EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000009998 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 63367 bases
Position: chrGeneScaffold_3807:11602-74968
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000009415	RRM_1	PF00076.22	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010084	SCAF4-201	3369	-	ENSPCAP00000009415	1122 (aa)	-	UPI00018AF083

Gene Model

Click here to download ENSPCAG00000009998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000009998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000009998	SCAF4	68	84.724	ENSAMEG00000014987	SCAF4	92	86.136	Ailuropoda_melanoleuca
ENSPCAG00000009998	SCAF4	99	70.246	ENSAPLG00000002509	SCAF4	89	88.448	Anas_platyrhynchos
ENSPCAG00000009998	SCAF4	94	79.038	ENSACAG00000002569	SCAF4	66	87.742	Anolis_carolinensis
ENSPCAG00000009998	SCAF4	93	49.093	ENSAMXG00000008585	scaf4a	55	68.581	Astyanax_mexicanus
ENSPCAG00000009998	SCAF4	100	80.209	ENSBTAG00000018855	SCAF4	100	81.779	Bos_taurus
ENSPCAG00000009998	SCAF4	99	81.377	ENSCAFG00000008863	SCAF4	99	83.495	Canis_familiaris
ENSPCAG00000009998	SCAF4	99	79.167	ENSCAFG00020026019	SCAF4	100	81.764	Canis_lupus_dingo
ENSPCAG00000009998	SCAF4	100	80.279	ENSCHIG00000008385	SCAF4	100	82.183	Capra_hircus
ENSPCAG00000009998	SCAF4	85	93.704	ENSTSYG00000011344	SCAF4	91	93.704	Carlito_syrichta
ENSPCAG00000009998	SCAF4	93	86.620	ENSCPOG00000012443	SCAF4	93	93.214	Cavia_porcellus
ENSPCAG00000009998	SCAF4	92	94.757	ENSCATG00000030379	SCAF4	94	94.118	Cercocebus_atys
ENSPCAG00000009998	SCAF4	87	93.284	ENSCLAG00000006298	SCAF4	92	93.609	Chinchilla_lanigera
ENSPCAG00000009998	SCAF4	93	77.128	ENSCGRG00001020821	Scaf4	93	82.275	Cricetulus_griseus_chok1gshd
ENSPCAG00000009998	SCAF4	93	77.137	ENSCGRG00000014360	Scaf4	93	80.851	Cricetulus_griseus_crigri
ENSPCAG00000009998	SCAF4	68	83.715	ENSDNOG00000019014	SCAF4	94	80.769	Dasypus_novemcinctus
ENSPCAG00000009998	SCAF4	86	79.433	ENSETEG00000000583	SCAF4	90	81.445	Echinops_telfairi
ENSPCAG00000009998	SCAF4	68	82.890	ENSEASG00005007756	SCAF4	100	83.770	Equus_asinus_asinus
ENSPCAG00000009998	SCAF4	68	82.614	ENSECAG00000014248	SCAF4	100	83.522	Equus_caballus
ENSPCAG00000009998	SCAF4	59	50.993	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSPCAG00000009998	SCAF4	68	83.014	ENSFCAG00000002228	SCAF4	100	83.990	Felis_catus
ENSPCAG00000009998	SCAF4	92	88.278	ENSGALG00000033965	SCAF4	89	88.214	Gallus_gallus
ENSPCAG00000009998	SCAF4	93	93.214	ENSHGLG00000010582	SCAF4	92	93.214	Heterocephalus_glaber_female
ENSPCAG00000009998	SCAF4	92	93.985	ENSHGLG00100009441	SCAF4	92	93.985	Heterocephalus_glaber_male
ENSPCAG00000009998	SCAF4	92	82.316	ENSSTOG00000004450	SCAF4	92	83.588	Ictidomys_tridecemlineatus
ENSPCAG00000009998	SCAF4	92	89.338	ENSJJAG00000019447	Scaf4	94	89.259	Jaculus_jaculus
ENSPCAG00000009998	SCAF4	90	73.256	ENSLACG00000013913	SCAF4	52	75.781	Latimeria_chalumnae
ENSPCAG00000009998	SCAF4	99	54.443	ENSLOCG00000009162	scaf4a	88	74.216	Lepisosteus_oculatus
ENSPCAG00000009998	SCAF4	93	91.071	ENSLAFG00000010710	SCAF4	95	91.398	Loxodonta_africana
ENSPCAG00000009998	SCAF4	93	88.364	ENSMGAG00000014515	SCAF4	89	88.930	Meleagris_gallopavo
ENSPCAG00000009998	SCAF4	99	78.477	ENSMAUG00000013307	Scaf4	69	82.270	Mesocricetus_auratus
ENSPCAG00000009998	SCAF4	92	93.333	ENSMICG00000005256	SCAF4	95	93.333	Microcebus_murinus
ENSPCAG00000009998	SCAF4	100	72.607	ENSMOCG00000012087	Scaf4	99	76.228	Microtus_ochrogaster
ENSPCAG00000009998	SCAF4	100	75.862	ENSMODG00000021040	SCAF4	96	89.286	Monodelphis_domestica
ENSPCAG00000009998	SCAF4	100	71.895	MGP_CAROLIEiJ_G0020944	Scaf4	92	82.011	Mus_caroli
ENSPCAG00000009998	SCAF4	100	70.270	ENSMUSG00000022983	Scaf4	92	82.713	Mus_musculus
ENSPCAG00000009998	SCAF4	100	71.080	MGP_PahariEiJ_G0016649	Scaf4	92	79.477	Mus_pahari
ENSPCAG00000009998	SCAF4	100	72.131	MGP_SPRETEiJ_G0021850	Scaf4	93	82.493	Mus_spretus
ENSPCAG00000009998	SCAF4	93	87.189	ENSMLUG00000011472	SCAF4	99	72.612	Myotis_lucifugus
ENSPCAG00000009998	SCAF4	99	79.068	ENSNGAG00000005214	Scaf4	69	82.911	Nannospalax_galili
ENSPCAG00000009998	SCAF4	64	93.333	ENSOPRG00000007016	SCAF4	77	86.740	Ochotona_princeps
ENSPCAG00000009998	SCAF4	93	86.926	ENSODEG00000002718	SCAF4	92	86.786	Octodon_degus
ENSPCAG00000009998	SCAF4	95	84.113	ENSOCUG00000008336	SCAF4	100	78.874	Oryctolagus_cuniculus
ENSPCAG00000009998	SCAF4	99	79.049	ENSOARG00000013894	SCAF4	91	93.040	Ovis_aries
ENSPCAG00000009998	SCAF4	68	82.886	ENSPPRG00000000635	SCAF4	100	83.834	Panthera_pardus
ENSPCAG00000009998	SCAF4	99	78.609	ENSPTIG00000021578	SCAF4	93	93.985	Panthera_tigris_altaica
ENSPCAG00000009998	SCAF4	87	94.757	ENSPANG00000017332	SCAF4	93	94.118	Papio_anubis
ENSPCAG00000009998	SCAF4	66	60.686	ENSPKIG00000022408	scaf4a	62	78.528	Paramormyrops_kingsleyae
ENSPCAG00000009998	SCAF4	99	71.111	ENSPSIG00000014242	SCAF4	89	88.519	Pelodiscus_sinensis
ENSPCAG00000009998	SCAF4	92	80.714	ENSPCIG00000028183	SCAF4	87	89.299	Phascolarctos_cinereus
ENSPCAG00000009998	SCAF4	92	92.963	ENSPCOG00000018710	SCAF4	94	92.963	Propithecus_coquereli
ENSPCAG00000009998	SCAF4	100	81.452	ENSPVAG00000005220	SCAF4	100	82.765	Pteropus_vampyrus
ENSPCAG00000009998	SCAF4	93	82.609	ENSRNOG00000002104	Scaf4	92	74.599	Rattus_norvegicus
ENSPCAG00000009998	SCAF4	94	84.454	ENSRBIG00000040007	SCAF4	82	93.750	Rhinopithecus_bieti
ENSPCAG00000009998	SCAF4	100	76.991	ENSSHAG00000001581	SCAF4	96	87.500	Sarcophilus_harrisii
ENSPCAG00000009998	SCAF4	75	52.256	ENSSFOG00015006338	scaf4a	61	75.610	Scleropages_formosus
ENSPCAG00000009998	SCAF4	51	60.073	ENSSMAG00000003738	scaf4b	55	72.222	Scophthalmus_maximus
ENSPCAG00000009998	SCAF4	100	77.288	ENSSSCG00000021023	SCAF4	100	79.534	Sus_scrofa
ENSPCAG00000009998	SCAF4	82	89.338	ENSTGUG00000013464	SCAF4	83	89.630	Taeniopygia_guttata
ENSPCAG00000009998	SCAF4	51	58.824	ENSTRUG00000009536	-	65	58.672	Takifugu_rubripes
ENSPCAG00000009998	SCAF4	99	77.173	ENSTTRG00000010963	SCAF4	100	82.187	Tursiops_truncatus
ENSPCAG00000009998	SCAF4	92	95.113	ENSUMAG00000016962	SCAF4	83	95.113	Ursus_maritimus
ENSPCAG00000009998	SCAF4	99	81.472	ENSVVUG00000002953	SCAF4	100	83.599	Vulpes_vulpes
ENSPCAG00000009998	SCAF4	94	73.986	ENSXETG00000007351	scaf4	66	76.868	Xenopus_tropicalis