryctolagus_cuniculus
ENSPCAG00000008790	LSM12	100	86.164	ENSORLG00000011310	lsm12b	81	86.164	Oryzias_latipes
ENSPCAG00000008790	LSM12	100	86.164	ENSORLG00020002060	lsm12b	75	86.164	Oryzias_latipes_hni
ENSPCAG00000008790	LSM12	100	86.164	ENSORLG00015001647	lsm12b	75	86.164	Oryzias_latipes_hsok
ENSPCAG00000008790	LSM12	100	86.164	ENSOMEG00000006184	lsm12b	74	86.164	Oryzias_melastigma
ENSPCAG00000008790	LSM12	100	99.371	ENSOGAG00000010489	LSM12	82	99.371	Otolemur_garnettii
ENSPCAG00000008790	LSM12	100	95.152	ENSOARG00000006589	LSM12	82	95.152	Ovis_aries
ENSPCAG00000008790	LSM12	100	86.792	ENSPPAG00000034974	-	81	86.792	Pan_paniscus
ENSPCAG00000008790	LSM12	100	99.371	ENSPPRG00000023420	LSM12	82	99.371	Panthera_pardus
ENSPCAG00000008790	LSM12	77	100.000	ENSPTIG00000012704	-	66	100.000	Panthera_tigris_altaica
ENSPCAG00000008790	LSM12	67	95.062	ENSPTIG00000014850	-	74	95.062	Panthera_tigris_altaica
ENSPCAG00000008790	LSM12	100	99.371	ENSPTRG00000009261	LSM12	82	99.371	Pan_troglodytes
ENSPCAG00000008790	LSM12	100	99.371	ENSPANG00000021315	-	82	99.371	Papio_anubis
ENSPCAG00000008790	LSM12	100	79.874	ENSPKIG00000017932	-	81	79.874	Paramormyrops_kingsleyae
ENSPCAG00000008790	LSM12	100	86.164	ENSPKIG00000021058	lsm12b	87	86.164	Paramormyrops_kingsleyae
ENSPCAG00000008790	LSM12	100	85.535	ENSPMGG00000021344	lsm12b	81	85.535	Periophthalmus_magnuspinnatus
ENSPCAG00000008790	LSM12	100	99.371	ENSPEMG00000012199	Lsm12	82	99.371	Peromyscus_maniculatus_bairdii
ENSPCAG00000008790	LSM12	100	65.409	ENSPMAG00000005461	lsm12a	91	65.409	Petromyzon_marinus
ENSPCAG00000008790	LSM12	100	97.484	ENSPCIG00000020244	LSM12	82	97.484	Phascolarctos_cinereus
ENSPCAG00000008790	LSM12	100	83.019	ENSPFOG00000015930	lsm12b	81	83.019	Poecilia_formosa
ENSPCAG00000008790	LSM12	100	83.019	ENSPLAG00000021089	lsm12b	81	83.019	Poecilia_latipinna
ENSPCAG00000008790	LSM12	100	83.019	ENSPMEG00000012961	lsm12b	81	83.019	Poecilia_mexicana
ENSPCAG00000008790	LSM12	89	86.525	ENSPREG00000010236	lsm12b	78	86.525	Poecilia_reticulata
ENSPCAG00000008790	LSM12	100	99.371	ENSPPYG00000008344	LSM12	82	99.371	Pongo_abelii
ENSPCAG00000008790	LSM12	100	99.371	ENSPCOG00000027951	LSM12	82	99.371	Propithecus_coquereli
ENSPCAG00000008790	LSM12	100	98.742	ENSPVAG00000013706	LSM12	82	98.742	Pteropus_vampyrus
ENSPCAG00000008790	LSM12	100	84.906	ENSPNYG00000003386	lsm12b	81	84.906	Pundamilia_nyererei
ENSPCAG00000008790	LSM12	100	83.648	ENSPNAG00000004186	lsm12b	81	83.648	Pygocentrus_nattereri
ENSPCAG00000008790	LSM12	100	77.358	ENSPNAG00000018435	lsm12a	81	77.358	Pygocentrus_nattereri
ENSPCAG00000008790	LSM12	100	99.371	ENSRNOG00000020894	Lsm12	82	99.371	Rattus_norvegicus
ENSPCAG00000008790	LSM12	100	99.371	ENSRBIG00000027910	LSM12	82	99.371	Rhinopithecus_bieti
ENSPCAG00000008790	LSM12	100	99.371	ENSRROG00000045530	-	92	99.371	Rhinopithecus_roxellana
ENSPCAG00000008790	LSM12	100	51.572	ENSRROG00000000537	-	72	51.572	Rhinopithecus_roxellana
ENSPCAG00000008790	LSM12	100	99.371	ENSSBOG00000025310	LSM12	82	99.371	Saimiri_boliviensis_boliviensis
ENSPCAG00000008790	LSM12	81	95.312	ENSSHAG00000014914	LSM12	81	95.312	Sarcophilus_harrisii
ENSPCAG00000008790	LSM12	100	84.277	ENSSFOG00015020392	lsm12a	81	84.277	Scleropages_formosus
ENSPCAG00000008790	LSM12	100	85.535	ENSSFOG00015009612	lsm12	81	85.535	Scleropages_formosus
ENSPCAG00000008790	LSM12	100	85.535	ENSSMAG00000008089	lsm12b	81	85.535	Scophthalmus_maximus
ENSPCAG00000008790	LSM12	100	86.792	ENSSDUG00000012711	lsm12b	81	86.792	Seriola_dumerili
ENSPCAG00000008790	LSM12	100	86.792	ENSSLDG00000007404	lsm12b	81	86.792	Seriola_lalandi_dorsalis
ENSPCAG00000008790	LSM12	77	99.187	ENSSARG00000005537	LSM12	80	99.187	Sorex_araneus
ENSPCAG00000008790	LSM12	100	96.855	ENSSPUG00000011984	LSM12	82	96.855	Sphenodon_punctatus
ENSPCAG00000008790	LSM12	100	86.164	ENSSPAG00000017058	lsm12b	81	86.164	Stegastes_partitus
ENSPCAG00000008790	LSM12	100	99.371	ENSSSCG00000032394	LSM12	82	99.371	Sus_scrofa
ENSPCAG00000008790	LSM12	100	84.277	ENSTRUG00000007121	lsm12b	81	84.277	Takifugu_rubripes
ENSPCAG00000008790	LSM12	100	84.906	ENSTNIG00000014436	lsm12b	81	84.906	Tetraodon_nigroviridis
ENSPCAG00000008790	LSM12	100	95.597	ENSTBEG00000012392	-	82	95.597	Tupaia_belangeri
ENSPCAG00000008790	LSM12	100	99.371	ENSTBEG00000012523	-	82	99.371	Tupaia_belangeri
ENSPCAG00000008790	LSM12	100	99.371	ENSTTRG00000010433	LSM12	82	99.371	Tursiops_truncatus
ENSPCAG00000008790	LSM12	100	99.371	ENSUAMG00000006313	LSM12	82	99.371	Ursus_americanus
ENSPCAG00000008790	LSM12	81	96.094	ENSUMAG00000012987	LSM12	73	96.094	Ursus_maritimus
ENSPCAG00000008790	LSM12	100	93.082	ENSVPAG00000011145	LSM12	82	93.082	Vicugna_pacos
ENSPCAG00000008790	LSM12	100	99.371	ENSVVUG00000017581	LSM12	82	99.371	Vulpes_vulpes
ENSPCAG00000008790	LSM12	82	65.385	ENSXETG00000003371	lsm12	62	65.385	Xenopus_tropicalis
ENSPCAG00000008790	LSM12	100	84.277	ENSXCOG00000003994	lsm12b	81	84.277	Xiphophorus_couchianus
ENSPCAG00000008790	LSM12	100	84.277	ENSXMAG00000020950	lsm12b	81	84.277	Xiphophorus_maculatus