EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000009543 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 53246 bases
Position: chrscaffold_887:51065-104310
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000008929	RRM_1	PF00076.22	4.4e-29	1	3
ENSPCAP00000008929	RRM_1	PF00076.22	4.4e-29	2	3
ENSPCAP00000008929	RRM_1	PF00076.22	4.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000009570	SPEN-201	10614	-	ENSPCAP00000008929	3537 (aa)	-	UPI00018AF84B

Gene Model

Click here to download ENSPCAG00000009543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009543	SPEN	92	86.728	ENSG00000065526	SPEN	99	97.643	Homo_sapiens
ENSPCAG00000009543	SPEN	75	80.328	ENSAPOG00000009853	-	87	70.259	Acanthochromis_polyacanthus
ENSPCAG00000009543	SPEN	75	74.874	ENSAPOG00000011411	si:ch1073-335m2.2	87	74.874	Acanthochromis_polyacanthus
ENSPCAG00000009543	SPEN	92	88.889	ENSAMEG00000011817	SPEN	88	91.459	Ailuropoda_melanoleuca
ENSPCAG00000009543	SPEN	75	80.328	ENSAOCG00000014505	-	87	70.259	Amphiprion_ocellaris
ENSPCAG00000009543	SPEN	59	68.098	ENSAOCG00000008077	si:ch1073-335m2.2	68	68.098	Amphiprion_ocellaris
ENSPCAG00000009543	SPEN	75	80.328	ENSAPEG00000010288	-	87	70.259	Amphiprion_percula
ENSPCAG00000009543	SPEN	83	68.098	ENSAPEG00000013515	si:ch1073-335m2.2	67	68.098	Amphiprion_percula
ENSPCAG00000009543	SPEN	75	80.328	ENSATEG00000007674	si:ch1073-335m2.2	68	80.328	Anabas_testudineus
ENSPCAG00000009543	SPEN	78	73.469	ENSATEG00000005627	-	87	70.259	Anabas_testudineus
ENSPCAG00000009543	SPEN	80	72.327	ENSAPLG00000012618	SPEN	80	76.868	Anas_platyrhynchos
ENSPCAG00000009543	SPEN	88	70.370	ENSACAG00000013761	SPEN	89	73.050	Anolis_carolinensis
ENSPCAG00000009543	SPEN	92	88.272	ENSANAG00000034428	SPEN	88	92.527	Aotus_nancymaae
ENSPCAG00000009543	SPEN	87	67.347	ENSACLG00000016922	-	90	65.323	Astatotilapia_calliptera
ENSPCAG00000009543	SPEN	76	72.000	ENSAMXG00000012485	spen	88	68.000	Astyanax_mexicanus
ENSPCAG00000009543	SPEN	92	86.025	ENSBTAG00000018729	SPEN	88	89.680	Bos_taurus
ENSPCAG00000009543	SPEN	92	88.199	ENSCJAG00000008527	SPEN	88	92.527	Callithrix_jacchus
ENSPCAG00000009543	SPEN	83	82.724	ENSCAFG00000016132	-	88	89.385	Canis_familiaris
ENSPCAG00000009543	SPEN	92	86.335	ENSCHIG00000025070	SPEN	88	89.680	Capra_hircus
ENSPCAG00000009543	SPEN	87	88.820	ENSTSYG00000036016	SPEN	91	91.103	Carlito_syrichta
ENSPCAG00000009543	SPEN	92	86.068	ENSCAPG00000013803	SPEN	88	90.780	Cavia_aperea
ENSPCAG00000009543	SPEN	92	86.068	ENSCPOG00000014036	SPEN	89	90.780	Cavia_porcellus
ENSPCAG00000009543	SPEN	92	87.963	ENSCCAG00000020258	SPEN	87	92.527	Cebus_capucinus
ENSPCAG00000009543	SPEN	92	87.651	ENSCATG00000015079	SPEN	88	92.171	Cercocebus_atys
ENSPCAG00000009543	SPEN	92	87.307	ENSCLAG00000002018	SPEN	91	88.959	Chinchilla_lanigera
ENSPCAG00000009543	SPEN	92	87.651	ENSCSAG00000000841	SPEN	88	92.171	Chlorocebus_sabaeus
ENSPCAG00000009543	SPEN	89	73.026	ENSCPBG00000010477	SPEN	88	75.801	Chrysemys_picta_bellii
ENSPCAG00000009543	SPEN	92	87.651	ENSCANG00000034547	SPEN	88	92.171	Colobus_angolensis_palliatus
ENSPCAG00000009543	SPEN	92	86.503	ENSCGRG00001007725	Spen	88	90.000	Cricetulus_griseus_chok1gshd
ENSPCAG00000009543	SPEN	92	86.503	ENSCGRG00000010581	Spen	88	90.000	Cricetulus_griseus_crigri
ENSPCAG00000009543	SPEN	86	77.551	ENSCSEG00000003915	-	87	70.690	Cynoglossus_semilaevis
ENSPCAG00000009543	SPEN	87	68.103	ENSCVAG00000016346	-	87	70.259	Cyprinodon_variegatus
ENSPCAG00000009543	SPEN	74	74.879	ENSCVAG00000009075	si:ch1073-335m2.2	78	74.879	Cyprinodon_variegatus
ENSPCAG00000009543	SPEN	76	66.667	ENSDARG00000074245	spen	87	66.667	Danio_rerio
ENSPCAG00000009543	SPEN	67	80.000	ENSDARG00000074332	si:ch1073-335m2.2	71	80.000	Danio_rerio
ENSPCAG00000009543	SPEN	92	87.346	ENSDNOG00000041948	SPEN	89	91.815	Dasypus_novemcinctus
ENSPCAG00000009543	SPEN	92	85.933	ENSDORG00000023909	Spen	88	90.714	Dipodomys_ordii
ENSPCAG00000009543	SPEN	59	97.810	ENSETEG00000016692	-	58	97.810	Echinops_telfairi
ENSPCAG00000009543	SPEN	92	88.450	ENSEASG00005015911	SPEN	88	91.815	Equus_asinus_asinus
ENSPCAG00000009543	SPEN	92	88.754	ENSECAG00000008833	SPEN	88	92.171	Equus_caballus
ENSPCAG00000009543	SPEN	69	95.349	ENSEEUG00000010255	SPEN	70	95.349	Erinaceus_europaeus
ENSPCAG00000009543	SPEN	65	83.626	ENSELUG00000007726	si:ch1073-335m2.2	68	83.626	Esox_lucius
ENSPCAG00000009543	SPEN	72	71.711	ENSFALG00000003551	SPEN	82	74.377	Ficedula_albicollis
ENSPCAG00000009543	SPEN	91	90.493	ENSFDAG00000010212	SPEN	89	90.780	Fukomys_damarensis
ENSPCAG00000009543	SPEN	74	73.430	ENSFHEG00000004544	si:ch1073-335m2.2	78	73.430	Fundulus_heteroclitus
ENSPCAG00000009543	SPEN	73	74.627	ENSGMOG00000008397	-	85	74.627	Gadus_morhua
ENSPCAG00000009543	SPEN	77	79.888	ENSGMOG00000008156	si:ch1073-335m2.2	77	79.888	Gadus_morhua
ENSPCAG00000009543	SPEN	89	74.342	ENSGALG00000036932	SPEN	80	77.224	Gallus_gallus
ENSPCAG00000009543	SPEN	88	60.424	ENSGAFG00000015819	-	89	61.484	Gambusia_affinis
ENSPCAG00000009543	SPEN	65	83.432	ENSGAFG00000021570	si:ch1073-335m2.2	68	83.432	Gambusia_affinis
ENSPCAG00000009543	SPEN	51	79.412	ENSGACG00000001176	si:ch1073-335m2.2	72	79.412	Gasterosteus_aculeatus
ENSPCAG00000009543	SPEN	87	65.992	ENSGACG00000005341	-	87	65.992	Gasterosteus_aculeatus
ENSPCAG00000009543	SPEN	89	95.550	ENSGAGG00000020785	SPEN	90	76.868	Gopherus_agassizii
ENSPCAG00000009543	SPEN	92	88.889	ENSGGOG00000012041	SPEN	88	91.103	Gorilla_gorilla
ENSPCAG00000009543	SPEN	68	83.626	ENSHBUG00000023253	si:ch1073-335m2.2	73	83.626	Haplochromis_burtoni
ENSPCAG00000009543	SPEN	87	67.347	ENSHBUG00000020626	-	88	65.323	Haplochromis_burtoni
ENSPCAG00000009543	SPEN	92	86.364	ENSHGLG00000019259	SPEN	88	91.135	Heterocephalus_glaber_female
ENSPCAG00000009543	SPEN	81	86.364	ENSHGLG00100019294	SPEN	82	91.135	Heterocephalus_glaber_male
ENSPCAG00000009543	SPEN	73	56.696	ENSHCOG00000006004	si:ch1073-335m2.2	80	56.696	Hippocampus_comes
ENSPCAG00000009543	SPEN	86	74.510	ENSIPUG00000021668	spen	86	72.222	Ictalurus_punctatus
ENSPCAG00000009543	SPEN	72	76.705	ENSIPUG00000018212	si:ch1073-335m2.2	70	76.705	Ictalurus_punctatus
ENSPCAG00000009543	SPEN	92	86.103	ENSSTOG00000021428	SPEN	90	91.815	Ictidomys_tridecemlineatus
ENSPCAG00000009543	SPEN	92	86.747	ENSJJAG00000010882	Spen	88	91.459	Jaculus_jaculus
ENSPCAG00000009543	SPEN	88	69.388	ENSKMAG00000003882	-	88	65.476	Kryptolebias_marmoratus
ENSPCAG00000009543	SPEN	73	63.516	ENSKMAG00000021725	si:ch1073-335m2.2	77	73.892	Kryptolebias_marmoratus
ENSPCAG00000009543	SPEN	74	79.781	ENSLBEG00000019129	-	90	65.323	Labrus_bergylta
ENSPCAG00000009543	SPEN	68	76.796	ENSLBEG00000020855	si:ch1073-335m2.2	72	76.796	Labrus_bergylta
ENSPCAG00000009543	SPEN	84	94.410	ENSLACG00000003258	SPEN	86	94.410	Latimeria_chalumnae
ENSPCAG00000009543	SPEN	88	66.221	ENSLOCG00000007896	si:ch1073-335m2.2	87	73.413	Lepisosteus_oculatus
ENSPCAG00000009543	SPEN	92	90.000	ENSLAFG00000004524	SPEN	90	89.441	Loxodonta_africana
ENSPCAG00000009543	SPEN	92	89.206	ENSMFAG00000041974	SPEN	88	92.171	Macaca_fascicularis
ENSPCAG00000009543	SPEN	92	90.260	ENSMMUG00000008026	SPEN	88	92.171	Macaca_mulatta
ENSPCAG00000009543	SPEN	92	89.206	ENSMNEG00000042402	SPEN	88	92.171	Macaca_nemestrina
ENSPCAG00000009543	SPEN	92	87.651	ENSMLEG00000039293	SPEN	88	92.171	Mandrillus_leucophaeus
ENSPCAG00000009543	SPEN	51	74.000	ENSMAMG00000023870	si:ch1073-335m2.2	55	74.000	Mastacembelus_armatus
ENSPCAG00000009543	SPEN	81	65.323	ENSMZEG00005021491	-	90	65.323	Maylandia_zebra
ENSPCAG00000009543	SPEN	92	85.015	ENSMAUG00000008318	Spen	88	87.544	Mesocricetus_auratus
ENSPCAG00000009543	SPEN	92	89.198	ENSMICG00000030994	SPEN	88	92.527	Microcebus_murinus
ENSPCAG00000009543	SPEN	92	87.346	ENSMOCG00000016083	Spen	88	91.459	Microtus_ochrogaster
ENSPCAG00000009543	SPEN	64	79.888	ENSMMOG00000021742	si:ch1073-335m2.2	69	79.888	Mola_mola
ENSPCAG00000009543	SPEN	89	72.787	ENSMODG00000003411	SPEN	88	74.733	Monodelphis_domestica
ENSPCAG00000009543	SPEN	86	71.429	ENSMALG00000008625	-	87	69.828	Monopterus_albus
ENSPCAG00000009543	SPEN	92	86.850	MGP_CAROLIEiJ_G0026745	Spen	88	90.391	Mus_caroli
ENSPCAG00000009543	SPEN	92	86.544	ENSMUSG00000040761	Spen	88	90.036	Mus_musculus
ENSPCAG00000009543	SPEN	92	85.321	MGP_PahariEiJ_G0029076	Spen	88	89.324	Mus_pahari
ENSPCAG00000009543	SPEN	92	86.239	MGP_SPRETEiJ_G0027724	Spen	88	89.680	Mus_spretus
ENSPCAG00000009543	SPEN	92	86.446	ENSMPUG00000016317	SPEN	90	91.459	Mustela_putorius_furo
ENSPCAG00000009543	SPEN	90	83.796	ENSMLUG00000010144	SPEN	90	83.735	Myotis_lucifugus
ENSPCAG00000009543	SPEN	92	86.970	ENSNGAG00000000641	Spen	87	91.103	Nannospalax_galili
ENSPCAG00000009543	SPEN	76	69.397	ENSNBRG00000022090	-	89	69.397	Neolamprologus_brichardi
ENSPCAG00000009543	SPEN	68	83.626	ENSNBRG00000005733	si:ch1073-335m2.2	74	83.626	Neolamprologus_brichardi
ENSPCAG00000009543	SPEN	92	87.087	ENSNLEG00000007652	SPEN	88	92.171	Nomascus_leucogenys
ENSPCAG00000009543	SPEN	80	94.792	ENSMEUG00000002422	SPEN	81	94.792	Notamacropus_eugenii
ENSPCAG00000009543	SPEN	86	88.206	ENSOPRG00000015800	SPEN	82	90.747	Ochotona_princeps
ENSPCAG00000009543	SPEN	87	65.323	ENSONIG00000006573	-	76	78.385	Oreochromis_niloticus
ENSPCAG00000009543	SPEN	92	87.654	ENSOCUG00000010840	SPEN	88	91.459	Oryctolagus_cuniculus
ENSPCAG00000009543	SPEN	69	80.702	ENSORLG00000018414	si:ch1073-335m2.2	81	56.610	Oryzias_latipes
ENSPCAG00000009543	SPEN	78	78.173	ENSORLG00000028894	-	90	78.173	Oryzias_latipes
ENSPCAG00000009543	SPEN	78	78.173	ENSORLG00020007735	-	90	78.173	Oryzias_latipes_hni
ENSPCAG00000009543	SPEN	56	78.173	ENSORLG00015022085	-	87	78.173	Oryzias_latipes_hsok
ENSPCAG00000009543	SPEN	68	80.117	ENSORLG00015005537	si:ch1073-335m2.2	81	56.701	Oryzias_latipes_hsok
ENSPCAG00000009543	SPEN	76	83.333	ENSOMEG00000007639	-	76	83.333	Oryzias_melastigma
ENSPCAG00000009543	SPEN	76	63.492	ENSOMEG00000004509	si:ch1073-335m2.2	79	63.492	Oryzias_melastigma
ENSPCAG00000009543	SPEN	92	88.146	ENSOGAG00000025110	SPEN	88	91.815	Otolemur_garnettii
ENSPCAG00000009543	SPEN	92	85.714	ENSOARG00000008477	SPEN	88	89.324	Ovis_aries
ENSPCAG00000009543	SPEN	92	87.037	ENSPPAG00000035690	SPEN	89	91.459	Pan_paniscus
ENSPCAG00000009543	SPEN	92	87.037	ENSPTRG00000000210	SPEN	88	91.459	Pan_troglodytes
ENSPCAG00000009543	SPEN	92	89.198	ENSPANG00000006293	SPEN	88	92.171	Papio_anubis
ENSPCAG00000009543	SPEN	84	89.080	ENSPKIG00000010492	si:ch1073-335m2.2	87	89.080	Paramormyrops_kingsleyae
ENSPCAG00000009543	SPEN	84	85.556	ENSPKIG00000002617	SPEN	86	85.556	Paramormyrops_kingsleyae
ENSPCAG00000009543	SPEN	80	75.342	ENSPSIG00000008026	SPEN	80	76.157	Pelodiscus_sinensis
ENSPCAG00000009543	SPEN	92	87.462	ENSPEMG00000022997	Spen	89	90.747	Peromyscus_maniculatus_bairdii
ENSPCAG00000009543	SPEN	65	75.622	ENSPLAG00000016625	si:ch1073-335m2.2	68	75.622	Poecilia_latipinna
ENSPCAG00000009543	SPEN	87	68.966	ENSPMEG00000006764	-	88	68.966	Poecilia_mexicana
ENSPCAG00000009543	SPEN	50	75.622	ENSPMEG00000002674	si:ch1073-335m2.2	70	75.622	Poecilia_mexicana
ENSPCAG00000009543	SPEN	87	68.966	ENSPREG00000010399	-	88	68.966	Poecilia_reticulata
ENSPCAG00000009543	SPEN	60	84.615	ENSPREG00000005357	si:ch1073-335m2.2	64	84.615	Poecilia_reticulata
ENSPCAG00000009543	SPEN	92	87.654	ENSPPYG00000001834	SPEN	88	91.815	Pongo_abelii
ENSPCAG00000009543	SPEN	92	87.077	ENSPCOG00000021735	SPEN	88	90.071	Propithecus_coquereli
ENSPCAG00000009543	SPEN	75	91.912	ENSPVAG00000013794	SPEN	72	91.966	Pteropus_vampyrus
ENSPCAG00000009543	SPEN	68	83.626	ENSPNYG00000009042	si:ch1073-335m2.2	74	83.626	Pundamilia_nyererei
ENSPCAG00000009543	SPEN	87	67.347	ENSPNYG00000012379	-	88	65.323	Pundamilia_nyererei
ENSPCAG00000009543	SPEN	72	79.545	ENSPNAG00000011452	si:ch1073-335m2.2	76	79.545	Pygocentrus_nattereri
ENSPCAG00000009543	SPEN	86	75.000	ENSPNAG00000020795	spen	88	67.200	Pygocentrus_nattereri
ENSPCAG00000009543	SPEN	92	85.627	ENSRNOG00000033556	Spen	90	88.968	Rattus_norvegicus
ENSPCAG00000009543	SPEN	92	89.538	ENSRBIG00000039654	SPEN	89	92.171	Rhinopithecus_bieti
ENSPCAG00000009543	SPEN	92	87.651	ENSRROG00000035686	SPEN	90	92.171	Rhinopithecus_roxellana
ENSPCAG00000009543	SPEN	92	89.198	ENSSBOG00000028770	SPEN	91	91.459	Saimiri_boliviensis_boliviensis
ENSPCAG00000009543	SPEN	89	72.026	ENSSHAG00000004960	SPEN	79	90.952	Sarcophilus_harrisii
ENSPCAG00000009543	SPEN	74	89.080	ENSSFOG00015010267	si:ch1073-335m2.2	77	89.080	Scleropages_formosus
ENSPCAG00000009543	SPEN	86	73.469	ENSSMAG00000008996	-	68	70.259	Scophthalmus_maximus
ENSPCAG00000009543	SPEN	56	73.077	ENSSMAG00000000125	si:ch1073-335m2.2	57	73.077	Scophthalmus_maximus
ENSPCAG00000009543	SPEN	76	81.421	ENSSDUG00000003476	-	89	71.552	Seriola_dumerili
ENSPCAG00000009543	SPEN	74	74.020	ENSSDUG00000008416	si:ch1073-335m2.2	78	73.558	Seriola_dumerili
ENSPCAG00000009543	SPEN	70	73.558	ENSSLDG00000023347	si:ch1073-335m2.2	74	73.558	Seriola_lalandi_dorsalis
ENSPCAG00000009543	SPEN	76	81.421	ENSSLDG00000012950	-	87	71.552	Seriola_lalandi_dorsalis
ENSPCAG00000009543	SPEN	81	95.370	ENSSPUG00000001866	-	91	77.224	Sphenodon_punctatus
ENSPCAG00000009543	SPEN	86	70.690	ENSSPAG00000006014	-	87	70.690	Stegastes_partitus
ENSPCAG00000009543	SPEN	73	83.626	ENSSPAG00000012454	si:ch1073-335m2.2	84	83.626	Stegastes_partitus
ENSPCAG00000009543	SPEN	83	85.330	ENSSSCG00000034484	SPEN	94	85.195	Sus_scrofa
ENSPCAG00000009543	SPEN	86	69.828	ENSTRUG00000024350	-	87	69.828	Takifugu_rubripes
ENSPCAG00000009543	SPEN	65	79.661	ENSTRUG00000021008	si:ch1073-335m2.2	66	79.661	Takifugu_rubripes
ENSPCAG00000009543	SPEN	70	81.421	ENSTNIG00000010907	-	76	72.714	Tetraodon_nigroviridis
ENSPCAG00000009543	SPEN	74	81.871	ENSTNIG00000014666	si:ch1073-335m2.2	67	81.871	Tetraodon_nigroviridis
ENSPCAG00000009543	SPEN	74	92.991	ENSTBEG00000003628	SPEN	72	92.991	Tupaia_belangeri
ENSPCAG00000009543	SPEN	74	94.634	ENSTTRG00000015704	SPEN	72	94.634	Tursiops_truncatus
ENSPCAG00000009543	SPEN	92	86.787	ENSUAMG00000009600	SPEN	88	91.459	Ursus_americanus
ENSPCAG00000009543	SPEN	92	86.787	ENSUMAG00000021641	SPEN	88	91.459	Ursus_maritimus
ENSPCAG00000009543	SPEN	92	87.048	ENSVVUG00000028951	SPEN	90	92.171	Vulpes_vulpes
ENSPCAG00000009543	SPEN	88	69.965	ENSXETG00000023114	SPEN	88	70.357	Xenopus_tropicalis
ENSPCAG00000009543	SPEN	61	83.432	ENSXCOG00000004516	si:ch1073-335m2.2	67	83.432	Xiphophorus_couchianus
ENSPCAG00000009543	SPEN	66	74.129	ENSXMAG00000029887	si:ch1073-335m2.2	69	74.627	Xiphophorus_maculatus
ENSPCAG00000009543	SPEN	88	60.424	ENSXMAG00000021384	-	89	61.484	Xiphophorus_maculatus