EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000009106 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 6365 bases
Position: chrscaffold_13978:26183-32547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	1	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	2	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	3	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	4	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	5	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	6	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	7	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	8	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	9	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	10	11
ENSPCAP00000008489	zf-C2H2	PF00096.26	3e-59	11	11
ENSPCAP00000008489	zf-met	PF12874.7	0.0002	1	2
ENSPCAP00000008489	zf-met	PF12874.7	0.0002	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009094	-	1497	-	ENSPCAP00000008489	499 (aa)	-	UPI00018AE236

Gene Model

Click here to download ENSPCAG00000009106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000009106	-	78	56.000	ENSPCAG00000016939	ZNF2	60	56.000
ENSPCAG00000009106	-	91	39.706	ENSPCAG00000001788	-	90	39.706
ENSPCAG00000009106	-	78	32.107	ENSPCAG00000016959	ZNF526	80	32.024
ENSPCAG00000009106	-	88	44.615	ENSPCAG00000000195	ZKSCAN4	59	45.200
ENSPCAG00000009106	-	99	44.153	ENSPCAG00000012543	ZNF234	99	44.153
ENSPCAG00000009106	-	84	47.181	ENSPCAG00000007476	-	99	47.801
ENSPCAG00000009106	-	79	38.312	ENSPCAG00000011671	PRDM5	80	38.312
ENSPCAG00000009106	-	81	54.088	ENSPCAG00000005203	ZNF235	66	54.088
ENSPCAG00000009106	-	74	41.724	ENSPCAG00000007544	GZF1	50	41.869
ENSPCAG00000009106	-	98	44.713	ENSPCAG00000000862	-	86	44.713
ENSPCAG00000009106	-	98	50.446	ENSPCAG00000016123	-	77	50.446
ENSPCAG00000009106	-	92	45.253	ENSPCAG00000001613	-	99	45.253
ENSPCAG00000009106	-	88	41.497	ENSPCAG00000007561	ZFP1	99	41.497
ENSPCAG00000009106	-	77	43.750	ENSPCAG00000008132	ZNF236	51	41.441
ENSPCAG00000009106	-	92	51.948	ENSPCAG00000015262	ZFP69B	98	51.948
ENSPCAG00000009106	-	95	54.577	ENSPCAG00000000878	ZNF582	90	54.577
ENSPCAG00000009106	-	86	47.091	ENSPCAG00000005270	-	98	47.091
ENSPCAG00000009106	-	87	48.710	ENSPCAG00000004217	-	89	48.710
ENSPCAG00000009106	-	69	47.170	ENSPCAG00000011934	SNAI1	92	47.170
ENSPCAG00000009106	-	73	48.020	ENSPCAG00000008589	ZNF628	79	48.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009106	-	73	56.308	ENSAMXG00000000353	-	93	56.308	Astyanax_mexicanus
ENSPCAG00000009106	-	78	50.645	ENSAMXG00000044028	-	98	50.645	Astyanax_mexicanus
ENSPCAG00000009106	-	85	54.475	ENSAMXG00000029783	-	94	54.475	Astyanax_mexicanus
ENSPCAG00000009106	-	85	48.221	ENSAMXG00000034096	-	91	48.221	Astyanax_mexicanus
ENSPCAG00000009106	-	74	50.935	ENSAMXG00000043019	-	98	50.935	Astyanax_mexicanus
ENSPCAG00000009106	-	85	44.643	ENSBTAG00000014593	-	82	45.087	Bos_taurus
ENSPCAG00000009106	-	73	53.069	ENSBTAG00000040358	-	100	53.069	Bos_taurus
ENSPCAG00000009106	-	78	51.320	ENSCSAG00000000471	-	97	51.320	Chlorocebus_sabaeus
ENSPCAG00000009106	-	98	53.979	ENSCPBG00000002430	-	93	53.979	Chrysemys_picta_bellii
ENSPCAG00000009106	-	81	45.588	ENSCPBG00000009609	-	81	45.588	Chrysemys_picta_bellii
ENSPCAG00000009106	-	92	51.672	ENSDNOG00000042588	-	99	53.806	Dasypus_novemcinctus
ENSPCAG00000009106	-	92	32.461	ENSDNOG00000047529	-	99	34.831	Dasypus_novemcinctus
ENSPCAG00000009106	-	79	51.004	ENSEBUG00000013221	-	84	51.004	Eptatretus_burgeri
ENSPCAG00000009106	-	98	43.253	ENSEBUG00000016969	-	99	43.253	Eptatretus_burgeri
ENSPCAG00000009106	-	76	45.066	ENSEBUG00000016164	-	68	44.918	Eptatretus_burgeri
ENSPCAG00000009106	-	85	44.000	ENSELUG00000019008	-	87	44.000	Esox_lucius
ENSPCAG00000009106	-	80	54.225	ENSFCAG00000043966	-	98	54.225	Felis_catus
ENSPCAG00000009106	-	74	47.273	ENSGAFG00000013048	-	75	47.273	Gambusia_affinis
ENSPCAG00000009106	-	79	54.967	ENSGAFG00000021131	-	83	54.967	Gambusia_affinis
ENSPCAG00000009106	-	78	51.895	ENSGGOG00000042802	-	98	51.895	Gorilla_gorilla
ENSPCAG00000009106	-	98	44.220	ENSHCOG00000014713	-	99	45.013	Hippocampus_comes
ENSPCAG00000009106	-	78	46.726	ENSHCOG00000019512	-	90	46.726	Hippocampus_comes
ENSPCAG00000009106	-	78	50.693	ENSMFAG00000008648	-	97	51.906	Macaca_fascicularis
ENSPCAG00000009106	-	78	50.693	ENSMNEG00000001556	-	97	51.906	Macaca_nemestrina
ENSPCAG00000009106	-	78	52.199	ENSMLEG00000007035	-	97	52.199	Mandrillus_leucophaeus
ENSPCAG00000009106	-	98	46.429	ENSMAUG00000015263	-	86	46.429	Mesocricetus_auratus
ENSPCAG00000009106	-	98	44.893	ENSMOCG00000003394	-	95	45.428	Microtus_ochrogaster
ENSPCAG00000009106	-	93	49.254	ENSMODG00000028916	-	89	49.254	Monodelphis_domestica
ENSPCAG00000009106	-	98	45.133	ENSMPUG00000006562	-	92	45.133	Mustela_putorius_furo
ENSPCAG00000009106	-	79	52.910	ENSNBRG00000010194	-	66	50.000	Neolamprologus_brichardi
ENSPCAG00000009106	-	77	51.676	ENSNLEG00000018988	-	98	51.676	Nomascus_leucogenys
ENSPCAG00000009106	-	93	50.148	ENSMEUG00000012153	-	98	50.148	Notamacropus_eugenii
ENSPCAG00000009106	-	84	46.859	ENSMEUG00000006978	-	98	46.859	Notamacropus_eugenii
ENSPCAG00000009106	-	89	43.548	ENSOGAG00000024538	-	69	43.548	Otolemur_garnettii
ENSPCAG00000009106	-	78	51.895	ENSPPAG00000014496	-	98	51.895	Pan_paniscus
ENSPCAG00000009106	-	78	52.199	ENSPANG00000030207	-	97	52.199	Papio_anubis
ENSPCAG00000009106	-	76	48.254	ENSPSIG00000009650	-	70	48.254	Pelodiscus_sinensis
ENSPCAG00000009106	-	95	40.476	ENSPSIG00000002565	-	92	40.476	Pelodiscus_sinensis
ENSPCAG00000009106	-	89	54.045	ENSPSIG00000010405	-	99	54.045	Pelodiscus_sinensis
ENSPCAG00000009106	-	99	45.355	ENSPEMG00000010242	-	91	46.292	Peromyscus_maniculatus_bairdii
ENSPCAG00000009106	-	72	47.273	ENSPLAG00000020710	-	86	47.273	Poecilia_latipinna
ENSPCAG00000009106	-	75	47.756	ENSPLAG00000010389	-	79	40.102	Poecilia_latipinna
ENSPCAG00000009106	-	87	54.000	ENSPLAG00000021062	-	97	46.392	Poecilia_latipinna
ENSPCAG00000009106	-	85	37.817	ENSPNYG00000024243	-	92	39.589	Pundamilia_nyererei
ENSPCAG00000009106	-	75	52.104	ENSPNAG00000018644	-	95	52.104	Pygocentrus_nattereri
ENSPCAG00000009106	-	93	41.851	ENSSHAG00000001415	-	98	41.851	Sarcophilus_harrisii
ENSPCAG00000009106	-	81	50.644	ENSSDUG00000009534	-	67	49.326	Seriola_dumerili
ENSPCAG00000009106	-	93	47.714	ENSSLDG00000013760	-	98	50.570	Seriola_lalandi_dorsalis
ENSPCAG00000009106	-	79	47.475	ENSSPUG00000007147	-	97	47.475	Sphenodon_punctatus
ENSPCAG00000009106	-	84	51.148	ENSTRUG00000006896	-	88	50.316	Takifugu_rubripes
ENSPCAG00000009106	-	87	51.976	ENSVPAG00000011867	-	91	51.976	Vicugna_pacos
ENSPCAG00000009106	-	82	41.549	ENSXCOG00000009794	-	80	41.549	Xiphophorus_couchianus