EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000009135 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 5857 bases
Position: chrGeneScaffold_372:69596-75452
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008512	EXOSC1	PF10447.9	2.2e-15	1	1
ENSPCAP00000008512	ECR1_N	PF14382.6	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009117	EXOSC1-201	588	-	ENSPCAP00000008512	195 (aa)	-	UPI00018B0984

Gene Model

Click here to download ENSPCAG00000009135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009135	EXOSC1	100	96.410	ENSG00000171311	EXOSC1	100	96.410	Homo_sapiens
ENSPCAG00000009135	EXOSC1	98	79.058	ENSAPOG00000007822	exosc1	98	79.058	Acanthochromis_polyacanthus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSAMEG00000000129	EXOSC1	100	97.949	Ailuropoda_melanoleuca
ENSPCAG00000009135	EXOSC1	96	78.723	ENSACIG00000018956	exosc1	92	78.723	Amphilophus_citrinellus
ENSPCAG00000009135	EXOSC1	98	79.058	ENSAOCG00000010699	exosc1	98	79.058	Amphiprion_ocellaris
ENSPCAG00000009135	EXOSC1	91	70.225	ENSAPEG00000012690	exosc1	96	70.225	Amphiprion_percula
ENSPCAG00000009135	EXOSC1	98	78.534	ENSATEG00000018683	exosc1	98	78.534	Anabas_testudineus
ENSPCAG00000009135	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSPCAG00000009135	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSPCAG00000009135	EXOSC1	98	79.058	ENSACLG00000021243	exosc1	98	79.058	Astatotilapia_calliptera
ENSPCAG00000009135	EXOSC1	98	80.628	ENSAMXG00000011116	exosc1	98	80.628	Astyanax_mexicanus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSBTAG00000012699	EXOSC1	100	97.436	Bos_taurus
ENSPCAG00000009135	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCAFG00000009068	EXOSC1	94	97.436	Canis_familiaris
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCAFG00020006002	EXOSC1	94	97.436	Canis_lupus_dingo
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCHIG00000015253	EXOSC1	100	97.436	Capra_hircus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCPOG00000001173	EXOSC1	100	97.436	Cavia_porcellus
ENSPCAG00000009135	EXOSC1	100	55.838	ENSCCAG00000023986	EXOSC1	100	55.838	Cebus_capucinus
ENSPCAG00000009135	EXOSC1	100	96.410	ENSCATG00000034114	EXOSC1	100	96.410	Cercocebus_atys
ENSPCAG00000009135	EXOSC1	100	97.949	ENSCLAG00000002463	EXOSC1	100	97.949	Chinchilla_lanigera
ENSPCAG00000009135	EXOSC1	100	95.897	ENSCSAG00000005870	EXOSC1	100	95.897	Chlorocebus_sabaeus
ENSPCAG00000009135	EXOSC1	96	83.422	ENSCHOG00000006477	EXOSC1	100	83.422	Choloepus_hoffmanni
ENSPCAG00000009135	EXOSC1	54	80.189	ENSCPBG00000011949	EXOSC1	88	80.189	Chrysemys_picta_bellii
ENSPCAG00000009135	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSPCAG00000009135	EXOSC1	95	56.684	ENSCSAVG00000010865	-	95	56.684	Ciona_savignyi
ENSPCAG00000009135	EXOSC1	100	96.410	ENSCANG00000034159	EXOSC1	100	96.410	Colobus_angolensis_palliatus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSPCAG00000009135	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSPCAG00000009135	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSPCAG00000009135	EXOSC1	98	75.393	ENSCVAG00000016748	exosc1	98	75.393	Cyprinodon_variegatus
ENSPCAG00000009135	EXOSC1	98	79.581	ENSDARG00000059841	exosc1	98	79.581	Danio_rerio
ENSPCAG00000009135	EXOSC1	75	97.297	ENSDNOG00000007983	EXOSC1	100	97.297	Dasypus_novemcinctus
ENSPCAG00000009135	EXOSC1	100	96.923	ENSDORG00000016528	Exosc1	100	96.923	Dipodomys_ordii
ENSPCAG00000009135	EXOSC1	94	49.206	FBgn0032346	Csl4	92	49.206	Drosophila_melanogaster
ENSPCAG00000009135	EXOSC1	100	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSPCAG00000009135	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSPCAG00000009135	EXOSC1	100	87.692	ENSEASG00005008684	EXOSC1	100	87.692	Equus_asinus_asinus
ENSPCAG00000009135	EXOSC1	61	77.311	ENSECAG00000010621	EXOSC1	71	77.311	Equus_caballus
ENSPCAG00000009135	EXOSC1	100	96.923	ENSEEUG00000005647	EXOSC1	100	96.923	Erinaceus_europaeus
ENSPCAG00000009135	EXOSC1	94	79.891	ENSELUG00000017369	exosc1	81	79.891	Esox_lucius
ENSPCAG00000009135	EXOSC1	100	97.949	ENSFCAG00000040563	EXOSC1	94	97.949	Felis_catus
ENSPCAG00000009135	EXOSC1	100	83.590	ENSFALG00000008450	EXOSC1	100	83.590	Ficedula_albicollis
ENSPCAG00000009135	EXOSC1	100	97.949	ENSFDAG00000000846	EXOSC1	100	97.949	Fukomys_damarensis
ENSPCAG00000009135	EXOSC1	98	75.393	ENSFHEG00000009154	exosc1	98	75.393	Fundulus_heteroclitus
ENSPCAG00000009135	EXOSC1	98	79.058	ENSGMOG00000008993	exosc1	98	79.058	Gadus_morhua
ENSPCAG00000009135	EXOSC1	100	72.308	ENSGALG00000039917	EXOSC1	100	87.671	Gallus_gallus
ENSPCAG00000009135	EXOSC1	98	75.393	ENSGAFG00000010265	exosc1	94	75.393	Gambusia_affinis
ENSPCAG00000009135	EXOSC1	98	79.058	ENSGACG00000018936	exosc1	98	79.058	Gasterosteus_aculeatus
ENSPCAG00000009135	EXOSC1	100	84.103	ENSGAGG00000019192	EXOSC1	100	84.103	Gopherus_agassizii
ENSPCAG00000009135	EXOSC1	100	84.103	ENSGGOG00000003099	EXOSC1	100	84.103	Gorilla_gorilla
ENSPCAG00000009135	EXOSC1	98	79.058	ENSHBUG00000017857	exosc1	98	79.058	Haplochromis_burtoni
ENSPCAG00000009135	EXOSC1	100	97.436	ENSHGLG00000016927	EXOSC1	100	97.436	Heterocephalus_glaber_female
ENSPCAG00000009135	EXOSC1	100	97.436	ENSHGLG00100012208	EXOSC1	100	97.436	Heterocephalus_glaber_male
ENSPCAG00000009135	EXOSC1	98	78.010	ENSHCOG00000019882	exosc1	98	78.010	Hippocampus_comes
ENSPCAG00000009135	EXOSC1	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSPCAG00000009135	EXOSC1	63	81.967	ENSSTOG00000029860	-	93	81.967	Ictidomys_tridecemlineatus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSSTOG00000006615	EXOSC1	100	97.949	Ictidomys_tridecemlineatus
ENSPCAG00000009135	EXOSC1	100	96.923	ENSJJAG00000013311	Exosc1	100	96.923	Jaculus_jaculus
ENSPCAG00000009135	EXOSC1	98	77.083	ENSKMAG00000001202	exosc1	81	77.083	Kryptolebias_marmoratus
ENSPCAG00000009135	EXOSC1	98	78.534	ENSLBEG00000011448	exosc1	98	78.534	Labrus_bergylta
ENSPCAG00000009135	EXOSC1	98	59.091	ENSLOCG00000003776	exosc1	99	59.091	Lepisosteus_oculatus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSPCAG00000009135	EXOSC1	100	96.410	ENSMFAG00000001493	EXOSC1	100	96.410	Macaca_fascicularis
ENSPCAG00000009135	EXOSC1	100	96.410	ENSMMUG00000020028	EXOSC1	100	89.447	Macaca_mulatta
ENSPCAG00000009135	EXOSC1	100	96.410	ENSMNEG00000029816	EXOSC1	100	96.410	Macaca_nemestrina
ENSPCAG00000009135	EXOSC1	100	90.769	ENSMLEG00000027643	EXOSC1	100	90.769	Mandrillus_leucophaeus
ENSPCAG00000009135	EXOSC1	98	79.581	ENSMAMG00000012200	exosc1	98	79.581	Mastacembelus_armatus
ENSPCAG00000009135	EXOSC1	98	79.058	ENSMZEG00005007042	exosc1	98	79.058	Maylandia_zebra
ENSPCAG00000009135	EXOSC1	100	84.615	ENSMAUG00000020462	-	100	84.615	Mesocricetus_auratus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSMICG00000007664	EXOSC1	92	97.436	Microcebus_murinus
ENSPCAG00000009135	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSPCAG00000009135	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSPCAG00000009135	EXOSC1	99	59.278	ENSMMOG00000021403	exosc1	99	59.278	Mola_mola
ENSPCAG00000009135	EXOSC1	100	91.837	ENSMODG00000004213	EXOSC1	100	91.837	Monodelphis_domestica
ENSPCAG00000009135	EXOSC1	94	79.891	ENSMALG00000007061	exosc1	92	79.891	Monopterus_albus
ENSPCAG00000009135	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSPCAG00000009135	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSPCAG00000009135	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSPCAG00000009135	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSMPUG00000017044	EXOSC1	100	97.949	Mustela_putorius_furo
ENSPCAG00000009135	EXOSC1	100	97.436	ENSMLUG00000009228	EXOSC1	100	97.436	Myotis_lucifugus
ENSPCAG00000009135	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSPCAG00000009135	EXOSC1	98	59.686	ENSNBRG00000024007	exosc1	97	59.686	Neolamprologus_brichardi
ENSPCAG00000009135	EXOSC1	100	95.897	ENSNLEG00000013872	EXOSC1	100	95.897	Nomascus_leucogenys
ENSPCAG00000009135	EXOSC1	59	89.565	ENSMEUG00000002246	EXOSC1	100	89.565	Notamacropus_eugenii
ENSPCAG00000009135	EXOSC1	100	95.897	ENSOPRG00000005065	EXOSC1	100	95.897	Ochotona_princeps
ENSPCAG00000009135	EXOSC1	100	97.436	ENSODEG00000016709	EXOSC1	100	97.436	Octodon_degus
ENSPCAG00000009135	EXOSC1	98	79.058	ENSONIG00000017683	exosc1	98	79.058	Oreochromis_niloticus
ENSPCAG00000009135	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSPCAG00000009135	EXOSC1	100	96.429	ENSOCUG00000011898	-	100	96.429	Oryctolagus_cuniculus
ENSPCAG00000009135	EXOSC1	100	91.282	ENSOCUG00000026461	-	100	91.282	Oryctolagus_cuniculus
ENSPCAG00000009135	EXOSC1	98	77.604	ENSORLG00000011595	exosc1	98	77.604	Oryzias_latipes
ENSPCAG00000009135	EXOSC1	98	77.604	ENSORLG00020005831	exosc1	98	77.604	Oryzias_latipes_hni
ENSPCAG00000009135	EXOSC1	98	77.604	ENSORLG00015004317	exosc1	98	77.604	Oryzias_latipes_hsok
ENSPCAG00000009135	EXOSC1	98	62.304	ENSOMEG00000013907	exosc1	98	62.304	Oryzias_melastigma
ENSPCAG00000009135	EXOSC1	100	96.923	ENSOGAG00000016259	EXOSC1	100	96.923	Otolemur_garnettii
ENSPCAG00000009135	EXOSC1	100	96.923	ENSOARG00000010136	EXOSC1	100	96.923	Ovis_aries
ENSPCAG00000009135	EXOSC1	100	90.355	ENSPPAG00000039842	EXOSC1	100	90.355	Pan_paniscus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSPPRG00000023366	EXOSC1	100	97.949	Panthera_pardus
ENSPCAG00000009135	EXOSC1	100	97.949	ENSPTIG00000017701	EXOSC1	100	97.949	Panthera_tigris_altaica
ENSPCAG00000009135	EXOSC1	100	96.410	ENSPTRG00000002808	EXOSC1	100	96.410	Pan_troglodytes
ENSPCAG00000009135	EXOSC1	100	96.410	ENSPANG00000021324	EXOSC1	100	96.410	Papio_anubis
ENSPCAG00000009135	EXOSC1	98	80.105	ENSPKIG00000016037	exosc1	98	80.105	Paramormyrops_kingsleyae
ENSPCAG00000009135	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSPCAG00000009135	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSPCAG00000009135	EXOSC1	95	70.588	ENSPMAG00000000195	exosc1	95	70.588	Petromyzon_marinus
ENSPCAG00000009135	EXOSC1	100	92.821	ENSPCIG00000002210	EXOSC1	99	92.821	Phascolarctos_cinereus
ENSPCAG00000009135	EXOSC1	98	74.869	ENSPFOG00000006755	exosc1	94	74.869	Poecilia_formosa
ENSPCAG00000009135	EXOSC1	98	74.869	ENSPLAG00000005880	exosc1	98	74.869	Poecilia_latipinna
ENSPCAG00000009135	EXOSC1	98	74.869	ENSPMEG00000015598	exosc1	94	74.869	Poecilia_mexicana
ENSPCAG00000009135	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSPCAG00000009135	EXOSC1	100	95.897	ENSPPYG00000002531	EXOSC1	100	95.897	Pongo_abelii
ENSPCAG00000009135	EXOSC1	100	91.282	ENSPCOG00000027539	EXOSC1	100	91.282	Propithecus_coquereli
ENSPCAG00000009135	EXOSC1	100	97.949	ENSPVAG00000003372	EXOSC1	100	97.949	Pteropus_vampyrus
ENSPCAG00000009135	EXOSC1	98	79.058	ENSPNYG00000021745	exosc1	98	79.058	Pundamilia_nyererei
ENSPCAG00000009135	EXOSC1	98	79.581	ENSPNAG00000001944	exosc1	98	79.581	Pygocentrus_nattereri
ENSPCAG00000009135	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSPCAG00000009135	EXOSC1	100	96.410	ENSRBIG00000035618	EXOSC1	100	96.410	Rhinopithecus_bieti
ENSPCAG00000009135	EXOSC1	100	96.410	ENSRROG00000032589	EXOSC1	92	96.410	Rhinopithecus_roxellana
ENSPCAG00000009135	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSPCAG00000009135	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSPCAG00000009135	EXOSC1	97	76.842	ENSSFOG00015016289	-	98	76.842	Scleropages_formosus
ENSPCAG00000009135	EXOSC1	98	81.675	ENSSFOG00015009069	exosc1	98	81.675	Scleropages_formosus
ENSPCAG00000009135	EXOSC1	98	79.581	ENSSMAG00000003721	exosc1	98	79.581	Scophthalmus_maximus
ENSPCAG00000009135	EXOSC1	98	79.581	ENSSDUG00000002993	exosc1	98	79.581	Seriola_dumerili
ENSPCAG00000009135	EXOSC1	98	79.581	ENSSLDG00000025181	exosc1	98	79.581	Seriola_lalandi_dorsalis
ENSPCAG00000009135	EXOSC1	100	83.590	ENSSARG00000000162	EXOSC1	100	83.590	Sorex_araneus
ENSPCAG00000009135	EXOSC1	99	81.959	ENSSPUG00000012263	EXOSC1	99	81.959	Sphenodon_punctatus
ENSPCAG00000009135	EXOSC1	98	70.681	ENSSPAG00000016792	exosc1	82	70.681	Stegastes_partitus
ENSPCAG00000009135	EXOSC1	100	96.923	ENSSSCG00000010518	EXOSC1	91	96.923	Sus_scrofa
ENSPCAG00000009135	EXOSC1	98	81.771	ENSTGUG00000009692	EXOSC1	99	81.771	Taeniopygia_guttata
ENSPCAG00000009135	EXOSC1	97	73.016	ENSTRUG00000007706	exosc1	98	73.016	Takifugu_rubripes
ENSPCAG00000009135	EXOSC1	97	72.917	ENSTNIG00000014079	exosc1	97	72.917	Tetraodon_nigroviridis
ENSPCAG00000009135	EXOSC1	100	89.231	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSPCAG00000009135	EXOSC1	94	97.283	ENSTTRG00000009887	EXOSC1	100	97.283	Tursiops_truncatus
ENSPCAG00000009135	EXOSC1	100	81.026	ENSUAMG00000010266	EXOSC1	100	81.026	Ursus_americanus
ENSPCAG00000009135	EXOSC1	100	81.026	ENSUMAG00000022002	EXOSC1	100	81.026	Ursus_maritimus
ENSPCAG00000009135	EXOSC1	100	97.436	ENSVVUG00000023192	EXOSC1	63	97.436	Vulpes_vulpes
ENSPCAG00000009135	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSPCAG00000009135	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSPCAG00000009135	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus