EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000008960 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 68518 bases
Position: chrGeneScaffold_7162:3480-71997
Accession: 1058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008420	HRDC	PF00570.23	9.9e-13	1	1
ENSPCAP00000008420	BDHCT	PF08072.11	9.3e-17	1	1
ENSPCAP00000008420	DEAD	PF00270.29	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009018	BLM-201	4236	-	ENSPCAP00000008420	1411 (aa)	-	UPI00018AEEC1

Gene Model

Click here to download ENSPCAG00000008960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000008960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000008960	BLM	73	93.939	ENSG00000197299	BLM	73	93.939	Homo_sapiens
ENSPCAG00000008960	BLM	60	60.542	ENSAPOG00000017966	blm	62	60.777	Acanthochromis_polyacanthus
ENSPCAG00000008960	BLM	73	93.548	ENSAMEG00000013843	BLM	73	93.548	Ailuropoda_melanoleuca
ENSPCAG00000008960	BLM	59	60.407	ENSACIG00000023762	blm	59	60.407	Amphilophus_citrinellus
ENSPCAG00000008960	BLM	60	60.353	ENSAOCG00000003318	blm	61	60.588	Amphiprion_ocellaris
ENSPCAG00000008960	BLM	59	61.483	ENSAPEG00000018105	blm	59	60.588	Amphiprion_percula
ENSPCAG00000008960	BLM	55	63.579	ENSATEG00000006421	blm	57	63.488	Anabas_testudineus
ENSPCAG00000008960	BLM	70	64.806	ENSAPLG00000006878	BLM	82	65.273	Anas_platyrhynchos
ENSPCAG00000008960	BLM	58	69.670	ENSACAG00000014275	BLM	63	69.670	Anolis_carolinensis
ENSPCAG00000008960	BLM	73	93.939	ENSANAG00000038415	BLM	73	93.939	Aotus_nancymaae
ENSPCAG00000008960	BLM	59	60.592	ENSACLG00000020354	blm	59	60.808	Astatotilapia_calliptera
ENSPCAG00000008960	BLM	60	59.698	ENSAMXG00000016970	blm	59	60.093	Astyanax_mexicanus
ENSPCAG00000008960	BLM	65	93.939	ENSBTAG00000020301	BLM	70	93.939	Bos_taurus
ENSPCAG00000008960	BLM	73	96.970	ENSCJAG00000009803	BLM	73	96.970	Callithrix_jacchus
ENSPCAG00000008960	BLM	73	87.879	ENSCAFG00000012385	BLM	73	87.879	Canis_familiaris
ENSPCAG00000008960	BLM	73	87.879	ENSCAFG00020016111	BLM	94	86.785	Canis_lupus_dingo
ENSPCAG00000008960	BLM	73	90.909	ENSCHIG00000010329	BLM	73	90.909	Capra_hircus
ENSPCAG00000008960	BLM	73	90.909	ENSTSYG00000012368	BLM	74	90.909	Carlito_syrichta
ENSPCAG00000008960	BLM	64	80.386	ENSCAPG00000017976	BLM	74	80.386	Cavia_aperea
ENSPCAG00000008960	BLM	73	87.097	ENSCPOG00000001761	BLM	73	87.097	Cavia_porcellus
ENSPCAG00000008960	BLM	73	93.939	ENSCCAG00000023069	BLM	73	93.939	Cebus_capucinus
ENSPCAG00000008960	BLM	73	93.939	ENSCATG00000040609	BLM	92	89.757	Cercocebus_atys
ENSPCAG00000008960	BLM	73	90.323	ENSCLAG00000012111	BLM	73	90.323	Chinchilla_lanigera
ENSPCAG00000008960	BLM	73	93.939	ENSCSAG00000017040	BLM	73	93.939	Chlorocebus_sabaeus
ENSPCAG00000008960	BLM	64	80.632	ENSCHOG00000006255	BLM	66	81.263	Choloepus_hoffmanni
ENSPCAG00000008960	BLM	71	65.202	ENSCPBG00000025000	BLM	84	65.157	Chrysemys_picta_bellii
ENSPCAG00000008960	BLM	57	90.909	ENSCANG00000034808	BLM	67	90.909	Colobus_angolensis_palliatus
ENSPCAG00000008960	BLM	73	82.844	ENSCGRG00001024897	Blm	73	82.844	Cricetulus_griseus_chok1gshd
ENSPCAG00000008960	BLM	67	60.744	ENSCSEG00000013483	blm	62	60.964	Cynoglossus_semilaevis
ENSPCAG00000008960	BLM	69	57.631	ENSDARG00000077089	blm	66	61.207	Danio_rerio
ENSPCAG00000008960	BLM	73	96.970	ENSDNOG00000010159	BLM	73	96.970	Dasypus_novemcinctus
ENSPCAG00000008960	BLM	60	81.733	ENSDORG00000011033	Blm	82	82.084	Dipodomys_ordii
ENSPCAG00000008960	BLM	51	40.346	FBgn0002906	Blm	51	39.464	Drosophila_melanogaster
ENSPCAG00000008960	BLM	60	93.548	ENSETEG00000015019	BLM	59	93.548	Echinops_telfairi
ENSPCAG00000008960	BLM	73	90.909	ENSEASG00005006727	BLM	73	90.909	Equus_asinus_asinus
ENSPCAG00000008960	BLM	72	90.909	ENSECAG00000011405	BLM	73	90.909	Equus_caballus
ENSPCAG00000008960	BLM	69	83.943	ENSEEUG00000001434	BLM	71	83.882	Erinaceus_europaeus
ENSPCAG00000008960	BLM	63	63.079	ENSELUG00000019098	blm	59	65.625	Esox_lucius
ENSPCAG00000008960	BLM	73	90.909	ENSFCAG00000006087	BLM	73	90.909	Felis_catus
ENSPCAG00000008960	BLM	70	62.959	ENSFALG00000010981	BLM	76	64.543	Ficedula_albicollis
ENSPCAG00000008960	BLM	74	87.097	ENSFDAG00000012658	BLM	73	87.097	Fukomys_damarensis
ENSPCAG00000008960	BLM	61	59.148	ENSFHEG00000002553	blm	60	59.976	Fundulus_heteroclitus
ENSPCAG00000008960	BLM	65	59.823	ENSGMOG00000016431	blm	98	55.140	Gadus_morhua
ENSPCAG00000008960	BLM	70	64.686	ENSGALG00000008256	BLM	70	64.994	Gallus_gallus
ENSPCAG00000008960	BLM	59	60.602	ENSGAFG00000001117	blm	62	60.843	Gambusia_affinis
ENSPCAG00000008960	BLM	55	62.628	ENSGACG00000010863	blm	100	70.644	Gasterosteus_aculeatus
ENSPCAG00000008960	BLM	59	68.466	ENSGAGG00000005383	BLM	78	68.331	Gopherus_agassizii
ENSPCAG00000008960	BLM	73	93.939	ENSGGOG00000007710	BLM	92	90.080	Gorilla_gorilla
ENSPCAG00000008960	BLM	59	60.308	ENSHBUG00000015943	blm	60	60.808	Haplochromis_burtoni
ENSPCAG00000008960	BLM	74	90.323	ENSHGLG00000013231	BLM	73	90.323	Heterocephalus_glaber_female
ENSPCAG00000008960	BLM	61	59.306	ENSHCOG00000011455	blm	83	60.096	Hippocampus_comes
ENSPCAG00000008960	BLM	61	58.796	ENSIPUG00000000529	blm	67	62.197	Ictalurus_punctatus
ENSPCAG00000008960	BLM	73	87.879	ENSSTOG00000005000	BLM	73	87.879	Ictidomys_tridecemlineatus
ENSPCAG00000008960	BLM	64	76.552	ENSJJAG00000016322	Blm	87	77.126	Jaculus_jaculus
ENSPCAG00000008960	BLM	60	59.306	ENSKMAG00000016608	blm	60	60.304	Kryptolebias_marmoratus
ENSPCAG00000008960	BLM	67	66.197	ENSLACG00000006490	BLM	66	66.197	Latimeria_chalumnae
ENSPCAG00000008960	BLM	66	61.649	ENSLOCG00000014302	blm	68	61.051	Lepisosteus_oculatus
ENSPCAG00000008960	BLM	73	93.939	ENSMFAG00000042982	BLM	92	90.296	Macaca_fascicularis
ENSPCAG00000008960	BLM	73	93.939	ENSMMUG00000019526	BLM	92	90.296	Macaca_mulatta
ENSPCAG00000008960	BLM	67	85.194	ENSMNEG00000031251	BLM	92	90.027	Macaca_nemestrina
ENSPCAG00000008960	BLM	73	93.939	ENSMLEG00000032934	BLM	73	93.939	Mandrillus_leucophaeus
ENSPCAG00000008960	BLM	60	60.301	ENSMAMG00000008726	blm	61	60.581	Mastacembelus_armatus
ENSPCAG00000008960	BLM	59	60.190	ENSMZEG00005022323	blm	59	60.523	Maylandia_zebra
ENSPCAG00000008960	BLM	73	82.844	ENSMAUG00000008953	Blm	73	82.844	Mesocricetus_auratus
ENSPCAG00000008960	BLM	73	90.909	ENSMICG00000034442	BLM	73	90.909	Microcebus_murinus
ENSPCAG00000008960	BLM	73	81.818	ENSMOCG00000016367	Blm	73	81.818	Microtus_ochrogaster
ENSPCAG00000008960	BLM	60	59.371	ENSMMOG00000006959	blm	60	59.906	Mola_mola
ENSPCAG00000008960	BLM	71	77.491	ENSMODG00000019449	BLM	72	77.960	Monodelphis_domestica
ENSPCAG00000008960	BLM	59	61.493	ENSMALG00000007323	blm	59	61.493	Monopterus_albus
ENSPCAG00000008960	BLM	74	83.871	MGP_CAROLIEiJ_G0029907	Blm	74	83.871	Mus_caroli
ENSPCAG00000008960	BLM	73	83.871	ENSMUSG00000030528	Blm	72	83.871	Mus_musculus
ENSPCAG00000008960	BLM	73	87.097	MGP_PahariEiJ_G0013129	Blm	73	87.097	Mus_pahari
ENSPCAG00000008960	BLM	73	83.871	MGP_SPRETEiJ_G0031009	Blm	72	83.871	Mus_spretus
ENSPCAG00000008960	BLM	57	87.879	ENSMPUG00000015657	BLM	67	87.879	Mustela_putorius_furo
ENSPCAG00000008960	BLM	73	90.909	ENSMLUG00000014697	BLM	74	90.909	Myotis_lucifugus
ENSPCAG00000008960	BLM	74	84.848	ENSNGAG00000001275	Blm	74	84.848	Nannospalax_galili
ENSPCAG00000008960	BLM	60	59.813	ENSNBRG00000019702	blm	59	60.523	Neolamprologus_brichardi
ENSPCAG00000008960	BLM	73	93.939	ENSNLEG00000012087	BLM	73	93.939	Nomascus_leucogenys
ENSPCAG00000008960	BLM	73	69.697	ENSMEUG00000007253	BLM	73	69.697	Notamacropus_eugenii
ENSPCAG00000008960	BLM	68	81.994	ENSOPRG00000011667	BLM	69	81.994	Ochotona_princeps
ENSPCAG00000008960	BLM	63	75.825	ENSODEG00000015373	BLM	86	75.793	Octodon_degus
ENSPCAG00000008960	BLM	59	60.542	ENSONIG00000015193	blm	59	60.875	Oreochromis_niloticus
ENSPCAG00000008960	BLM	54	79.948	ENSOANG00000009316	-	99	79.948	Ornithorhynchus_anatinus
ENSPCAG00000008960	BLM	73	81.818	ENSOCUG00000013969	BLM	73	81.818	Oryctolagus_cuniculus
ENSPCAG00000008960	BLM	59	61.584	ENSORLG00000008110	blm	60	61.374	Oryzias_latipes
ENSPCAG00000008960	BLM	59	61.820	ENSORLG00020004812	blm	60	61.820	Oryzias_latipes_hni
ENSPCAG00000008960	BLM	61	59.931	ENSORLG00015018640	blm	84	60.279	Oryzias_latipes_hsok
ENSPCAG00000008960	BLM	59	60.624	ENSOMEG00000023545	blm	59	60.744	Oryzias_melastigma
ENSPCAG00000008960	BLM	73	87.097	ENSOGAG00000005708	BLM	73	87.097	Otolemur_garnettii
ENSPCAG00000008960	BLM	73	90.909	ENSOARG00000012875	BLM	72	90.909	Ovis_aries
ENSPCAG00000008960	BLM	73	93.939	ENSPPAG00000032173	BLM	73	93.939	Pan_paniscus
ENSPCAG00000008960	BLM	73	90.909	ENSPPRG00000002471	BLM	73	90.909	Panthera_pardus
ENSPCAG00000008960	BLM	73	90.909	ENSPTIG00000016168	BLM	72	90.909	Panthera_tigris_altaica
ENSPCAG00000008960	BLM	73	93.939	ENSPTRG00000007460	BLM	73	93.939	Pan_troglodytes
ENSPCAG00000008960	BLM	73	93.939	ENSPANG00000018572	BLM	92	90.027	Papio_anubis
ENSPCAG00000008960	BLM	59	61.401	ENSPKIG00000008954	blm	58	61.702	Paramormyrops_kingsleyae
ENSPCAG00000008960	BLM	51	64.958	ENSPMGG00000006629	blm	80	64.958	Periophthalmus_magnuspinnatus
ENSPCAG00000008960	BLM	73	82.981	ENSPEMG00000017348	Blm	73	82.981	Peromyscus_maniculatus_bairdii
ENSPCAG00000008960	BLM	50	57.865	ENSPMAG00000000445	blm	96	57.865	Petromyzon_marinus
ENSPCAG00000008960	BLM	71	76.056	ENSPCIG00000006609	BLM	71	76.643	Phascolarctos_cinereus
ENSPCAG00000008960	BLM	63	63.415	ENSPFOG00000005059	blm	57	63.486	Poecilia_formosa
ENSPCAG00000008960	BLM	59	60.676	ENSPLAG00000017344	blm	59	60.917	Poecilia_latipinna
ENSPCAG00000008960	BLM	55	63.232	ENSPMEG00000000321	blm	57	63.486	Poecilia_mexicana
ENSPCAG00000008960	BLM	59	60.314	ENSPREG00000007715	blm	59	60.917	Poecilia_reticulata
ENSPCAG00000008960	BLM	73	93.939	ENSPPYG00000006784	BLM	74	93.939	Pongo_abelii
ENSPCAG00000008960	BLM	75	90.909	ENSPCOG00000000439	BLM	72	90.909	Propithecus_coquereli
ENSPCAG00000008960	BLM	63	95.652	ENSPVAG00000011642	BLM	64	94.194	Pteropus_vampyrus
ENSPCAG00000008960	BLM	59	49.057	ENSPNYG00000010956	blm	57	49.465	Pundamilia_nyererei
ENSPCAG00000008960	BLM	59	62.201	ENSPNAG00000011714	blm	59	61.910	Pygocentrus_nattereri
ENSPCAG00000008960	BLM	73	80.634	ENSRNOG00000011213	Blm	74	80.634	Rattus_norvegicus
ENSPCAG00000008960	BLM	71	90.909	ENSRBIG00000029656	BLM	92	88.679	Rhinopithecus_bieti
ENSPCAG00000008960	BLM	73	90.909	ENSRROG00000037871	BLM	92	88.679	Rhinopithecus_roxellana
ENSPCAG00000008960	BLM	63	93.939	ENSSBOG00000030957	BLM	69	93.939	Saimiri_boliviensis_boliviensis
ENSPCAG00000008960	BLM	71	75.441	ENSSHAG00000007988	BLM	72	76.028	Sarcophilus_harrisii
ENSPCAG00000008960	BLM	57	60.949	ENSSFOG00015015462	blm	67	60.000	Scleropages_formosus
ENSPCAG00000008960	BLM	59	60.766	ENSSMAG00000001120	blm	60	61.171	Scophthalmus_maximus
ENSPCAG00000008960	BLM	59	61.456	ENSSDUG00000010955	blm	59	61.283	Seriola_dumerili
ENSPCAG00000008960	BLM	59	60.331	ENSSLDG00000000634	blm	59	60.331	Seriola_lalandi_dorsalis
ENSPCAG00000008960	BLM	67	77.922	ENSSARG00000006398	BLM	72	78.471	Sorex_araneus
ENSPCAG00000008960	BLM	65	62.128	ENSSPUG00000000013	BLM	84	63.294	Sphenodon_punctatus
ENSPCAG00000008960	BLM	59	61.529	ENSSPAG00000013999	blm	58	61.529	Stegastes_partitus
ENSPCAG00000008960	BLM	73	96.970	ENSSSCG00000001816	BLM	72	96.970	Sus_scrofa
ENSPCAG00000008960	BLM	70	57.943	ENSTGUG00000009959	-	85	58.363	Taeniopygia_guttata
ENSPCAG00000008960	BLM	55	62.025	ENSTRUG00000019860	blm	60	59.905	Takifugu_rubripes
ENSPCAG00000008960	BLM	59	59.736	ENSTNIG00000019246	blm	60	59.736	Tetraodon_nigroviridis
ENSPCAG00000008960	BLM	53	78.639	ENSTBEG00000006706	BLM	55	78.639	Tupaia_belangeri
ENSPCAG00000008960	BLM	73	90.909	ENSTTRG00000016386	BLM	73	90.909	Tursiops_truncatus
ENSPCAG00000008960	BLM	73	93.548	ENSUMAG00000009105	BLM	96	87.363	Ursus_maritimus
ENSPCAG00000008960	BLM	73	93.939	ENSVPAG00000000085	BLM	73	93.939	Vicugna_pacos
ENSPCAG00000008960	BLM	73	90.909	ENSVVUG00000006402	BLM	73	90.909	Vulpes_vulpes
ENSPCAG00000008960	BLM	69	65.675	ENSXETG00000007847	blm	62	70.860	Xenopus_tropicalis
ENSPCAG00000008960	BLM	59	57.590	ENSXCOG00000020227	blm	57	58.072	Xiphophorus_couchianus
ENSPCAG00000008960	BLM	60	59.811	ENSXMAG00000002951	blm	60	59.929	Xiphophorus_maculatus