EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000010276 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 6389 bases
Position: chrGeneScaffold_3554:6458-12846
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000009585	RRM_1	PF00076.22	1.7e-17	1	1
ENSPCAP00000009585	RRM_3	PF08777.11	4.6e-29	1	1
ENSPCAP00000009585	La	PF05383.17	5.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010270	SSB-201	1128	-	ENSPCAP00000009585	375 (aa)	-	UPI00018ADAC5

Gene Model

Click here to download ENSPCAG00000010276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000010276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000010276	SSB	100	89.119	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSPCAG00000010276	SSB	99	54.167	ENSAPOG00000003448	ssb	95	54.167	Acanthochromis_polyacanthus
ENSPCAG00000010276	SSB	100	85.678	ENSAMEG00000010507	SSB	95	85.427	Ailuropoda_melanoleuca
ENSPCAG00000010276	SSB	91	56.534	ENSACIG00000001738	ssb	92	56.657	Amphilophus_citrinellus
ENSPCAG00000010276	SSB	99	54.427	ENSAOCG00000020398	ssb	95	54.688	Amphiprion_ocellaris
ENSPCAG00000010276	SSB	99	54.948	ENSAPEG00000020395	ssb	95	55.208	Amphiprion_percula
ENSPCAG00000010276	SSB	99	55.990	ENSATEG00000016884	ssb	95	56.250	Anabas_testudineus
ENSPCAG00000010276	SSB	100	67.413	ENSAPLG00000006109	SSB	95	68.657	Anas_platyrhynchos
ENSPCAG00000010276	SSB	100	65.206	ENSACAG00000017008	SSB	94	64.175	Anolis_carolinensis
ENSPCAG00000010276	SSB	100	80.679	ENSANAG00000027195	-	94	79.112	Aotus_nancymaae
ENSPCAG00000010276	SSB	99	53.141	ENSACLG00000010798	ssb	95	52.880	Astatotilapia_calliptera
ENSPCAG00000010276	SSB	99	53.846	ENSAMXG00000012606	ssb	95	54.103	Astyanax_mexicanus
ENSPCAG00000010276	SSB	100	88.773	ENSBTAG00000008716	SSB	95	88.773	Bos_taurus
ENSPCAG00000010276	SSB	75	34.354	WBGene00016653	C44E4.4	74	35.154	Caenorhabditis_elegans
ENSPCAG00000010276	SSB	100	89.034	ENSCJAG00000045073	SSB	95	89.034	Callithrix_jacchus
ENSPCAG00000010276	SSB	100	88.802	ENSCAFG00000012418	SSB	95	88.802	Canis_familiaris
ENSPCAG00000010276	SSB	100	88.802	ENSCAFG00020002900	SSB	95	88.802	Canis_lupus_dingo
ENSPCAG00000010276	SSB	100	83.947	ENSCHIG00000022196	-	94	83.947	Capra_hircus
ENSPCAG00000010276	SSB	100	88.773	ENSCHIG00000022624	-	95	88.773	Capra_hircus
ENSPCAG00000010276	SSB	100	89.295	ENSTSYG00000000097	SSB	95	89.295	Carlito_syrichta
ENSPCAG00000010276	SSB	100	90.862	ENSCPOG00000003338	SSB	95	90.862	Cavia_porcellus
ENSPCAG00000010276	SSB	100	89.556	ENSCCAG00000035147	SSB	95	89.556	Cebus_capucinus
ENSPCAG00000010276	SSB	75	86.552	ENSCATG00000036701	SSB	84	86.552	Cercocebus_atys
ENSPCAG00000010276	SSB	100	67.200	ENSCATG00000042909	-	93	67.200	Cercocebus_atys
ENSPCAG00000010276	SSB	100	90.339	ENSCLAG00000015617	-	95	90.339	Chinchilla_lanigera
ENSPCAG00000010276	SSB	98	81.600	ENSCSAG00000018390	-	94	81.600	Chlorocebus_sabaeus
ENSPCAG00000010276	SSB	100	89.556	ENSCSAG00000015200	SSB	84	89.556	Chlorocebus_sabaeus
ENSPCAG00000010276	SSB	100	89.556	ENSCHOG00000007763	SSB	95	89.556	Choloepus_hoffmanni
ENSPCAG00000010276	SSB	100	75.969	ENSCPBG00000006519	SSB	95	77.003	Chrysemys_picta_bellii
ENSPCAG00000010276	SSB	100	74.674	ENSCANG00000033240	-	94	74.674	Colobus_angolensis_palliatus
ENSPCAG00000010276	SSB	100	89.817	ENSCANG00000027695	SSB	95	89.817	Colobus_angolensis_palliatus
ENSPCAG00000010276	SSB	98	68.435	ENSCANG00000028838	-	89	68.435	Colobus_angolensis_palliatus
ENSPCAG00000010276	SSB	100	74.935	ENSCGRG00001024831	Ssb	95	74.935	Cricetulus_griseus_chok1gshd
ENSPCAG00000010276	SSB	100	74.935	ENSCGRG00000005387	Ssb	95	74.935	Cricetulus_griseus_crigri
ENSPCAG00000010276	SSB	99	55.729	ENSCSEG00000011599	ssb	95	56.250	Cynoglossus_semilaevis
ENSPCAG00000010276	SSB	99	56.364	ENSCVAG00000021558	ssb	95	56.623	Cyprinodon_variegatus
ENSPCAG00000010276	SSB	99	54.805	ENSDARG00000029252	ssb	95	54.805	Danio_rerio
ENSPCAG00000010276	SSB	100	90.078	ENSDNOG00000013450	SSB	95	90.078	Dasypus_novemcinctus
ENSPCAG00000010276	SSB	100	81.627	ENSDORG00000005543	Ssb	94	80.840	Dipodomys_ordii
ENSPCAG00000010276	SSB	86	34.036	FBgn0011638	La	64	38.550	Drosophila_melanogaster
ENSPCAG00000010276	SSB	63	94.030	ENSETEG00000004614	-	61	94.030	Echinops_telfairi
ENSPCAG00000010276	SSB	98	47.340	ENSEBUG00000001237	ssb	92	47.340	Eptatretus_burgeri
ENSPCAG00000010276	SSB	100	89.556	ENSEASG00005022835	SSB	95	89.556	Equus_asinus_asinus
ENSPCAG00000010276	SSB	100	89.817	ENSECAG00000018495	SSB	95	89.817	Equus_caballus
ENSPCAG00000010276	SSB	81	81.481	ENSEEUG00000008077	SSB	79	81.481	Erinaceus_europaeus
ENSPCAG00000010276	SSB	99	56.218	ENSELUG00000020929	ssb	95	56.477	Esox_lucius
ENSPCAG00000010276	SSB	100	89.062	ENSFCAG00000011601	SSB	95	89.062	Felis_catus
ENSPCAG00000010276	SSB	100	72.610	ENSFALG00000000930	SSB	95	72.610	Ficedula_albicollis
ENSPCAG00000010276	SSB	100	90.339	ENSFDAG00000000598	SSB	95	90.339	Fukomys_damarensis
ENSPCAG00000010276	SSB	76	51.505	ENSFHEG00000003268	ssb	95	52.288	Fundulus_heteroclitus
ENSPCAG00000010276	SSB	99	53.827	ENSGMOG00000002664	ssb	96	52.564	Gadus_morhua
ENSPCAG00000010276	SSB	100	71.762	ENSGALG00000009677	SSB	95	70.984	Gallus_gallus
ENSPCAG00000010276	SSB	99	54.688	ENSGAFG00000002749	ssb	95	54.688	Gambusia_affinis
ENSPCAG00000010276	SSB	99	52.821	ENSGACG00000005107	ssb	95	52.564	Gasterosteus_aculeatus
ENSPCAG00000010276	SSB	100	75.711	ENSGAGG00000007807	SSB	95	76.744	Gopherus_agassizii
ENSPCAG00000010276	SSB	57	81.778	ENSGGOG00000023471	-	92	81.778	Gorilla_gorilla
ENSPCAG00000010276	SSB	99	72.775	ENSGGOG00000024891	-	94	72.775	Gorilla_gorilla
ENSPCAG00000010276	SSB	99	52.880	ENSHBUG00000006584	ssb	95	52.618	Haplochromis_burtoni
ENSPCAG00000010276	SSB	100	89.231	ENSHGLG00000017580	-	95	87.436	Heterocephalus_glaber_female
ENSPCAG00000010276	SSB	100	82.857	ENSHGLG00000004478	-	94	82.078	Heterocephalus_glaber_female
ENSPCAG00000010276	SSB	100	81.723	ENSHGLG00000005832	-	94	81.723	Heterocephalus_glaber_female
ENSPCAG00000010276	SSB	100	77.023	ENSHGLG00100008767	-	94	77.023	Heterocephalus_glaber_male
ENSPCAG00000010276	SSB	100	89.231	ENSHGLG00100003084	-	95	87.436	Heterocephalus_glaber_male
ENSPCAG00000010276	SSB	99	53.927	ENSHCOG00000019011	ssb	96	53.927	Hippocampus_comes
ENSPCAG00000010276	SSB	99	56.041	ENSIPUG00000003681	SSB	95	56.041	Ictalurus_punctatus
ENSPCAG00000010276	SSB	100	90.862	ENSSTOG00000008416	SSB	95	90.862	Ictidomys_tridecemlineatus
ENSPCAG00000010276	SSB	100	75.561	ENSJJAG00000023158	-	95	73.317	Jaculus_jaculus
ENSPCAG00000010276	SSB	93	68.627	ENSJJAG00000016250	-	94	68.627	Jaculus_jaculus
ENSPCAG00000010276	SSB	99	55.990	ENSKMAG00000017317	ssb	95	55.729	Kryptolebias_marmoratus
ENSPCAG00000010276	SSB	99	53.385	ENSLBEG00000017345	ssb	95	53.906	Labrus_bergylta
ENSPCAG00000010276	SSB	99	65.195	ENSLACG00000014056	SSB	94	65.714	Latimeria_chalumnae
ENSPCAG00000010276	SSB	99	64.675	ENSLOCG00000007933	ssb	95	64.675	Lepisosteus_oculatus
ENSPCAG00000010276	SSB	100	86.750	ENSLAFG00000000867	-	95	88.500	Loxodonta_africana
ENSPCAG00000010276	SSB	100	79.896	ENSLAFG00000028909	-	94	79.634	Loxodonta_africana
ENSPCAG00000010276	SSB	73	67.616	ENSLAFG00000026721	-	92	67.616	Loxodonta_africana
ENSPCAG00000010276	SSB	100	89.556	ENSMFAG00000039066	SSB	95	89.556	Macaca_fascicularis
ENSPCAG00000010276	SSB	87	75.821	ENSMFAG00000041478	-	93	75.821	Macaca_fascicularis
ENSPCAG00000010276	SSB	100	62.667	ENSMMUG00000039889	-	94	62.933	Macaca_mulatta
ENSPCAG00000010276	SSB	100	89.556	ENSMMUG00000023051	SSB	95	89.556	Macaca_mulatta
ENSPCAG00000010276	SSB	100	74.674	ENSMMUG00000011724	-	92	74.674	Macaca_mulatta
ENSPCAG00000010276	SSB	87	75.821	ENSMNEG00000034698	-	93	75.821	Macaca_nemestrina
ENSPCAG00000010276	SSB	100	81.053	ENSMNEG00000028321	SSB	94	81.579	Macaca_nemestrina
ENSPCAG00000010276	SSB	100	61.619	ENSMLEG00000042644	-	93	61.619	Mandrillus_leucophaeus
ENSPCAG00000010276	SSB	100	89.556	ENSMLEG00000035717	SSB	95	89.556	Mandrillus_leucophaeus
ENSPCAG00000010276	SSB	99	56.510	ENSMAMG00000004800	ssb	95	56.771	Mastacembelus_armatus
ENSPCAG00000010276	SSB	99	53.141	ENSMZEG00005005749	ssb	95	52.880	Maylandia_zebra
ENSPCAG00000010276	SSB	100	71.762	ENSMGAG00000010328	SSB	95	70.984	Meleagris_gallopavo
ENSPCAG00000010276	SSB	98	81.867	ENSMICG00000033304	-	91	81.867	Microcebus_murinus
ENSPCAG00000010276	SSB	99	90.026	ENSMICG00000028252	-	94	90.026	Microcebus_murinus
ENSPCAG00000010276	SSB	100	66.133	ENSMODG00000019271	-	94	66.400	Monodelphis_domestica
ENSPCAG00000010276	SSB	99	64.000	ENSMODG00000007027	-	93	64.000	Monodelphis_domestica
ENSPCAG00000010276	SSB	100	78.036	ENSMODG00000008227	-	95	78.811	Monodelphis_domestica
ENSPCAG00000010276	SSB	89	55.162	ENSMALG00000008045	ssb	86	56.620	Monopterus_albus
ENSPCAG00000010276	SSB	100	74.121	MGP_CAROLIEiJ_G0023629	-	88	90.741	Mus_caroli
ENSPCAG00000010276	SSB	100	73.618	ENSMUSG00000068882	Ssb	88	90.741	Mus_musculus
ENSPCAG00000010276	SSB	100	73.367	MGP_PahariEiJ_G0025081	-	88	90.741	Mus_pahari
ENSPCAG00000010276	SSB	100	73.618	MGP_SPRETEiJ_G0024551	Ssb	88	90.741	Mus_spretus
ENSPCAG00000010276	SSB	100	89.295	ENSMPUG00000000785	SSB	95	89.295	Mustela_putorius_furo
ENSPCAG00000010276	SSB	100	85.176	ENSMLUG00000016316	SSB	95	84.673	Myotis_lucifugus
ENSPCAG00000010276	SSB	99	53.403	ENSNBRG00000012661	ssb	95	53.141	Neolamprologus_brichardi
ENSPCAG00000010276	SSB	100	64.628	ENSNLEG00000028754	-	94	65.344	Nomascus_leucogenys
ENSPCAG00000010276	SSB	100	89.817	ENSNLEG00000004958	SSB	95	89.817	Nomascus_leucogenys
ENSPCAG00000010276	SSB	64	82.661	ENSMEUG00000001650	-	100	82.661	Notamacropus_eugenii
ENSPCAG00000010276	SSB	75	67.586	ENSOPRG00000008475	-	78	88.387	Ochotona_princeps
ENSPCAG00000010276	SSB	99	83.598	ENSODEG00000004202	-	100	82.540	Octodon_degus
ENSPCAG00000010276	SSB	99	52.618	ENSONIG00000008776	ssb	95	52.880	Oreochromis_niloticus
ENSPCAG00000010276	SSB	100	79.112	ENSOANG00000008543	SSB	95	80.157	Ornithorhynchus_anatinus
ENSPCAG00000010276	SSB	100	89.556	ENSOCUG00000010396	SSB	95	89.556	Oryctolagus_cuniculus
ENSPCAG00000010276	SSB	99	56.250	ENSORLG00000017208	ssb	95	56.250	Oryzias_latipes
ENSPCAG00000010276	SSB	99	55.729	ENSORLG00020022574	ssb	95	55.729	Oryzias_latipes_hni
ENSPCAG00000010276	SSB	99	55.729	ENSORLG00015016592	ssb	95	55.729	Oryzias_latipes_hsok
ENSPCAG00000010276	SSB	99	56.397	ENSOMEG00000003193	ssb	95	56.397	Oryzias_melastigma
ENSPCAG00000010276	SSB	100	83.750	ENSOGAG00000029768	SSB	95	82.500	Otolemur_garnettii
ENSPCAG00000010276	SSB	100	88.251	ENSOARG00000002906	SSB	95	88.251	Ovis_aries
ENSPCAG00000010276	SSB	100	89.119	ENSPPAG00000042673	SSB	95	89.119	Pan_paniscus
ENSPCAG00000010276	SSB	97	73.913	ENSPPAG00000006189	-	96	73.641	Pan_paniscus
ENSPCAG00000010276	SSB	100	71.540	ENSPPAG00000032427	-	82	85.047	Pan_paniscus
ENSPCAG00000010276	SSB	100	89.062	ENSPPRG00000006599	SSB	95	89.062	Panthera_pardus
ENSPCAG00000010276	SSB	100	88.802	ENSPTIG00000011021	SSB	92	88.802	Panthera_tigris_altaica
ENSPCAG00000010276	SSB	100	71.733	ENSPTRG00000042880	-	94	71.733	Pan_troglodytes
ENSPCAG00000010276	SSB	100	89.119	ENSPTRG00000012620	SSB	95	89.119	Pan_troglodytes
ENSPCAG00000010276	SSB	100	64.362	ENSPANG00000034126	-	93	64.894	Papio_anubis
ENSPCAG00000010276	SSB	100	89.556	ENSPANG00000007440	SSB	95	89.556	Papio_anubis
ENSPCAG00000010276	SSB	98	59.947	ENSPANG00000031877	-	89	58.355	Papio_anubis
ENSPCAG00000010276	SSB	99	60.574	ENSPKIG00000019325	ssb	95	60.836	Paramormyrops_kingsleyae
ENSPCAG00000010276	SSB	100	72.868	ENSPSIG00000002265	SSB	88	73.902	Pelodiscus_sinensis
ENSPCAG00000010276	SSB	89	51.724	ENSPMGG00000020075	ssb	92	52.011	Periophthalmus_magnuspinnatus
ENSPCAG00000010276	SSB	98	44.554	ENSPMAG00000002982	ssb	95	44.963	Petromyzon_marinus
ENSPCAG00000010276	SSB	100	79.167	ENSPCIG00000028591	-	95	79.167	Phascolarctos_cinereus
ENSPCAG00000010276	SSB	99	56.250	ENSPFOG00000009650	ssb	95	55.729	Poecilia_formosa
ENSPCAG00000010276	SSB	99	55.729	ENSPLAG00000020498	ssb	95	55.729	Poecilia_latipinna
ENSPCAG00000010276	SSB	99	54.948	ENSPMEG00000001051	ssb	95	55.208	Poecilia_mexicana
ENSPCAG00000010276	SSB	93	55.801	ENSPREG00000003708	ssb	95	55.801	Poecilia_reticulata
ENSPCAG00000010276	SSB	100	89.817	ENSPPYG00000012919	SSB	95	89.817	Pongo_abelii
ENSPCAG00000010276	SSB	100	77.546	ENSPCOG00000023189	-	94	77.546	Propithecus_coquereli
ENSPCAG00000010276	SSB	100	86.423	ENSPCOG00000015741	-	95	86.423	Propithecus_coquereli
ENSPCAG00000010276	SSB	92	88.983	ENSPVAG00000006615	SSB	100	85.311	Pteropus_vampyrus
ENSPCAG00000010276	SSB	99	53.141	ENSPNYG00000006444	ssb	95	52.880	Pundamilia_nyererei
ENSPCAG00000010276	SSB	99	54.124	ENSPNAG00000011708	ssb	95	55.243	Pygocentrus_nattereri
ENSPCAG00000010276	SSB	100	74.121	ENSRNOG00000007998	Ssb	95	72.864	Rattus_norvegicus
ENSPCAG00000010276	SSB	100	74.545	ENSRNOG00000011606	AABR07061825.1	95	73.506	Rattus_norvegicus
ENSPCAG00000010276	SSB	99	74.670	ENSRBIG00000041232	-	98	74.670	Rhinopithecus_bieti
ENSPCAG00000010276	SSB	100	75.853	ENSRBIG00000041972	SSB	94	76.579	Rhinopithecus_bieti
ENSPCAG00000010276	SSB	94	82.044	ENSRBIG00000041608	-	98	79.006	Rhinopithecus_bieti
ENSPCAG00000010276	SSB	100	62.760	ENSRBIG00000029918	-	93	62.760	Rhinopithecus_bieti
ENSPCAG00000010276	SSB	100	89.817	ENSRROG00000040346	SSB	95	89.817	Rhinopithecus_roxellana
ENSPCAG00000010276	SSB	100	75.196	ENSRROG00000031684	-	96	75.196	Rhinopithecus_roxellana
ENSPCAG00000010276	SSB	94	85.635	ENSRROG00000034102	-	94	82.078	Rhinopithecus_roxellana
ENSPCAG00000010276	SSB	100	72.656	ENSRROG00000007149	-	94	72.656	Rhinopithecus_roxellana
ENSPCAG00000010276	SSB	100	89.817	ENSSBOG00000027204	SSB	95	89.817	Saimiri_boliviensis_boliviensis
ENSPCAG00000010276	SSB	100	78.906	ENSSHAG00000018062	SSB	95	78.906	Sarcophilus_harrisii
ENSPCAG00000010276	SSB	99	62.371	ENSSFOG00015000550	ssb	95	62.371	Scleropages_formosus
ENSPCAG00000010276	SSB	99	53.743	ENSSMAG00000013885	ssb	94	55.966	Scophthalmus_maximus
ENSPCAG00000010276	SSB	99	55.469	ENSSDUG00000020117	ssb	95	55.469	Seriola_dumerili
ENSPCAG00000010276	SSB	99	54.813	ENSSLDG00000002525	ssb	95	54.813	Seriola_lalandi_dorsalis
ENSPCAG00000010276	SSB	100	79.373	ENSSARG00000007747	SSB	100	79.373	Sorex_araneus
ENSPCAG00000010276	SSB	100	73.506	ENSSPUG00000012112	SSB	95	73.506	Sphenodon_punctatus
ENSPCAG00000010276	SSB	99	54.948	ENSSPAG00000005696	ssb	95	55.208	Stegastes_partitus
ENSPCAG00000010276	SSB	98	74.133	ENSSSCG00000015938	SSB	93	74.133	Sus_scrofa
ENSPCAG00000010276	SSB	100	72.351	ENSTGUG00000007942	SSB	95	72.351	Taeniopygia_guttata
ENSPCAG00000010276	SSB	99	54.974	ENSTRUG00000017839	ssb	95	54.974	Takifugu_rubripes
ENSPCAG00000010276	SSB	90	57.225	ENSTNIG00000000915	ssb	94	55.491	Tetraodon_nigroviridis
ENSPCAG00000010276	SSB	81	98.925	ENSTBEG00000009056	SSB	76	98.925	Tupaia_belangeri
ENSPCAG00000010276	SSB	100	88.021	ENSTTRG00000002152	SSB	95	88.021	Tursiops_truncatus
ENSPCAG00000010276	SSB	93	90.423	ENSUAMG00000027833	SSB	93	90.423	Ursus_americanus
ENSPCAG00000010276	SSB	100	89.583	ENSUMAG00000013907	SSB	95	89.583	Ursus_maritimus
ENSPCAG00000010276	SSB	100	87.990	ENSVPAG00000007183	SSB	95	87.990	Vicugna_pacos
ENSPCAG00000010276	SSB	100	88.802	ENSVVUG00000016573	SSB	73	88.802	Vulpes_vulpes
ENSPCAG00000010276	SSB	100	55.665	ENSXETG00000025402	ssb	95	55.665	Xenopus_tropicalis
ENSPCAG00000010276	SSB	93	54.775	ENSXCOG00000019109	ssb	94	54.775	Xiphophorus_couchianus
ENSPCAG00000010276	SSB	99	54.948	ENSXMAG00000004888	ssb	95	54.948	Xiphophorus_maculatus