EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008938 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 35567 bases
Position: chrGeneScaffold_684:14667-50233
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008490	RRM_4	PF10598.9	3.8e-10	1	1
ENSPCAP00000008490	U5_2-snRNA_bdg	PF10597.9	4.7e-71	1	1
ENSPCAP00000008490	PRO8NT	PF08082.11	7.2e-87	1	1
ENSPCAP00000008490	U6-snRNA_bdg	PF10596.9	3.5e-63	1	1
ENSPCAP00000008490	PROCN	PF08083.11	3.8e-229	1	1
ENSPCAP00000008490	PRP8_domainIV	PF12134.8	3e-85	1	2
ENSPCAP00000008490	PRP8_domainIV	PF12134.8	3e-85	2	2
ENSPCAP00000008490	PROCT	PF08084.11	8.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009095	PRPF8-201	6975	-	ENSPCAP00000008490	2324 (aa)	-	UPI00018AE614

Gene Model

Click here to download ENSPCAG00000008938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008938	PRPF8	90	99.647	ENSG00000174231	PRPF8	90	99.647	Homo_sapiens
ENSPCAG00000008938	PRPF8	90	97.030	ENSAPOG00000010079	prpf8	90	97.030	Acanthochromis_polyacanthus
ENSPCAG00000008938	PRPF8	90	99.647	ENSAMEG00000007940	PRPF8	90	99.647	Ailuropoda_melanoleuca
ENSPCAG00000008938	PRPF8	88	96.782	ENSACIG00000018280	prpf8	88	96.782	Amphilophus_citrinellus
ENSPCAG00000008938	PRPF8	90	97.030	ENSAOCG00000010725	prpf8	90	97.030	Amphiprion_ocellaris
ENSPCAG00000008938	PRPF8	90	97.030	ENSAPEG00000014397	prpf8	90	97.030	Amphiprion_percula
ENSPCAG00000008938	PRPF8	90	95.311	ENSATEG00000010062	prpf8	90	95.545	Anabas_testudineus
ENSPCAG00000008938	PRPF8	86	99.010	ENSAPLG00000010357	PRPF8	90	99.010	Anas_platyrhynchos
ENSPCAG00000008938	PRPF8	73	97.887	ENSACAG00000014784	PRPF8	88	97.887	Anolis_carolinensis
ENSPCAG00000008938	PRPF8	90	99.647	ENSANAG00000032629	PRPF8	90	99.647	Aotus_nancymaae
ENSPCAG00000008938	PRPF8	90	97.030	ENSACLG00000020858	prpf8	90	97.030	Astatotilapia_calliptera
ENSPCAG00000008938	PRPF8	90	96.782	ENSAMXG00000020291	prpf8	90	96.782	Astyanax_mexicanus
ENSPCAG00000008938	PRPF8	90	99.647	ENSBTAG00000011488	PRPF8	90	99.647	Bos_taurus
ENSPCAG00000008938	PRPF8	90	85.849	WBGene00004187	prp-8	90	86.203	Caenorhabditis_elegans
ENSPCAG00000008938	PRPF8	90	99.647	ENSCJAG00000001911	PRPF8	90	99.647	Callithrix_jacchus
ENSPCAG00000008938	PRPF8	90	99.647	ENSCAFG00000019221	PRPF8	90	99.647	Canis_familiaris
ENSPCAG00000008938	PRPF8	86	99.603	ENSCAFG00020009943	PRPF8	90	99.603	Canis_lupus_dingo
ENSPCAG00000008938	PRPF8	90	99.647	ENSCHIG00000017499	PRPF8	90	99.647	Capra_hircus
ENSPCAG00000008938	PRPF8	90	99.647	ENSTSYG00000014120	PRPF8	90	99.647	Carlito_syrichta
ENSPCAG00000008938	PRPF8	86	99.605	ENSCAPG00000009459	PRPF8	89	99.605	Cavia_aperea
ENSPCAG00000008938	PRPF8	90	99.647	ENSCPOG00000010379	PRPF8	90	99.647	Cavia_porcellus
ENSPCAG00000008938	PRPF8	90	99.647	ENSCCAG00000031983	-	90	99.647	Cebus_capucinus
ENSPCAG00000008938	PRPF8	90	99.647	ENSCATG00000038595	PRPF8	90	99.647	Cercocebus_atys
ENSPCAG00000008938	PRPF8	90	99.647	ENSCLAG00000004388	PRPF8	90	99.647	Chinchilla_lanigera
ENSPCAG00000008938	PRPF8	90	99.647	ENSCSAG00000013929	PRPF8	90	99.647	Chlorocebus_sabaeus
ENSPCAG00000008938	PRPF8	71	99.738	ENSCHOG00000008590	PRPF8	77	99.738	Choloepus_hoffmanni
ENSPCAG00000008938	PRPF8	90	99.010	ENSCPBG00000020409	PRPF8	90	99.010	Chrysemys_picta_bellii
ENSPCAG00000008938	PRPF8	88	93.542	ENSCSAVG00000007825	-	100	89.844	Ciona_savignyi
ENSPCAG00000008938	PRPF8	90	99.647	ENSCANG00000043088	PRPF8	90	99.647	Colobus_angolensis_palliatus
ENSPCAG00000008938	PRPF8	66	99.287	ENSCGRG00000005129	Prpf8	90	99.287	Cricetulus_griseus_crigri
ENSPCAG00000008938	PRPF8	90	96.535	ENSCSEG00000007905	prpf8	90	96.535	Cynoglossus_semilaevis
ENSPCAG00000008938	PRPF8	90	97.030	ENSDARG00000026180	prpf8	89	98.066	Danio_rerio
ENSPCAG00000008938	PRPF8	83	99.647	ENSDNOG00000018471	PRPF8	89	99.647	Dasypus_novemcinctus
ENSPCAG00000008938	PRPF8	73	98.718	ENSDORG00000006185	Prpf8	86	98.718	Dipodomys_ordii
ENSPCAG00000008938	PRPF8	90	89.138	FBgn0033688	Prp8	88	89.492	Drosophila_melanogaster
ENSPCAG00000008938	PRPF8	90	93.412	ENSETEG00000017592	PRPF8	90	93.412	Echinops_telfairi
ENSPCAG00000008938	PRPF8	87	94.377	ENSEBUG00000006548	prpf8	90	94.059	Eptatretus_burgeri
ENSPCAG00000008938	PRPF8	90	99.647	ENSEASG00005009514	PRPF8	90	99.647	Equus_asinus_asinus
ENSPCAG00000008938	PRPF8	87	99.620	ENSECAG00000021318	PRPF8	90	99.620	Equus_caballus
ENSPCAG00000008938	PRPF8	62	100.000	ENSEEUG00000012120	-	62	100.000	Erinaceus_europaeus
ENSPCAG00000008938	PRPF8	88	94.959	ENSELUG00000007120	prpf8	89	95.428	Esox_lucius
ENSPCAG00000008938	PRPF8	90	99.647	ENSFCAG00000006297	PRPF8	90	99.647	Felis_catus
ENSPCAG00000008938	PRPF8	90	99.010	ENSFALG00000006628	PRPF8	90	99.010	Ficedula_albicollis
ENSPCAG00000008938	PRPF8	90	99.647	ENSFDAG00000004711	PRPF8	90	99.647	Fukomys_damarensis
ENSPCAG00000008938	PRPF8	90	96.287	ENSFHEG00000021084	prpf8	90	96.287	Fundulus_heteroclitus
ENSPCAG00000008938	PRPF8	89	95.913	ENSGMOG00000002028	prpf8	90	94.842	Gadus_morhua
ENSPCAG00000008938	PRPF8	90	99.010	ENSGALG00000002943	PRPF8	90	99.010	Gallus_gallus
ENSPCAG00000008938	PRPF8	89	96.635	ENSGAFG00000010337	prpf8	90	96.287	Gambusia_affinis
ENSPCAG00000008938	PRPF8	90	96.782	ENSGACG00000008504	prpf8	90	96.782	Gasterosteus_aculeatus
ENSPCAG00000008938	PRPF8	90	99.010	ENSGAGG00000008350	PRPF8	90	99.010	Gopherus_agassizii
ENSPCAG00000008938	PRPF8	90	99.647	ENSGGOG00000005516	PRPF8	90	99.647	Gorilla_gorilla
ENSPCAG00000008938	PRPF8	90	97.030	ENSHBUG00000016192	prpf8	90	97.030	Haplochromis_burtoni
ENSPCAG00000008938	PRPF8	90	99.647	ENSHGLG00000012029	PRPF8	90	99.647	Heterocephalus_glaber_female
ENSPCAG00000008938	PRPF8	90	99.647	ENSHGLG00100016494	PRPF8	90	99.647	Heterocephalus_glaber_male
ENSPCAG00000008938	PRPF8	90	96.535	ENSHCOG00000016414	prpf8	90	96.535	Hippocampus_comes
ENSPCAG00000008938	PRPF8	90	97.030	ENSIPUG00000023230	prpf8	90	97.030	Ictalurus_punctatus
ENSPCAG00000008938	PRPF8	90	99.647	ENSSTOG00000005128	PRPF8	90	99.647	Ictidomys_tridecemlineatus
ENSPCAG00000008938	PRPF8	90	99.647	ENSJJAG00000021159	Prpf8	90	99.647	Jaculus_jaculus
ENSPCAG00000008938	PRPF8	89	96.782	ENSKMAG00000016118	prpf8	89	96.782	Kryptolebias_marmoratus
ENSPCAG00000008938	PRPF8	90	96.782	ENSLBEG00000026903	prpf8	90	96.782	Labrus_bergylta
ENSPCAG00000008938	PRPF8	85	97.535	ENSLACG00000010479	PRPF8	89	98.246	Latimeria_chalumnae
ENSPCAG00000008938	PRPF8	90	97.030	ENSLOCG00000005409	prpf8	90	97.030	Lepisosteus_oculatus
ENSPCAG00000008938	PRPF8	90	99.647	ENSLAFG00000015445	PRPF8	90	99.647	Loxodonta_africana
ENSPCAG00000008938	PRPF8	90	99.647	ENSMFAG00000039995	PRPF8	90	99.647	Macaca_fascicularis
ENSPCAG00000008938	PRPF8	90	99.647	ENSMMUG00000004820	PRPF8	90	99.647	Macaca_mulatta
ENSPCAG00000008938	PRPF8	90	99.647	ENSMNEG00000035713	PRPF8	90	99.647	Macaca_nemestrina
ENSPCAG00000008938	PRPF8	90	99.647	ENSMLEG00000037937	PRPF8	90	99.647	Mandrillus_leucophaeus
ENSPCAG00000008938	PRPF8	90	96.782	ENSMAMG00000008919	prpf8	90	96.782	Mastacembelus_armatus
ENSPCAG00000008938	PRPF8	90	97.030	ENSMZEG00005015073	prpf8	90	97.030	Maylandia_zebra
ENSPCAG00000008938	PRPF8	90	99.010	ENSMGAG00000004769	PRPF8	90	99.010	Meleagris_gallopavo
ENSPCAG00000008938	PRPF8	90	99.647	ENSMICG00000010320	PRPF8	90	99.647	Microcebus_murinus
ENSPCAG00000008938	PRPF8	90	99.647	ENSMOCG00000016838	Prpf8	90	99.647	Microtus_ochrogaster
ENSPCAG00000008938	PRPF8	90	97.030	ENSMMOG00000011887	prpf8	90	97.030	Mola_mola
ENSPCAG00000008938	PRPF8	90	99.529	ENSMODG00000010480	PRPF8	90	99.529	Monodelphis_domestica
ENSPCAG00000008938	PRPF8	87	96.287	ENSMALG00000003558	prpf8	90	96.287	Monopterus_albus
ENSPCAG00000008938	PRPF8	90	99.647	MGP_CAROLIEiJ_G0016740	Prpf8	90	99.647	Mus_caroli
ENSPCAG00000008938	PRPF8	90	99.647	ENSMUSG00000020850	Prpf8	90	99.647	Mus_musculus
ENSPCAG00000008938	PRPF8	90	99.529	MGP_PahariEiJ_G0017877	Prpf8	90	99.529	Mus_pahari
ENSPCAG00000008938	PRPF8	90	99.647	MGP_SPRETEiJ_G0017583	Prpf8	90	99.647	Mus_spretus
ENSPCAG00000008938	PRPF8	90	99.647	ENSMPUG00000013227	PRPF8	90	99.647	Mustela_putorius_furo
ENSPCAG00000008938	PRPF8	90	99.529	ENSMLUG00000002666	PRPF8	90	99.529	Myotis_lucifugus
ENSPCAG00000008938	PRPF8	90	99.647	ENSNGAG00000005305	Prpf8	90	99.647	Nannospalax_galili
ENSPCAG00000008938	PRPF8	90	97.030	ENSNBRG00000013127	prpf8	90	97.030	Neolamprologus_brichardi
ENSPCAG00000008938	PRPF8	87	96.040	ENSNLEG00000000897	PRPF8	88	96.040	Nomascus_leucogenys
ENSPCAG00000008938	PRPF8	88	99.632	ENSMEUG00000015999	PRPF8	89	99.632	Notamacropus_eugenii
ENSPCAG00000008938	PRPF8	90	99.257	ENSOPRG00000003102	PRPF8	90	99.257	Ochotona_princeps
ENSPCAG00000008938	PRPF8	90	99.647	ENSODEG00000008468	PRPF8	90	99.647	Octodon_degus
ENSPCAG00000008938	PRPF8	90	97.030	ENSONIG00000008153	prpf8	90	97.030	Oreochromis_niloticus
ENSPCAG00000008938	PRPF8	73	99.424	ENSOANG00000004250	PRPF8	87	99.424	Ornithorhynchus_anatinus
ENSPCAG00000008938	PRPF8	90	99.647	ENSOCUG00000000081	PRPF8	90	99.647	Oryctolagus_cuniculus
ENSPCAG00000008938	PRPF8	89	96.782	ENSORLG00000008036	prpf8	90	96.782	Oryzias_latipes
ENSPCAG00000008938	PRPF8	89	96.782	ENSORLG00020021070	prpf8	89	96.782	Oryzias_latipes_hni
ENSPCAG00000008938	PRPF8	89	96.782	ENSORLG00015002340	prpf8	89	96.782	Oryzias_latipes_hsok
ENSPCAG00000008938	PRPF8	89	96.981	ENSOMEG00000016866	prpf8	89	95.878	Oryzias_melastigma
ENSPCAG00000008938	PRPF8	90	99.647	ENSOARG00000013312	PRPF8	90	99.647	Ovis_aries
ENSPCAG00000008938	PRPF8	90	99.647	ENSPPAG00000042753	PRPF8	90	99.647	Pan_paniscus
ENSPCAG00000008938	PRPF8	90	99.647	ENSPPRG00000008746	PRPF8	90	99.647	Panthera_pardus
ENSPCAG00000008938	PRPF8	90	99.647	ENSPTIG00000019200	PRPF8	90	99.647	Panthera_tigris_altaica
ENSPCAG00000008938	PRPF8	90	99.647	ENSPTRG00000039576	PRPF8	90	99.647	Pan_troglodytes
ENSPCAG00000008938	PRPF8	90	99.505	ENSPANG00000024607	PRPF8	89	99.505	Papio_anubis
ENSPCAG00000008938	PRPF8	90	97.030	ENSPKIG00000011201	prpf8	90	97.030	Paramormyrops_kingsleyae
ENSPCAG00000008938	PRPF8	90	99.010	ENSPSIG00000013393	PRPF8	90	99.010	Pelodiscus_sinensis
ENSPCAG00000008938	PRPF8	90	99.647	ENSPEMG00000021699	Prpf8	90	99.647	Peromyscus_maniculatus_bairdii
ENSPCAG00000008938	PRPF8	86	93.317	ENSPMAG00000005438	prpf8	90	93.317	Petromyzon_marinus
ENSPCAG00000008938	PRPF8	90	99.529	ENSPCIG00000022603	PRPF8	90	99.603	Phascolarctos_cinereus
ENSPCAG00000008938	PRPF8	90	96.287	ENSPFOG00000007005	prpf8	90	96.287	Poecilia_formosa
ENSPCAG00000008938	PRPF8	90	96.287	ENSPLAG00000020777	prpf8	90	96.287	Poecilia_latipinna
ENSPCAG00000008938	PRPF8	90	96.287	ENSPMEG00000004051	prpf8	90	96.287	Poecilia_mexicana
ENSPCAG00000008938	PRPF8	90	96.040	ENSPREG00000021902	prpf8	90	96.040	Poecilia_reticulata
ENSPCAG00000008938	PRPF8	90	99.647	ENSPPYG00000007777	PRPF8	90	99.647	Pongo_abelii
ENSPCAG00000008938	PRPF8	90	99.647	ENSPCOG00000015182	PRPF8	90	99.647	Propithecus_coquereli
ENSPCAG00000008938	PRPF8	83	100.000	ENSPVAG00000002134	PRPF8	83	100.000	Pteropus_vampyrus
ENSPCAG00000008938	PRPF8	90	97.030	ENSPNYG00000016356	prpf8	90	97.030	Pundamilia_nyererei
ENSPCAG00000008938	PRPF8	90	96.782	ENSPNAG00000009247	prpf8	90	96.782	Pygocentrus_nattereri
ENSPCAG00000008938	PRPF8	90	99.647	ENSRNOG00000003495	Prpf8	90	99.647	Rattus_norvegicus
ENSPCAG00000008938	PRPF8	90	99.647	ENSRBIG00000031219	PRPF8	90	99.647	Rhinopithecus_bieti
ENSPCAG00000008938	PRPF8	90	99.647	ENSRROG00000038014	PRPF8	90	99.647	Rhinopithecus_roxellana
ENSPCAG00000008938	PRPF8	89	66.234	YHR165C	PRP8	86	66.234	Saccharomyces_cerevisiae
ENSPCAG00000008938	PRPF8	90	99.647	ENSSBOG00000029717	PRPF8	90	99.647	Saimiri_boliviensis_boliviensis
ENSPCAG00000008938	PRPF8	90	99.529	ENSSHAG00000006167	PRPF8	90	99.529	Sarcophilus_harrisii
ENSPCAG00000008938	PRPF8	90	97.030	ENSSFOG00015013905	prpf8	90	97.030	Scleropages_formosus
ENSPCAG00000008938	PRPF8	90	96.782	ENSSMAG00000017736	prpf8	90	96.782	Scophthalmus_maximus
ENSPCAG00000008938	PRPF8	90	97.030	ENSSDUG00000003029	prpf8	90	97.030	Seriola_dumerili
ENSPCAG00000008938	PRPF8	58	99.115	ENSSLDG00000017096	prpf8	85	99.115	Seriola_lalandi_dorsalis
ENSPCAG00000008938	PRPF8	82	99.244	ENSSARG00000002892	PRPF8	82	99.244	Sorex_araneus
ENSPCAG00000008938	PRPF8	90	98.762	ENSSPUG00000007463	PRPF8	90	98.762	Sphenodon_punctatus
ENSPCAG00000008938	PRPF8	90	97.030	ENSSPAG00000015639	prpf8	90	97.030	Stegastes_partitus
ENSPCAG00000008938	PRPF8	90	99.647	ENSSSCG00000017817	PRPF8	90	99.647	Sus_scrofa
ENSPCAG00000008938	PRPF8	90	99.010	ENSTGUG00000005648	-	90	99.010	Taeniopygia_guttata
ENSPCAG00000008938	PRPF8	90	96.535	ENSTRUG00000015906	prpf8	90	96.535	Takifugu_rubripes
ENSPCAG00000008938	PRPF8	85	97.884	ENSTNIG00000003460	prpf8	89	97.884	Tetraodon_nigroviridis
ENSPCAG00000008938	PRPF8	85	99.380	ENSTBEG00000006431	PRPF8	85	99.380	Tupaia_belangeri
ENSPCAG00000008938	PRPF8	90	99.505	ENSTTRG00000006869	PRPF8	90	99.505	Tursiops_truncatus
ENSPCAG00000008938	PRPF8	90	99.505	ENSUMAG00000009385	PRPF8	90	99.505	Ursus_maritimus
ENSPCAG00000008938	PRPF8	64	100.000	ENSVPAG00000006063	-	64	100.000	Vicugna_pacos
ENSPCAG00000008938	PRPF8	90	99.647	ENSVVUG00000021695	PRPF8	89	99.647	Vulpes_vulpes
ENSPCAG00000008938	PRPF8	90	98.020	ENSXETG00000022259	prpf8	90	98.020	Xenopus_tropicalis
ENSPCAG00000008938	PRPF8	90	96.287	ENSXCOG00000012775	prpf8	90	96.287	Xiphophorus_couchianus
ENSPCAG00000008938	PRPF8	90	96.040	ENSXMAG00000008505	prpf8	90	96.040	Xiphophorus_maculatus