EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000009032 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 52400 bases
Position: chrGeneScaffold_804:30520-82919
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008527	Rif1_N	PF12231.8	1e-29	1	2
ENSPCAP00000008527	Rif1_N	PF12231.8	1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009133	RIF1-201	7383	-	ENSPCAP00000008527	2460 (aa)	-	UPI00018B0BAA

Gene Model

Click here to download ENSPCAG00000009032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009032	RIF1	83	88.119	ENSG00000080345	RIF1	83	88.119	Homo_sapiens
ENSPCAG00000009032	RIF1	83	84.848	ENSAMEG00000008461	RIF1	83	84.848	Ailuropoda_melanoleuca
ENSPCAG00000009032	RIF1	64	64.651	ENSAPLG00000007092	RIF1	71	64.651	Anas_platyrhynchos
ENSPCAG00000009032	RIF1	55	64.516	ENSACAG00000003714	RIF1	58	64.186	Anolis_carolinensis
ENSPCAG00000009032	RIF1	83	86.139	ENSANAG00000024840	RIF1	83	86.139	Aotus_nancymaae
ENSPCAG00000009032	RIF1	76	86.408	ENSBTAG00000021020	RIF1	81	88.776	Bos_taurus
ENSPCAG00000009032	RIF1	83	84.158	ENSCJAG00000003138	RIF1	83	84.158	Callithrix_jacchus
ENSPCAG00000009032	RIF1	83	83.333	ENSCAFG00000005670	RIF1	80	83.333	Canis_familiaris
ENSPCAG00000009032	RIF1	83	83.333	ENSCAFG00020016401	RIF1	82	83.333	Canis_lupus_dingo
ENSPCAG00000009032	RIF1	83	78.788	ENSCHIG00000020327	RIF1	83	78.788	Capra_hircus
ENSPCAG00000009032	RIF1	77	84.848	ENSTSYG00000008861	RIF1	79	84.848	Carlito_syrichta
ENSPCAG00000009032	RIF1	53	97.778	ENSCAPG00000008957	RIF1	68	97.778	Cavia_aperea
ENSPCAG00000009032	RIF1	83	83.495	ENSCPOG00000037898	RIF1	82	83.495	Cavia_porcellus
ENSPCAG00000009032	RIF1	83	86.139	ENSCCAG00000024760	RIF1	82	86.139	Cebus_capucinus
ENSPCAG00000009032	RIF1	83	89.109	ENSCATG00000033353	RIF1	83	89.109	Cercocebus_atys
ENSPCAG00000009032	RIF1	79	86.408	ENSCLAG00000001517	RIF1	82	86.408	Chinchilla_lanigera
ENSPCAG00000009032	RIF1	83	89.109	ENSCSAG00000016089	RIF1	83	89.109	Chlorocebus_sabaeus
ENSPCAG00000009032	RIF1	78	73.043	ENSCHOG00000007187	RIF1	78	73.043	Choloepus_hoffmanni
ENSPCAG00000009032	RIF1	66	77.215	ENSCPBG00000025885	RIF1	73	77.215	Chrysemys_picta_bellii
ENSPCAG00000009032	RIF1	83	89.109	ENSCANG00000028962	RIF1	83	89.109	Colobus_angolensis_palliatus
ENSPCAG00000009032	RIF1	83	72.727	ENSCGRG00001024589	Rif1	82	72.727	Cricetulus_griseus_chok1gshd
ENSPCAG00000009032	RIF1	79	78.641	ENSCGRG00000010713	Rif1	80	78.641	Cricetulus_griseus_crigri
ENSPCAG00000009032	RIF1	82	85.294	ENSDNOG00000011194	RIF1	80	85.294	Dasypus_novemcinctus
ENSPCAG00000009032	RIF1	77	72.000	ENSETEG00000012421	RIF1	75	78.788	Echinops_telfairi
ENSPCAG00000009032	RIF1	83	82.353	ENSEASG00005023434	RIF1	83	82.353	Equus_asinus_asinus
ENSPCAG00000009032	RIF1	83	84.314	ENSECAG00000012679	RIF1	86	84.314	Equus_caballus
ENSPCAG00000009032	RIF1	83	83.495	ENSFCAG00000029742	RIF1	83	83.495	Felis_catus
ENSPCAG00000009032	RIF1	58	67.424	ENSFALG00000013874	RIF1	69	67.424	Ficedula_albicollis
ENSPCAG00000009032	RIF1	79	80.583	ENSFDAG00000006538	RIF1	78	80.583	Fukomys_damarensis
ENSPCAG00000009032	RIF1	58	68.421	ENSGALG00000012484	RIF1	68	68.421	Gallus_gallus
ENSPCAG00000009032	RIF1	62	78.947	ENSGAGG00000012595	RIF1	71	78.947	Gopherus_agassizii
ENSPCAG00000009032	RIF1	77	88.119	ENSGGOG00000040178	RIF1	82	88.119	Gorilla_gorilla
ENSPCAG00000009032	RIF1	77	82.524	ENSHGLG00100009807	RIF1	82	82.524	Heterocephalus_glaber_male
ENSPCAG00000009032	RIF1	82	82.979	ENSSTOG00000020712	RIF1	82	82.979	Ictidomys_tridecemlineatus
ENSPCAG00000009032	RIF1	80	80.583	ENSJJAG00000023000	Rif1	81	80.583	Jaculus_jaculus
ENSPCAG00000009032	RIF1	52	63.725	ENSLACG00000005425	RIF1	72	63.725	Latimeria_chalumnae
ENSPCAG00000009032	RIF1	60	60.825	ENSLOCG00000002657	rif1	58	60.825	Lepisosteus_oculatus
ENSPCAG00000009032	RIF1	80	91.176	ENSLAFG00000009796	RIF1	80	91.176	Loxodonta_africana
ENSPCAG00000009032	RIF1	83	89.109	ENSMFAG00000032233	RIF1	83	89.109	Macaca_fascicularis
ENSPCAG00000009032	RIF1	83	89.109	ENSMMUG00000008611	RIF1	83	89.109	Macaca_mulatta
ENSPCAG00000009032	RIF1	83	89.109	ENSMNEG00000031616	RIF1	83	89.109	Macaca_nemestrina
ENSPCAG00000009032	RIF1	83	89.109	ENSMLEG00000042945	RIF1	83	89.109	Mandrillus_leucophaeus
ENSPCAG00000009032	RIF1	62	65.116	ENSMGAG00000012732	RIF1	67	65.116	Meleagris_gallopavo
ENSPCAG00000009032	RIF1	83	78.641	ENSMAUG00000013158	Rif1	86	78.641	Mesocricetus_auratus
ENSPCAG00000009032	RIF1	83	86.275	ENSMICG00000046127	RIF1	83	86.275	Microcebus_murinus
ENSPCAG00000009032	RIF1	83	77.670	ENSMOCG00000009381	Rif1	82	77.670	Microtus_ochrogaster
ENSPCAG00000009032	RIF1	81	74.757	ENSMODG00000003703	RIF1	81	74.757	Monodelphis_domestica
ENSPCAG00000009032	RIF1	83	79.612	MGP_CAROLIEiJ_G0023555	Rif1	82	79.612	Mus_caroli
ENSPCAG00000009032	RIF1	83	79.612	ENSMUSG00000036202	Rif1	83	79.612	Mus_musculus
ENSPCAG00000009032	RIF1	83	78.431	MGP_PahariEiJ_G0025006	Rif1	84	78.431	Mus_pahari
ENSPCAG00000009032	RIF1	83	78.641	MGP_SPRETEiJ_G0024476	Rif1	82	78.641	Mus_spretus
ENSPCAG00000009032	RIF1	83	83.495	ENSMPUG00000000371	RIF1	83	83.495	Mustela_putorius_furo
ENSPCAG00000009032	RIF1	72	95.652	ENSMLUG00000003376	RIF1	80	95.652	Myotis_lucifugus
ENSPCAG00000009032	RIF1	83	77.670	ENSNGAG00000009268	Rif1	82	77.670	Nannospalax_galili
ENSPCAG00000009032	RIF1	79	87.129	ENSNLEG00000010955	RIF1	78	87.129	Nomascus_leucogenys
ENSPCAG00000009032	RIF1	56	97.826	ENSMEUG00000007601	-	62	97.826	Notamacropus_eugenii
ENSPCAG00000009032	RIF1	83	81.818	ENSODEG00000003950	RIF1	82	81.818	Octodon_degus
ENSPCAG00000009032	RIF1	55	69.903	ENSOANG00000006078	-	71	69.903	Ornithorhynchus_anatinus
ENSPCAG00000009032	RIF1	83	80.392	ENSOCUG00000017435	RIF1	83	80.392	Oryctolagus_cuniculus
ENSPCAG00000009032	RIF1	83	81.373	ENSOGAG00000006141	RIF1	83	81.373	Otolemur_garnettii
ENSPCAG00000009032	RIF1	83	86.275	ENSOARG00000008930	RIF1	80	86.275	Ovis_aries
ENSPCAG00000009032	RIF1	83	88.119	ENSPPAG00000023754	RIF1	83	88.119	Pan_paniscus
ENSPCAG00000009032	RIF1	83	83.495	ENSPPRG00000003618	RIF1	83	83.495	Panthera_pardus
ENSPCAG00000009032	RIF1	83	83.495	ENSPTIG00000020652	RIF1	83	83.495	Panthera_tigris_altaica
ENSPCAG00000009032	RIF1	83	88.119	ENSPTRG00000012534	RIF1	83	88.119	Pan_troglodytes
ENSPCAG00000009032	RIF1	83	89.109	ENSPANG00000008525	RIF1	83	89.109	Papio_anubis
ENSPCAG00000009032	RIF1	79	81.553	ENSPEMG00000000446	Rif1	79	81.553	Peromyscus_maniculatus_bairdii
ENSPCAG00000009032	RIF1	81	76.699	ENSPCIG00000009185	RIF1	81	76.699	Phascolarctos_cinereus
ENSPCAG00000009032	RIF1	83	87.129	ENSPPYG00000012846	RIF1	83	87.129	Pongo_abelii
ENSPCAG00000009032	RIF1	83	83.333	ENSPCOG00000027888	RIF1	83	83.333	Propithecus_coquereli
ENSPCAG00000009032	RIF1	76	81.818	ENSPVAG00000014276	RIF1	78	81.818	Pteropus_vampyrus
ENSPCAG00000009032	RIF1	83	80.583	ENSRNOG00000054901	Rif1	83	80.583	Rattus_norvegicus
ENSPCAG00000009032	RIF1	83	89.109	ENSRBIG00000003704	RIF1	82	89.109	Rhinopithecus_bieti
ENSPCAG00000009032	RIF1	83	89.109	ENSRROG00000028206	RIF1	83	89.109	Rhinopithecus_roxellana
ENSPCAG00000009032	RIF1	77	85.149	ENSSBOG00000029530	RIF1	80	85.149	Saimiri_boliviensis_boliviensis
ENSPCAG00000009032	RIF1	81	72.816	ENSSHAG00000018552	RIF1	81	72.816	Sarcophilus_harrisii
ENSPCAG00000009032	RIF1	50	79.932	ENSSARG00000007161	-	50	79.932	Sorex_araneus
ENSPCAG00000009032	RIF1	83	84.314	ENSSSCG00000016395	RIF1	80	87.879	Sus_scrofa
ENSPCAG00000009032	RIF1	60	93.333	ENSTBEG00000016082	RIF1	59	93.333	Tupaia_belangeri
ENSPCAG00000009032	RIF1	83	82.524	ENSTTRG00000011190	RIF1	83	82.524	Tursiops_truncatus
ENSPCAG00000009032	RIF1	72	95.652	ENSUAMG00000026385	RIF1	80	95.652	Ursus_americanus
ENSPCAG00000009032	RIF1	82	88.298	ENSUMAG00000000337	RIF1	82	88.298	Ursus_maritimus
ENSPCAG00000009032	RIF1	81	85.437	ENSVPAG00000002162	RIF1	81	85.437	Vicugna_pacos
ENSPCAG00000009032	RIF1	83	83.333	ENSVVUG00000011293	RIF1	83	84.091	Vulpes_vulpes