EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000009292 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 31242 bases
Position: chrGeneScaffold_2188:77292-108533
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008738	SF3b1	PF08920.10	2.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009363	SF3B1-201	3909	-	ENSPCAP00000008738	1302 (aa)	-	UPI00018B0773

Gene Model

Click here to download ENSPCAG00000009292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009292	SF3B1	100	99.847	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSPCAG00000009292	SF3B1	100	93.470	ENSAPOG00000011894	sf3b1	100	93.470	Acanthochromis_polyacanthus
ENSPCAG00000009292	SF3B1	99	99.769	ENSAMEG00000013809	SF3B1	99	99.769	Ailuropoda_melanoleuca
ENSPCAG00000009292	SF3B1	100	93.064	ENSACIG00000020910	sf3b1	97	92.912	Amphilophus_citrinellus
ENSPCAG00000009292	SF3B1	100	93.470	ENSAOCG00000004478	sf3b1	100	93.470	Amphiprion_ocellaris
ENSPCAG00000009292	SF3B1	100	93.470	ENSAPEG00000012937	sf3b1	100	93.470	Amphiprion_percula
ENSPCAG00000009292	SF3B1	100	93.541	ENSATEG00000020435	sf3b1	100	93.541	Anabas_testudineus
ENSPCAG00000009292	SF3B1	99	99.228	ENSAPLG00000003993	SF3B1	99	99.228	Anas_platyrhynchos
ENSPCAG00000009292	SF3B1	100	98.696	ENSACAG00000009612	SF3B1	100	98.696	Anolis_carolinensis
ENSPCAG00000009292	SF3B1	100	99.847	ENSANAG00000021577	SF3B1	100	99.847	Aotus_nancymaae
ENSPCAG00000009292	SF3B1	100	92.705	ENSACLG00000023470	sf3b1	100	92.553	Astatotilapia_calliptera
ENSPCAG00000009292	SF3B1	100	93.997	ENSAMXG00000002219	sf3b1	100	93.845	Astyanax_mexicanus
ENSPCAG00000009292	SF3B1	100	99.770	ENSBTAG00000008915	SF3B1	100	99.770	Bos_taurus
ENSPCAG00000009292	SF3B1	98	66.290	WBGene00011605	sftb-1	98	66.365	Caenorhabditis_elegans
ENSPCAG00000009292	SF3B1	100	99.847	ENSCJAG00000003902	SF3B1	100	99.847	Callithrix_jacchus
ENSPCAG00000009292	SF3B1	100	99.847	ENSCAFG00000010826	SF3B1	100	99.847	Canis_familiaris
ENSPCAG00000009292	SF3B1	100	99.847	ENSCAFG00020004750	SF3B1	100	99.847	Canis_lupus_dingo
ENSPCAG00000009292	SF3B1	100	99.770	ENSCHIG00000015226	SF3B1	100	99.770	Capra_hircus
ENSPCAG00000009292	SF3B1	100	99.770	ENSTSYG00000009214	SF3B1	100	99.770	Carlito_syrichta
ENSPCAG00000009292	SF3B1	99	99.692	ENSCAPG00000006547	SF3B1	99	99.692	Cavia_aperea
ENSPCAG00000009292	SF3B1	99	99.845	ENSCPOG00000009353	SF3B1	100	99.845	Cavia_porcellus
ENSPCAG00000009292	SF3B1	100	99.847	ENSCCAG00000020506	SF3B1	100	99.847	Cebus_capucinus
ENSPCAG00000009292	SF3B1	100	99.847	ENSCATG00000035735	SF3B1	100	99.847	Cercocebus_atys
ENSPCAG00000009292	SF3B1	99	99.846	ENSCLAG00000014767	SF3B1	99	99.846	Chinchilla_lanigera
ENSPCAG00000009292	SF3B1	100	99.847	ENSCSAG00000011505	SF3B1	100	99.847	Chlorocebus_sabaeus
ENSPCAG00000009292	SF3B1	76	98.462	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSPCAG00000009292	SF3B1	100	99.080	ENSCPBG00000021902	SF3B1	100	99.080	Chrysemys_picta_bellii
ENSPCAG00000009292	SF3B1	69	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSPCAG00000009292	SF3B1	99	79.712	ENSCSAVG00000002559	-	99	79.318	Ciona_savignyi
ENSPCAG00000009292	SF3B1	100	99.847	ENSCANG00000029415	SF3B1	100	99.847	Colobus_angolensis_palliatus
ENSPCAG00000009292	SF3B1	100	99.847	ENSCGRG00001016990	Sf3b1	100	99.847	Cricetulus_griseus_chok1gshd
ENSPCAG00000009292	SF3B1	100	99.847	ENSCGRG00000005301	Sf3b1	100	99.847	Cricetulus_griseus_crigri
ENSPCAG00000009292	SF3B1	100	89.863	ENSCSEG00000003860	sf3b1	100	89.787	Cynoglossus_semilaevis
ENSPCAG00000009292	SF3B1	96	93.518	ENSCVAG00000003680	sf3b1	99	93.518	Cyprinodon_variegatus
ENSPCAG00000009292	SF3B1	100	93.318	ENSDARG00000056138	sf3b1	100	93.242	Danio_rerio
ENSPCAG00000009292	SF3B1	100	99.770	ENSDNOG00000011754	SF3B1	100	99.770	Dasypus_novemcinctus
ENSPCAG00000009292	SF3B1	99	97.143	ENSDORG00000002399	Sf3b1	100	97.143	Dipodomys_ordii
ENSPCAG00000009292	SF3B1	100	76.471	FBgn0031266	Sf3b1	100	76.471	Drosophila_melanogaster
ENSPCAG00000009292	SF3B1	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSPCAG00000009292	SF3B1	99	87.117	ENSEBUG00000004325	sf3b1	100	90.017	Eptatretus_burgeri
ENSPCAG00000009292	SF3B1	100	99.770	ENSEASG00005020159	SF3B1	98	99.770	Equus_asinus_asinus
ENSPCAG00000009292	SF3B1	100	99.770	ENSECAG00000021657	SF3B1	98	99.770	Equus_caballus
ENSPCAG00000009292	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPCAG00000009292	SF3B1	100	92.981	ENSELUG00000005977	sf3b1	98	92.830	Esox_lucius
ENSPCAG00000009292	SF3B1	100	99.847	ENSFCAG00000005038	SF3B1	100	99.847	Felis_catus
ENSPCAG00000009292	SF3B1	99	99.305	ENSFALG00000004281	SF3B1	99	99.305	Ficedula_albicollis
ENSPCAG00000009292	SF3B1	100	99.847	ENSFDAG00000017510	SF3B1	100	99.847	Fukomys_damarensis
ENSPCAG00000009292	SF3B1	100	92.787	ENSFHEG00000014333	sf3b1	100	92.787	Fundulus_heteroclitus
ENSPCAG00000009292	SF3B1	100	93.379	ENSGMOG00000006773	sf3b1	100	93.379	Gadus_morhua
ENSPCAG00000009292	SF3B1	100	99.233	ENSGALG00000008038	SF3B1	100	99.233	Gallus_gallus
ENSPCAG00000009292	SF3B1	100	91.762	ENSGAFG00000000704	sf3b1	99	93.287	Gambusia_affinis
ENSPCAG00000009292	SF3B1	100	93.521	ENSGACG00000008839	sf3b1	100	93.521	Gasterosteus_aculeatus
ENSPCAG00000009292	SF3B1	100	98.401	ENSGAGG00000017478	SF3B1	100	98.401	Gopherus_agassizii
ENSPCAG00000009292	SF3B1	99	93.016	ENSGGOG00000009264	SF3B1	99	94.363	Gorilla_gorilla
ENSPCAG00000009292	SF3B1	99	92.770	ENSHBUG00000007705	sf3b1	99	92.618	Haplochromis_burtoni
ENSPCAG00000009292	SF3B1	99	99.846	ENSHGLG00000008285	-	99	99.846	Heterocephalus_glaber_female
ENSPCAG00000009292	SF3B1	99	97.838	ENSHGLG00100005535	-	99	97.838	Heterocephalus_glaber_male
ENSPCAG00000009292	SF3B1	100	92.825	ENSHCOG00000016775	sf3b1	100	92.674	Hippocampus_comes
ENSPCAG00000009292	SF3B1	100	93.845	ENSIPUG00000013171	sf3b1	100	93.845	Ictalurus_punctatus
ENSPCAG00000009292	SF3B1	100	99.847	ENSSTOG00000011034	SF3B1	100	99.847	Ictidomys_tridecemlineatus
ENSPCAG00000009292	SF3B1	99	99.767	ENSJJAG00000010903	Sf3b1	99	99.767	Jaculus_jaculus
ENSPCAG00000009292	SF3B1	100	92.955	ENSKMAG00000004009	sf3b1	100	92.879	Kryptolebias_marmoratus
ENSPCAG00000009292	SF3B1	100	93.435	ENSLBEG00000022208	sf3b1	100	93.282	Labrus_bergylta
ENSPCAG00000009292	SF3B1	99	92.337	ENSLACG00000014832	SF3B1	99	92.337	Latimeria_chalumnae
ENSPCAG00000009292	SF3B1	100	94.765	ENSLOCG00000003899	sf3b1	100	94.613	Lepisosteus_oculatus
ENSPCAG00000009292	SF3B1	100	99.847	ENSLAFG00000001956	SF3B1	100	99.847	Loxodonta_africana
ENSPCAG00000009292	SF3B1	99	99.846	ENSMMUG00000022430	SF3B1	99	99.846	Macaca_mulatta
ENSPCAG00000009292	SF3B1	100	99.847	ENSMNEG00000042333	SF3B1	100	99.847	Macaca_nemestrina
ENSPCAG00000009292	SF3B1	95	93.317	ENSMLEG00000026141	SF3B1	99	93.866	Mandrillus_leucophaeus
ENSPCAG00000009292	SF3B1	100	93.465	ENSMAMG00000010241	sf3b1	100	93.465	Mastacembelus_armatus
ENSPCAG00000009292	SF3B1	100	92.705	ENSMZEG00005021254	sf3b1	100	92.553	Maylandia_zebra
ENSPCAG00000009292	SF3B1	99	98.610	ENSMGAG00000007017	SF3B1	99	98.610	Meleagris_gallopavo
ENSPCAG00000009292	SF3B1	99	95.598	ENSMAUG00000009071	Sf3b1	99	95.598	Mesocricetus_auratus
ENSPCAG00000009292	SF3B1	100	99.770	ENSMICG00000013879	SF3B1	100	99.770	Microcebus_murinus
ENSPCAG00000009292	SF3B1	99	95.370	ENSMOCG00000000455	Sf3b1	99	95.370	Microtus_ochrogaster
ENSPCAG00000009292	SF3B1	84	93.059	ENSMMOG00000000475	sf3b1	100	93.059	Mola_mola
ENSPCAG00000009292	SF3B1	100	99.156	ENSMODG00000012275	SF3B1	100	99.156	Monodelphis_domestica
ENSPCAG00000009292	SF3B1	100	93.389	ENSMALG00000017211	sf3b1	100	93.389	Monopterus_albus
ENSPCAG00000009292	SF3B1	100	99.847	MGP_CAROLIEiJ_G0014141	Sf3b1	100	99.847	Mus_caroli
ENSPCAG00000009292	SF3B1	100	99.847	ENSMUSG00000025982	Sf3b1	100	99.847	Mus_musculus
ENSPCAG00000009292	SF3B1	100	99.847	MGP_SPRETEiJ_G0014947	Sf3b1	100	99.847	Mus_spretus
ENSPCAG00000009292	SF3B1	100	99.847	ENSMPUG00000007799	SF3B1	100	99.847	Mustela_putorius_furo
ENSPCAG00000009292	SF3B1	100	98.620	ENSMLUG00000000840	SF3B1	100	98.620	Myotis_lucifugus
ENSPCAG00000009292	SF3B1	99	99.538	ENSNGAG00000021884	-	100	99.538	Nannospalax_galili
ENSPCAG00000009292	SF3B1	100	88.957	ENSNBRG00000015816	sf3b1	100	88.957	Neolamprologus_brichardi
ENSPCAG00000009292	SF3B1	100	99.847	ENSNLEG00000006861	SF3B1	100	99.847	Nomascus_leucogenys
ENSPCAG00000009292	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSPCAG00000009292	SF3B1	100	87.960	ENSOPRG00000008596	SF3B1	100	87.960	Ochotona_princeps
ENSPCAG00000009292	SF3B1	100	99.847	ENSODEG00000011153	-	100	99.847	Octodon_degus
ENSPCAG00000009292	SF3B1	100	92.705	ENSONIG00000013758	sf3b1	100	92.553	Oreochromis_niloticus
ENSPCAG00000009292	SF3B1	83	98.801	ENSOCUG00000012722	-	96	98.801	Oryctolagus_cuniculus
ENSPCAG00000009292	SF3B1	100	93.237	ENSORLG00000020219	sf3b1	100	93.237	Oryzias_latipes
ENSPCAG00000009292	SF3B1	100	93.237	ENSORLG00020001746	sf3b1	100	93.237	Oryzias_latipes_hni
ENSPCAG00000009292	SF3B1	64	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSPCAG00000009292	SF3B1	100	93.242	ENSOMEG00000019231	sf3b1	100	93.242	Oryzias_melastigma
ENSPCAG00000009292	SF3B1	100	99.770	ENSOARG00000015374	SF3B1	100	99.770	Ovis_aries
ENSPCAG00000009292	SF3B1	100	99.847	ENSPPAG00000035007	SF3B1	100	99.847	Pan_paniscus
ENSPCAG00000009292	SF3B1	100	99.847	ENSPPRG00000009090	SF3B1	100	99.847	Panthera_pardus
ENSPCAG00000009292	SF3B1	100	99.847	ENSPTIG00000021557	SF3B1	100	99.847	Panthera_tigris_altaica
ENSPCAG00000009292	SF3B1	99	91.301	ENSPTRG00000012771	SF3B1	99	91.301	Pan_troglodytes
ENSPCAG00000009292	SF3B1	100	99.847	ENSPANG00000013417	SF3B1	100	99.847	Papio_anubis
ENSPCAG00000009292	SF3B1	100	94.901	ENSPKIG00000000784	sf3b1	100	94.749	Paramormyrops_kingsleyae
ENSPCAG00000009292	SF3B1	99	97.836	ENSPSIG00000017222	SF3B1	98	97.836	Pelodiscus_sinensis
ENSPCAG00000009292	SF3B1	90	93.850	ENSPMGG00000004330	sf3b1	99	93.682	Periophthalmus_magnuspinnatus
ENSPCAG00000009292	SF3B1	99	99.846	ENSPEMG00000010699	Sf3b1	100	99.846	Peromyscus_maniculatus_bairdii
ENSPCAG00000009292	SF3B1	100	89.901	ENSPMAG00000001311	sf3b1	100	90.053	Petromyzon_marinus
ENSPCAG00000009292	SF3B1	100	99.080	ENSPCIG00000010642	SF3B1	100	99.080	Phascolarctos_cinereus
ENSPCAG00000009292	SF3B1	100	93.171	ENSPFOG00000000073	sf3b1	100	93.171	Poecilia_formosa
ENSPCAG00000009292	SF3B1	100	93.242	ENSPLAG00000002293	sf3b1	100	93.242	Poecilia_latipinna
ENSPCAG00000009292	SF3B1	100	93.242	ENSPMEG00000000446	sf3b1	98	93.242	Poecilia_mexicana
ENSPCAG00000009292	SF3B1	100	93.318	ENSPREG00000019652	sf3b1	100	93.318	Poecilia_reticulata
ENSPCAG00000009292	SF3B1	100	98.631	ENSPPYG00000013044	SF3B1	96	98.631	Pongo_abelii
ENSPCAG00000009292	SF3B1	100	99.770	ENSPCOG00000024074	SF3B1	100	99.770	Propithecus_coquereli
ENSPCAG00000009292	SF3B1	100	99.847	ENSPVAG00000008302	SF3B1	100	99.847	Pteropus_vampyrus
ENSPCAG00000009292	SF3B1	100	92.629	ENSPNYG00000014939	sf3b1	100	92.477	Pundamilia_nyererei
ENSPCAG00000009292	SF3B1	100	93.845	ENSPNAG00000008288	sf3b1	100	93.845	Pygocentrus_nattereri
ENSPCAG00000009292	SF3B1	100	99.847	ENSRNOG00000013516	Sf3b1	100	99.847	Rattus_norvegicus
ENSPCAG00000009292	SF3B1	99	96.083	ENSRBIG00000026096	SF3B1	100	96.083	Rhinopithecus_bieti
ENSPCAG00000009292	SF3B1	100	99.847	ENSRROG00000031308	SF3B1	100	99.847	Rhinopithecus_roxellana
ENSPCAG00000009292	SF3B1	100	99.847	ENSSBOG00000020080	SF3B1	100	99.847	Saimiri_boliviensis_boliviensis
ENSPCAG00000009292	SF3B1	100	99.156	ENSSHAG00000017564	SF3B1	100	99.156	Sarcophilus_harrisii
ENSPCAG00000009292	SF3B1	100	94.457	ENSSFOG00015021535	sf3b1	100	94.609	Scleropages_formosus
ENSPCAG00000009292	SF3B1	99	92.803	ENSSMAG00000013977	sf3b1	99	92.652	Scophthalmus_maximus
ENSPCAG00000009292	SF3B1	100	93.237	ENSSDUG00000017422	sf3b1	100	93.237	Seriola_dumerili
ENSPCAG00000009292	SF3B1	100	93.161	ENSSLDG00000019495	sf3b1	100	93.161	Seriola_lalandi_dorsalis
ENSPCAG00000009292	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSPCAG00000009292	SF3B1	100	98.926	ENSSPUG00000000410	SF3B1	100	98.926	Sphenodon_punctatus
ENSPCAG00000009292	SF3B1	100	93.541	ENSSPAG00000010451	sf3b1	99	93.541	Stegastes_partitus
ENSPCAG00000009292	SF3B1	91	99.411	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSPCAG00000009292	SF3B1	100	99.156	ENSTGUG00000010553	SF3B1	100	99.156	Taeniopygia_guttata
ENSPCAG00000009292	SF3B1	100	93.237	ENSTRUG00000015534	sf3b1	100	93.085	Takifugu_rubripes
ENSPCAG00000009292	SF3B1	88	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSPCAG00000009292	SF3B1	92	93.932	ENSTTRG00000003414	SF3B1	92	93.932	Tursiops_truncatus
ENSPCAG00000009292	SF3B1	94	95.688	ENSUAMG00000018506	SF3B1	99	98.785	Ursus_americanus
ENSPCAG00000009292	SF3B1	100	99.847	ENSUMAG00000020945	SF3B1	100	99.847	Ursus_maritimus
ENSPCAG00000009292	SF3B1	100	91.718	ENSVPAG00000005798	SF3B1	100	91.718	Vicugna_pacos
ENSPCAG00000009292	SF3B1	100	99.847	ENSVVUG00000025948	SF3B1	95	99.847	Vulpes_vulpes
ENSPCAG00000009292	SF3B1	100	96.475	ENSXETG00000013339	sf3b1	100	96.475	Xenopus_tropicalis
ENSPCAG00000009292	SF3B1	100	89.755	ENSXCOG00000018086	sf3b1	100	89.642	Xiphophorus_couchianus
ENSPCAG00000009292	SF3B1	100	93.242	ENSXMAG00000007369	sf3b1	100	93.538	Xiphophorus_maculatus