EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPCAG00000009673 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Minus strand
Length
147943 bases
Position
chrGeneScaffold_4541:19827-167769
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000009031RRM_1PF00076.223.5e-3312
ENSPCAP00000009031RRM_1PF00076.223.5e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000009677RBMS1-2011221-ENSPCAP00000009031406 (aa)-UPI00018B0682
Gene Model
Click here to download ENSPCAG00000009673's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009673's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPCAG00000009673RBMS18672.500ENSPCAG00000010311RBMS28872.376
ENSPCAG00000009673RBMS18756.461ENSPCAG00000006307RBMS38058.543
ENSPCAG00000009673RBMS15433.871ENSPCAG00000008215ELAVL46835.266
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000009673RBMS110092.365ENSG00000153250RBMS110099.213Homo_sapiens
ENSPCAG00000009673RBMS17868.571ENSAPOG00000013761rbms1a8169.565Acanthochromis_polyacanthus
ENSPCAG00000009673RBMS18772.238ENSAPOG00000024437-9467.218Acanthochromis_polyacanthus
ENSPCAG00000009673RBMS19489.406ENSAMEG00000012661RBMS110089.406Ailuropoda_melanoleuca
ENSPCAG00000009673RBMS17465.333ENSACIG00000000113rbms1a8165.552Amphilophus_citrinellus
ENSPCAG00000009673RBMS19671.722ENSACIG00000021498RBMS19771.722Amphilophus_citrinellus
ENSPCAG00000009673RBMS19373.421ENSAOCG00000014482-9573.421Amphiprion_ocellaris
ENSPCAG00000009673RBMS17868.571ENSAOCG00000010066rbms1a8169.565Amphiprion_ocellaris
ENSPCAG00000009673RBMS19373.421ENSAPEG00000018371-9573.421Amphiprion_percula
ENSPCAG00000009673RBMS17868.571ENSAPEG00000023563rbms1a8169.565Amphiprion_percula
ENSPCAG00000009673RBMS19569.171ENSATEG00000018573RBMS18971.591Anabas_testudineus
ENSPCAG00000009673RBMS17868.571ENSATEG00000015450rbms1a7869.565Anabas_testudineus
ENSPCAG00000009673RBMS19586.234ENSAPLG00000007282RBMS110086.432Anas_platyrhynchos
ENSPCAG00000009673RBMS19486.719ENSACAG00000011984RBMS17984.896Anolis_carolinensis
ENSPCAG00000009673RBMS17990.373ENSANAG00000024424RBMS110090.373Aotus_nancymaae
ENSPCAG00000009673RBMS19570.573ENSACLG00000013048RBMS19471.809Astatotilapia_calliptera
ENSPCAG00000009673RBMS17468.000ENSACLG00000021512rbms1a8468.227Astatotilapia_calliptera
ENSPCAG00000009673RBMS110070.343ENSAMXG00000009969RBMS110071.569Astyanax_mexicanus
ENSPCAG00000009673RBMS18769.318ENSAMXG00000002146rbms1a8869.318Astyanax_mexicanus
ENSPCAG00000009673RBMS110088.863ENSBTAG00000005180RBMS110088.863Bos_taurus
ENSPCAG00000009673RBMS110092.118ENSCJAG00000014861-10092.118Callithrix_jacchus
ENSPCAG00000009673RBMS19984.406ENSCJAG00000012871-9987.766Callithrix_jacchus
ENSPCAG00000009673RBMS19184.282ENSCJAG00000022465-9884.031Callithrix_jacchus
ENSPCAG00000009673RBMS19491.623ENSCAFG00000009922RBMS19591.623Canis_familiaris
ENSPCAG00000009673RBMS110091.379ENSCAFG00020006120RBMS110091.379Canis_lupus_dingo
ENSPCAG00000009673RBMS110091.626ENSCHIG00000023380RBMS110091.626Capra_hircus
ENSPCAG00000009673RBMS110092.611ENSTSYG00000005584RBMS110092.611Carlito_syrichta
ENSPCAG00000009673RBMS110091.379ENSCPOG00000012310RBMS110091.379Cavia_porcellus
ENSPCAG00000009673RBMS110092.118ENSCCAG00000033841RBMS110092.118Cebus_capucinus
ENSPCAG00000009673RBMS110092.611ENSCATG00000043032RBMS110092.611Cercocebus_atys
ENSPCAG00000009673RBMS110091.379ENSCLAG00000003031RBMS110091.379Chinchilla_lanigera
ENSPCAG00000009673RBMS110092.611ENSCSAG00000015687RBMS110092.611Chlorocebus_sabaeus
ENSPCAG00000009673RBMS15498.837ENSCHOG00000001579RBMS17398.837Choloepus_hoffmanni
ENSPCAG00000009673RBMS110088.424ENSCPBG00000026455RBMS110088.424Chrysemys_picta_bellii
ENSPCAG00000009673RBMS110092.611ENSCANG00000042152RBMS110092.611Colobus_angolensis_palliatus
ENSPCAG00000009673RBMS110090.394ENSCGRG00001022833Rbms110090.394Cricetulus_griseus_chok1gshd
ENSPCAG00000009673RBMS110090.394ENSCGRG00000008824Rbms110090.394Cricetulus_griseus_crigri
ENSPCAG00000009673RBMS19468.912ENSCSEG00000010652RBMS19666.839Cynoglossus_semilaevis
ENSPCAG00000009673RBMS17866.032ENSCSEG00000000889rbms1a8166.890Cynoglossus_semilaevis
ENSPCAG00000009673RBMS17868.354ENSCVAG00000014698rbms1a7869.000Cyprinodon_variegatus
ENSPCAG00000009673RBMS19369.681ENSCVAG00000002027RBMS19670.739Cyprinodon_variegatus
ENSPCAG00000009673RBMS18769.602ENSDARG00000074023rbms1a8769.602Danio_rerio
ENSPCAG00000009673RBMS18786.957ENSDNOG00000040691RBMS19586.957Dasypus_novemcinctus
ENSPCAG00000009673RBMS110091.133ENSDORG00000007103Rbms110091.133Dipodomys_ordii
ENSPCAG00000009673RBMS19481.365ENSETEG00000012135RBMS110081.365Echinops_telfairi
ENSPCAG00000009673RBMS110088.626ENSEASG00005023132RBMS110088.626Equus_asinus_asinus
ENSPCAG00000009673RBMS110092.118ENSECAG00000019894RBMS110092.118Equus_caballus
ENSPCAG00000009673RBMS179100.000ENSEEUG00000005628RBMS179100.000Erinaceus_europaeus
ENSPCAG00000009673RBMS17872.327ENSELUG00000018923rbms1a8274.582Esox_lucius
ENSPCAG00000009673RBMS19365.526ENSELUG00000019328RBMS19465.526Esox_lucius
ENSPCAG00000009673RBMS110091.872ENSFCAG00000012524RBMS110091.872Felis_catus
ENSPCAG00000009673RBMS18785.795ENSFALG00000004440RBMS19485.795Ficedula_albicollis
ENSPCAG00000009673RBMS110091.626ENSFDAG00000015692RBMS110091.626Fukomys_damarensis
ENSPCAG00000009673RBMS17868.254ENSFHEG00000005662rbms1a7982.166Fundulus_heteroclitus
ENSPCAG00000009673RBMS19368.617ENSFHEG00000000720RBMS18969.886Fundulus_heteroclitus
ENSPCAG00000009673RBMS17464.630ENSGMOG00000000525rbms1a8664.630Gadus_morhua
ENSPCAG00000009673RBMS19486.387ENSGALG00000011132RBMS19586.387Gallus_gallus
ENSPCAG00000009673RBMS17967.290ENSGAFG00000011633rbms1a8369.231Gambusia_affinis
ENSPCAG00000009673RBMS19468.750ENSGAFG00000007708RBMS18869.886Gambusia_affinis
ENSPCAG00000009673RBMS18771.105ENSGACG00000005671RBMS18971.307Gasterosteus_aculeatus
ENSPCAG00000009673RBMS17468.000ENSGACG00000015174rbms1a8368.227Gasterosteus_aculeatus
ENSPCAG00000009673RBMS110088.177ENSGAGG00000007866RBMS110088.177Gopherus_agassizii
ENSPCAG00000009673RBMS19690.769ENSGGOG00000001264RBMS110090.769Gorilla_gorilla
ENSPCAG00000009673RBMS19489.267ENSGGOG00000043756-9688.144Gorilla_gorilla
ENSPCAG00000009673RBMS18179.091ENSHBUG00000004516RBMS18580.247Haplochromis_burtoni
ENSPCAG00000009673RBMS17468.000ENSHBUG00000004802rbms1a8468.227Haplochromis_burtoni
ENSPCAG00000009673RBMS110090.887ENSHGLG00000010387RBMS110090.887Heterocephalus_glaber_female
ENSPCAG00000009673RBMS19888.693ENSHGLG00100014105RBMS19888.693Heterocephalus_glaber_male
ENSPCAG00000009673RBMS18079.876ENSHCOG00000016668RBMS18179.876Hippocampus_comes
ENSPCAG00000009673RBMS17867.619ENSHCOG00000020097rbms1a7968.562Hippocampus_comes
ENSPCAG00000009673RBMS110073.219ENSIPUG00000014677RBMS110073.219Ictalurus_punctatus
ENSPCAG00000009673RBMS18770.170ENSIPUG00000010131RBMS18870.170Ictalurus_punctatus
ENSPCAG00000009673RBMS110091.379ENSSTOG00000012501RBMS110091.379Ictidomys_tridecemlineatus
ENSPCAG00000009673RBMS110090.887ENSJJAG00000016543Rbms110090.887Jaculus_jaculus
ENSPCAG00000009673RBMS19372.872ENSKMAG00000013911RBMS19472.872Kryptolebias_marmoratus
ENSPCAG00000009673RBMS17866.349ENSKMAG00000011839-7867.224Kryptolebias_marmoratus
ENSPCAG00000009673RBMS19372.872ENSLBEG00000005787RBMS19472.872Labrus_bergylta
ENSPCAG00000009673RBMS17469.000ENSLBEG00000025962rbms1a7869.231Labrus_bergylta
ENSPCAG00000009673RBMS19576.093ENSLACG00000004324RBMS19575.711Latimeria_chalumnae
ENSPCAG00000009673RBMS19380.053ENSLOCG00000008622rbms1a9480.053Lepisosteus_oculatus
ENSPCAG00000009673RBMS19491.623ENSLAFG00000017217RBMS110091.623Loxodonta_africana
ENSPCAG00000009673RBMS110092.611ENSMFAG00000000274RBMS110092.611Macaca_fascicularis
ENSPCAG00000009673RBMS110092.611ENSMMUG00000016825RBMS110092.611Macaca_mulatta
ENSPCAG00000009673RBMS110092.611ENSMNEG00000039425RBMS110092.611Macaca_nemestrina
ENSPCAG00000009673RBMS19987.654ENSMLEG00000031517RBMS19991.885Mandrillus_leucophaeus
ENSPCAG00000009673RBMS18770.255ENSMAMG00000003159-9270.655Mastacembelus_armatus
ENSPCAG00000009673RBMS17866.456ENSMAMG00000005018rbms1a7967.224Mastacembelus_armatus
ENSPCAG00000009673RBMS17479.402ENSMZEG00005007313RBMS18379.667Maylandia_zebra
ENSPCAG00000009673RBMS17468.000ENSMZEG00005005661rbms1a8468.227Maylandia_zebra
ENSPCAG00000009673RBMS18786.648ENSMGAG00000011054RBMS110085.106Meleagris_gallopavo
ENSPCAG00000009673RBMS110089.901ENSMAUG00000008550Rbms110089.901Mesocricetus_auratus
ENSPCAG00000009673RBMS110091.872ENSMICG00000008325RBMS110091.872Microcebus_murinus
ENSPCAG00000009673RBMS110089.655ENSMOCG00000022617Rbms110089.655Microtus_ochrogaster
ENSPCAG00000009673RBMS19471.615ENSMMOG00000003707RBMS19671.615Mola_mola
ENSPCAG00000009673RBMS17469.103ENSMMOG00000018249rbms1a8169.333Mola_mola
ENSPCAG00000009673RBMS110088.177ENSMODG00000005250RBMS110088.177Monodelphis_domestica
ENSPCAG00000009673RBMS17867.722ENSMALG00000014235rbms1a7868.667Monopterus_albus
ENSPCAG00000009673RBMS17479.402ENSMALG00000015715-7779.667Monopterus_albus
ENSPCAG00000009673RBMS110089.409MGP_CAROLIEiJ_G0023586Rbms110089.409Mus_caroli
ENSPCAG00000009673RBMS110089.409ENSMUSG00000026970Rbms110089.409Mus_musculus
ENSPCAG00000009673RBMS110088.916MGP_PahariEiJ_G0025037Rbms110088.916Mus_pahari
ENSPCAG00000009673RBMS110089.655MGP_SPRETEiJ_G0024508Rbms110089.655Mus_spretus
ENSPCAG00000009673RBMS110087.678ENSMPUG00000000539RBMS110087.678Mustela_putorius_furo
ENSPCAG00000009673RBMS19983.175ENSMLUG00000008762RBMS19983.175Myotis_lucifugus
ENSPCAG00000009673RBMS110090.887ENSNGAG00000013636Rbms110090.887Nannospalax_galili
ENSPCAG00000009673RBMS18768.555ENSNBRG00000015151RBMS19468.750Neolamprologus_brichardi
ENSPCAG00000009673RBMS17468.333ENSNBRG00000020217rbms1a8468.562Neolamprologus_brichardi
ENSPCAG00000009673RBMS110092.365ENSNLEG00000001667RBMS110092.365Nomascus_leucogenys
ENSPCAG00000009673RBMS17973.602ENSMEUG00000000746RBMS110073.602Notamacropus_eugenii
ENSPCAG00000009673RBMS110085.468ENSOPRG00000012431RBMS110085.468Ochotona_princeps
ENSPCAG00000009673RBMS110091.379ENSODEG00000013934RBMS110091.379Octodon_degus
ENSPCAG00000009673RBMS19571.094ENSONIG00000008934RBMS19472.340Oreochromis_niloticus
ENSPCAG00000009673RBMS17468.667ENSONIG00000003329rbms1a7668.896Oreochromis_niloticus
ENSPCAG00000009673RBMS15356.379ENSOANG00000004477-9956.612Ornithorhynchus_anatinus
ENSPCAG00000009673RBMS19488.189ENSOANG00000006166RBMS19688.189Ornithorhynchus_anatinus
ENSPCAG00000009673RBMS19490.052ENSOCUG00000017365RBMS18990.052Oryctolagus_cuniculus
ENSPCAG00000009673RBMS17975.466ENSORLG00000016818RBMS18970.538Oryzias_latipes
ENSPCAG00000009673RBMS17866.032ENSORLG00000003917rbms1a8466.890Oryzias_latipes
ENSPCAG00000009673RBMS17975.155ENSORLG00020022335RBMS18970.255Oryzias_latipes_hni
ENSPCAG00000009673RBMS17865.714ENSORLG00020018663rbms1a8466.555Oryzias_latipes_hni
ENSPCAG00000009673RBMS17866.032ENSORLG00015016556rbms1a8466.890Oryzias_latipes_hsok
ENSPCAG00000009673RBMS17975.776ENSORLG00015018208RBMS18970.822Oryzias_latipes_hsok
ENSPCAG00000009673RBMS18075.153ENSOMEG00000002394RBMS19467.989Oryzias_melastigma
ENSPCAG00000009673RBMS18790.113ENSOGAG00000002900RBMS19490.113Otolemur_garnettii
ENSPCAG00000009673RBMS110091.626ENSOARG00000006870RBMS110091.626Ovis_aries
ENSPCAG00000009673RBMS19690.769ENSPPAG00000040083RBMS110091.623Pan_paniscus
ENSPCAG00000009673RBMS19388.298ENSPPAG00000036520-9988.298Pan_paniscus
ENSPCAG00000009673RBMS110091.872ENSPPRG00000005040RBMS110091.872Panthera_pardus
ENSPCAG00000009673RBMS19491.339ENSPTIG00000021240RBMS19491.339Panthera_tigris_altaica
ENSPCAG00000009673RBMS110092.365ENSPTRG00000052304RBMS110092.365Pan_troglodytes
ENSPCAG00000009673RBMS19588.601ENSPTRG00000039358-10088.342Pan_troglodytes
ENSPCAG00000009673RBMS110091.872ENSPANG00000001383RBMS110091.872Papio_anubis
ENSPCAG00000009673RBMS110073.839ENSPKIG00000001498rbms1a10072.861Paramormyrops_kingsleyae
ENSPCAG00000009673RBMS18774.788ENSPKIG00000012818rbms1a10072.414Paramormyrops_kingsleyae
ENSPCAG00000009673RBMS110087.685ENSPSIG00000010240RBMS110087.685Pelodiscus_sinensis
ENSPCAG00000009673RBMS17480.667ENSPMGG00000006310RBMS17682.510Periophthalmus_magnuspinnatus
ENSPCAG00000009673RBMS17467.667ENSPMGG00000004341rbms1a8067.893Periophthalmus_magnuspinnatus
ENSPCAG00000009673RBMS110090.640ENSPEMG00000009449Rbms110090.640Peromyscus_maniculatus_bairdii
ENSPCAG00000009673RBMS110088.177ENSPCIG00000018405RBMS110088.177Phascolarctos_cinereus
ENSPCAG00000009673RBMS19867.669ENSPFOG00000017483RBMS19867.669Poecilia_formosa
ENSPCAG00000009673RBMS17868.254ENSPFOG00000016116rbms1a7869.231Poecilia_formosa
ENSPCAG00000009673RBMS17868.254ENSPLAG00000013864rbms1a7869.231Poecilia_latipinna
ENSPCAG00000009673RBMS18769.886ENSPLAG00000000920RBMS18869.886Poecilia_latipinna
ENSPCAG00000009673RBMS17868.254ENSPMEG00000016185rbms1a8169.231Poecilia_mexicana
ENSPCAG00000009673RBMS19370.745ENSPMEG00000015838RBMS19470.745Poecilia_mexicana
ENSPCAG00000009673RBMS17868.254ENSPREG00000020161rbms1a7869.231Poecilia_reticulata
ENSPCAG00000009673RBMS19370.479ENSPREG00000008146RBMS19470.479Poecilia_reticulata
ENSPCAG00000009673RBMS110088.626ENSPPYG00000012879-10088.626Pongo_abelii
ENSPCAG00000009673RBMS110092.118ENSPCOG00000027294RBMS110092.118Propithecus_coquereli
ENSPCAG00000009673RBMS110079.064ENSPVAG00000010429RBMS110079.064Pteropus_vampyrus
ENSPCAG00000009673RBMS19571.094ENSPNYG00000002643RBMS19472.340Pundamilia_nyererei
ENSPCAG00000009673RBMS110070.833ENSPNAG00000023479RBMS110072.059Pygocentrus_nattereri
ENSPCAG00000009673RBMS18769.602ENSPNAG00000010225rbms1a8869.602Pygocentrus_nattereri
ENSPCAG00000009673RBMS110089.901ENSRNOG00000008482Rbms110089.901Rattus_norvegicus
ENSPCAG00000009673RBMS110092.365ENSRBIG00000044262RBMS110092.365Rhinopithecus_bieti
ENSPCAG00000009673RBMS110089.100ENSRROG00000043108RBMS19992.147Rhinopithecus_roxellana
ENSPCAG00000009673RBMS19489.147ENSSBOG00000034705RBMS19989.147Saimiri_boliviensis_boliviensis
ENSPCAG00000009673RBMS110088.177ENSSHAG00000012271RBMS110088.177Sarcophilus_harrisii
ENSPCAG00000009673RBMS18775.284ENSSFOG00015014493rbms1a9575.284Scleropages_formosus
ENSPCAG00000009673RBMS19976.238ENSSFOG00015022929rbms19976.238Scleropages_formosus
ENSPCAG00000009673RBMS18770.822ENSSMAG00000012152RBMS18079.667Scophthalmus_maximus
ENSPCAG00000009673RBMS18262.048ENSSMAG00000012722rbms1a8368.896Scophthalmus_maximus
ENSPCAG00000009673RBMS19372.340ENSSDUG00000018803RBMS19472.340Seriola_dumerili
ENSPCAG00000009673RBMS17868.571ENSSDUG00000020602rbms1a8369.565Seriola_dumerili
ENSPCAG00000009673RBMS17868.571ENSSLDG00000009495rbms1a8269.565Seriola_lalandi_dorsalis
ENSPCAG00000009673RBMS19372.074ENSSLDG00000016556RBMS19472.074Seriola_lalandi_dorsalis
ENSPCAG00000009673RBMS110075.616ENSSARG00000011085RBMS110075.616Sorex_araneus
ENSPCAG00000009673RBMS18786.932ENSSPUG00000017163RBMS19486.932Sphenodon_punctatus
ENSPCAG00000009673RBMS17868.254ENSSPAG00000005371rbms1a7869.231Stegastes_partitus
ENSPCAG00000009673RBMS19373.138ENSSPAG00000000059RBMS19473.138Stegastes_partitus
ENSPCAG00000009673RBMS110088.152ENSSSCG00000015888RBMS110088.152Sus_scrofa
ENSPCAG00000009673RBMS110087.192ENSTGUG00000006606RBMS110087.192Taeniopygia_guttata
ENSPCAG00000009673RBMS18769.972ENSTRUG00000005466-9668.135Takifugu_rubripes
ENSPCAG00000009673RBMS17368.013ENSTRUG00000017155rbms1a8067.559Takifugu_rubripes
ENSPCAG00000009673RBMS17964.688ENSTNIG00000009477rbms1a9164.214Tetraodon_nigroviridis
ENSPCAG00000009673RBMS19369.496ENSTNIG00000016496RBMS19771.307Tetraodon_nigroviridis
ENSPCAG00000009673RBMS19480.577ENSTBEG00000016156RBMS110080.577Tupaia_belangeri
ENSPCAG00000009673RBMS19491.864ENSTTRG00000011058RBMS110091.864Tursiops_truncatus
ENSPCAG00000009673RBMS110091.133ENSUAMG00000022331RBMS110091.133Ursus_americanus
ENSPCAG00000009673RBMS19490.339ENSUMAG00000008605RBMS19890.339Ursus_maritimus
ENSPCAG00000009673RBMS18797.458ENSVPAG00000002716RBMS19397.458Vicugna_pacos
ENSPCAG00000009673RBMS110087.915ENSVVUG00000018682RBMS110087.915Vulpes_vulpes
ENSPCAG00000009673RBMS19477.807ENSXETG00000016204rbms110077.023Xenopus_tropicalis
ENSPCAG00000009673RBMS18769.886ENSXCOG00000000211RBMS19569.886Xiphophorus_couchianus
ENSPCAG00000009673RBMS17868.254ENSXCOG00000001659rbms1a8169.231Xiphophorus_couchianus
ENSPCAG00000009673RBMS17868.254ENSXMAG00000001802rbms1a8169.231Xiphophorus_maculatus
ENSPCAG00000009673RBMS19370.213ENSXMAG00000011405RBMS19470.213Xiphophorus_maculatus

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