EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000010376 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 1803 bases
Position: chrGeneScaffold_1252:153432-155234
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000009638	Exo_endo_phos	PF03372.23	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010328	APEX1-201	954	-	ENSPCAP00000009638	317 (aa)	-	UPI00018B031A

Gene Model

Click here to download ENSPCAG00000010376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000010376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000010376	APEX1	100	92.138	ENSG00000100823	APEX1	100	92.138	Homo_sapiens
ENSPCAG00000010376	APEX1	88	67.742	ENSAPOG00000017002	apex1	98	64.548	Acanthochromis_polyacanthus
ENSPCAG00000010376	APEX1	100	92.138	ENSAMEG00000005418	APEX1	100	92.138	Ailuropoda_melanoleuca
ENSPCAG00000010376	APEX1	87	69.424	ENSACIG00000010653	apex1	97	68.166	Amphilophus_citrinellus
ENSPCAG00000010376	APEX1	88	67.742	ENSAOCG00000009649	apex1	94	66.207	Amphiprion_ocellaris
ENSPCAG00000010376	APEX1	88	67.742	ENSAPEG00000021453	apex1	94	66.207	Amphiprion_percula
ENSPCAG00000010376	APEX1	99	64.762	ENSATEG00000002883	apex1	97	65.506	Anabas_testudineus
ENSPCAG00000010376	APEX1	100	68.323	ENSACAG00000008099	APEX1	100	68.323	Anolis_carolinensis
ENSPCAG00000010376	APEX1	100	93.082	ENSANAG00000030117	APEX1	100	93.082	Aotus_nancymaae
ENSPCAG00000010376	APEX1	86	70.182	ENSACLG00000018441	apex1	99	65.300	Astatotilapia_calliptera
ENSPCAG00000010376	APEX1	100	64.375	ENSAMXG00000034699	apex1	100	64.375	Astyanax_mexicanus
ENSPCAG00000010376	APEX1	100	90.566	ENSBTAG00000002745	APEX1	100	90.566	Bos_taurus
ENSPCAG00000010376	APEX1	80	42.969	WBGene00001372	exo-3	88	42.969	Caenorhabditis_elegans
ENSPCAG00000010376	APEX1	100	93.082	ENSCJAG00000009726	APEX1	100	93.082	Callithrix_jacchus
ENSPCAG00000010376	APEX1	100	91.195	ENSCAFG00000032033	APEX1	100	91.195	Canis_familiaris
ENSPCAG00000010376	APEX1	100	91.195	ENSCAFG00020014377	-	100	91.195	Canis_lupus_dingo
ENSPCAG00000010376	APEX1	54	88.953	ENSCAFG00020023002	-	96	88.953	Canis_lupus_dingo
ENSPCAG00000010376	APEX1	100	90.566	ENSCHIG00000007298	-	100	90.566	Capra_hircus
ENSPCAG00000010376	APEX1	98	71.795	ENSCHIG00000014537	-	99	71.795	Capra_hircus
ENSPCAG00000010376	APEX1	100	90.566	ENSTSYG00000034813	APEX1	100	90.566	Carlito_syrichta
ENSPCAG00000010376	APEX1	85	84.133	ENSCAPG00000016235	APEX1	91	92.797	Cavia_aperea
ENSPCAG00000010376	APEX1	100	91.195	ENSCPOG00000030909	APEX1	100	91.195	Cavia_porcellus
ENSPCAG00000010376	APEX1	100	80.818	ENSCCAG00000031931	-	100	80.818	Cebus_capucinus
ENSPCAG00000010376	APEX1	100	93.082	ENSCCAG00000033056	-	100	93.082	Cebus_capucinus
ENSPCAG00000010376	APEX1	100	92.453	ENSCATG00000015580	APEX1	100	92.453	Cercocebus_atys
ENSPCAG00000010376	APEX1	100	90.881	ENSCLAG00000001002	APEX1	100	90.881	Chinchilla_lanigera
ENSPCAG00000010376	APEX1	100	92.138	ENSCSAG00000016685	-	100	92.138	Chlorocebus_sabaeus
ENSPCAG00000010376	APEX1	100	92.138	ENSCSAG00000016670	-	100	92.138	Chlorocebus_sabaeus
ENSPCAG00000010376	APEX1	100	68.966	ENSCPBG00000009567	APEX1	100	68.966	Chrysemys_picta_bellii
ENSPCAG00000010376	APEX1	91	54.576	ENSCING00000008137	-	94	54.576	Ciona_intestinalis
ENSPCAG00000010376	APEX1	99	48.254	ENSCSAVG00000007144	-	100	54.475	Ciona_savignyi
ENSPCAG00000010376	APEX1	100	92.138	ENSCANG00000030726	APEX1	100	92.138	Colobus_angolensis_palliatus
ENSPCAG00000010376	APEX1	100	88.994	ENSCGRG00001017046	Apex1	100	88.994	Cricetulus_griseus_chok1gshd
ENSPCAG00000010376	APEX1	100	88.994	ENSCGRG00000008984	Apex1	100	88.994	Cricetulus_griseus_crigri
ENSPCAG00000010376	APEX1	99	62.461	ENSCSEG00000017499	apex1	99	62.461	Cynoglossus_semilaevis
ENSPCAG00000010376	APEX1	99	64.873	ENSCVAG00000022075	apex1	99	64.873	Cyprinodon_variegatus
ENSPCAG00000010376	APEX1	100	64.465	ENSDARG00000045843	apex1	100	64.151	Danio_rerio
ENSPCAG00000010376	APEX1	100	89.274	ENSDNOG00000042234	APEX1	95	89.274	Dasypus_novemcinctus
ENSPCAG00000010376	APEX1	100	90.566	ENSDORG00000001616	Apex1	100	90.566	Dipodomys_ordii
ENSPCAG00000010376	APEX1	100	92.767	ENSETEG00000004855	-	100	92.767	Echinops_telfairi
ENSPCAG00000010376	APEX1	75	61.506	ENSEBUG00000000622	-	92	61.506	Eptatretus_burgeri
ENSPCAG00000010376	APEX1	100	92.767	ENSEASG00005017489	APEX1	74	92.767	Equus_asinus_asinus
ENSPCAG00000010376	APEX1	100	92.767	ENSECAG00000022325	APEX1	82	92.767	Equus_caballus
ENSPCAG00000010376	APEX1	91	89.236	ENSEEUG00000012569	APEX1	100	89.236	Erinaceus_europaeus
ENSPCAG00000010376	APEX1	100	63.208	ENSELUG00000021706	apex1	100	63.208	Esox_lucius
ENSPCAG00000010376	APEX1	100	92.138	ENSFCAG00000030869	APEX1	100	92.138	Felis_catus
ENSPCAG00000010376	APEX1	100	90.252	ENSFDAG00000006120	APEX1	100	90.252	Fukomys_damarensis
ENSPCAG00000010376	APEX1	99	65.823	ENSFHEG00000009031	apex1	83	65.823	Fundulus_heteroclitus
ENSPCAG00000010376	APEX1	99	60.759	ENSGMOG00000007943	apex1	99	60.759	Gadus_morhua
ENSPCAG00000010376	APEX1	99	65.190	ENSGAFG00000005311	apex1	99	65.190	Gambusia_affinis
ENSPCAG00000010376	APEX1	99	63.608	ENSGACG00000019497	apex1	99	67.669	Gasterosteus_aculeatus
ENSPCAG00000010376	APEX1	100	68.339	ENSGAGG00000014999	APEX1	100	68.339	Gopherus_agassizii
ENSPCAG00000010376	APEX1	100	92.453	ENSGGOG00000002128	APEX1	100	92.453	Gorilla_gorilla
ENSPCAG00000010376	APEX1	99	64.557	ENSHBUG00000005894	apex1	99	65.190	Haplochromis_burtoni
ENSPCAG00000010376	APEX1	100	90.881	ENSHGLG00000002848	APEX1	100	90.881	Heterocephalus_glaber_female
ENSPCAG00000010376	APEX1	100	90.881	ENSHGLG00100017878	APEX1	100	90.881	Heterocephalus_glaber_male
ENSPCAG00000010376	APEX1	99	64.780	ENSHCOG00000009961	apex1	99	64.780	Hippocampus_comes
ENSPCAG00000010376	APEX1	100	66.144	ENSIPUG00000005799	apex1	100	66.144	Ictalurus_punctatus
ENSPCAG00000010376	APEX1	100	90.566	ENSSTOG00000010096	APEX1	100	90.566	Ictidomys_tridecemlineatus
ENSPCAG00000010376	APEX1	100	76.415	ENSJJAG00000020465	-	96	80.201	Jaculus_jaculus
ENSPCAG00000010376	APEX1	100	80.503	ENSJJAG00000003660	-	100	80.503	Jaculus_jaculus
ENSPCAG00000010376	APEX1	100	89.623	ENSJJAG00000012067	-	100	89.623	Jaculus_jaculus
ENSPCAG00000010376	APEX1	99	64.557	ENSKMAG00000021171	apex1	99	64.557	Kryptolebias_marmoratus
ENSPCAG00000010376	APEX1	88	67.025	ENSLBEG00000010248	apex1	99	62.025	Labrus_bergylta
ENSPCAG00000010376	APEX1	100	63.750	ENSLACG00000008617	APEX1	100	63.750	Latimeria_chalumnae
ENSPCAG00000010376	APEX1	100	64.286	ENSLOCG00000015516	apex1	99	64.286	Lepisosteus_oculatus
ENSPCAG00000010376	APEX1	100	93.082	ENSLAFG00000021872	APEX1	100	93.082	Loxodonta_africana
ENSPCAG00000010376	APEX1	100	92.138	ENSMFAG00000002565	APEX1	100	92.138	Macaca_fascicularis
ENSPCAG00000010376	APEX1	100	92.138	ENSMMUG00000048039	APEX1	100	92.138	Macaca_mulatta
ENSPCAG00000010376	APEX1	100	92.138	ENSMNEG00000036944	APEX1	100	92.138	Macaca_nemestrina
ENSPCAG00000010376	APEX1	100	92.453	ENSMLEG00000042125	APEX1	100	92.453	Mandrillus_leucophaeus
ENSPCAG00000010376	APEX1	99	64.873	ENSMAMG00000023526	apex1	99	64.873	Mastacembelus_armatus
ENSPCAG00000010376	APEX1	86	70.182	ENSMZEG00005014187	apex1	99	65.300	Maylandia_zebra
ENSPCAG00000010376	APEX1	100	89.937	ENSMAUG00000013994	Apex1	100	89.937	Mesocricetus_auratus
ENSPCAG00000010376	APEX1	100	92.138	ENSMICG00000043554	APEX1	100	92.138	Microcebus_murinus
ENSPCAG00000010376	APEX1	100	89.623	ENSMOCG00000013721	Apex1	100	89.623	Microtus_ochrogaster
ENSPCAG00000010376	APEX1	88	65.714	ENSMMOG00000010031	apex1	97	61.129	Mola_mola
ENSPCAG00000010376	APEX1	100	82.500	ENSMODG00000007125	APEX1	100	83.540	Monodelphis_domestica
ENSPCAG00000010376	APEX1	88	63.309	ENSMALG00000011699	apex1	79	61.644	Monopterus_albus
ENSPCAG00000010376	APEX1	99	90.536	MGP_CAROLIEiJ_G0019209	Apex1	100	89.888	Mus_caroli
ENSPCAG00000010376	APEX1	100	91.195	ENSMUSG00000035960	Apex1	100	91.195	Mus_musculus
ENSPCAG00000010376	APEX1	100	91.195	MGP_PahariEiJ_G0030232	Apex1	100	91.195	Mus_pahari
ENSPCAG00000010376	APEX1	100	91.195	MGP_SPRETEiJ_G0020101	Apex1	100	91.195	Mus_spretus
ENSPCAG00000010376	APEX1	100	90.938	ENSMLUG00000028957	APEX1	100	90.938	Myotis_lucifugus
ENSPCAG00000010376	APEX1	100	89.623	ENSNGAG00000002725	-	100	89.623	Nannospalax_galili
ENSPCAG00000010376	APEX1	97	68.831	ENSNGAG00000021748	-	95	68.831	Nannospalax_galili
ENSPCAG00000010376	APEX1	86	70.545	ENSNBRG00000005334	apex1	91	65.615	Neolamprologus_brichardi
ENSPCAG00000010376	APEX1	100	92.453	ENSNLEG00000010839	APEX1	100	92.453	Nomascus_leucogenys
ENSPCAG00000010376	APEX1	100	83.962	ENSMEUG00000014519	APEX1	100	83.962	Notamacropus_eugenii
ENSPCAG00000010376	APEX1	100	90.881	ENSOPRG00000014029	APEX1	100	90.881	Ochotona_princeps
ENSPCAG00000010376	APEX1	97	72.492	ENSODEG00000004777	-	99	72.492	Octodon_degus
ENSPCAG00000010376	APEX1	100	69.444	ENSODEG00000006583	-	100	69.444	Octodon_degus
ENSPCAG00000010376	APEX1	100	91.195	ENSODEG00000001703	-	100	91.195	Octodon_degus
ENSPCAG00000010376	APEX1	87	70.144	ENSONIG00000012089	apex1	99	65.615	Oreochromis_niloticus
ENSPCAG00000010376	APEX1	90	81.754	ENSOANG00000008836	APEX1	80	77.469	Ornithorhynchus_anatinus
ENSPCAG00000010376	APEX1	100	92.453	ENSOCUG00000005022	APEX1	100	92.453	Oryctolagus_cuniculus
ENSPCAG00000010376	APEX1	99	65.094	ENSORLG00000012378	apex1	99	65.094	Oryzias_latipes
ENSPCAG00000010376	APEX1	99	65.094	ENSORLG00020021371	apex1	99	65.094	Oryzias_latipes_hni
ENSPCAG00000010376	APEX1	99	65.094	ENSORLG00015020089	apex1	99	65.094	Oryzias_latipes_hsok
ENSPCAG00000010376	APEX1	99	65.409	ENSOMEG00000018876	apex1	99	65.409	Oryzias_melastigma
ENSPCAG00000010376	APEX1	100	91.824	ENSOGAG00000013335	-	100	91.824	Otolemur_garnettii
ENSPCAG00000010376	APEX1	98	80.769	ENSOGAG00000029355	-	100	80.769	Otolemur_garnettii
ENSPCAG00000010376	APEX1	100	89.937	ENSOARG00000019740	-	100	89.937	Ovis_aries
ENSPCAG00000010376	APEX1	99	75.949	ENSOARG00000014424	-	100	75.949	Ovis_aries
ENSPCAG00000010376	APEX1	97	86.364	ENSOARG00000001876	-	100	86.364	Ovis_aries
ENSPCAG00000010376	APEX1	100	92.453	ENSPPAG00000038760	APEX1	100	92.453	Pan_paniscus
ENSPCAG00000010376	APEX1	100	92.453	ENSPPRG00000011794	APEX1	100	92.453	Panthera_pardus
ENSPCAG00000010376	APEX1	100	92.138	ENSPTIG00000014829	APEX1	100	92.138	Panthera_tigris_altaica
ENSPCAG00000010376	APEX1	100	92.453	ENSPTRG00000006093	APEX1	100	92.453	Pan_troglodytes
ENSPCAG00000010376	APEX1	100	92.453	ENSPANG00000022757	APEX1	100	92.453	Papio_anubis
ENSPCAG00000010376	APEX1	87	66.787	ENSPKIG00000003504	apex1	100	62.305	Paramormyrops_kingsleyae
ENSPCAG00000010376	APEX1	76	65.021	ENSPMGG00000016596	apex1	73	65.021	Periophthalmus_magnuspinnatus
ENSPCAG00000010376	APEX1	100	91.195	ENSPEMG00000019097	Apex1	100	91.195	Peromyscus_maniculatus_bairdii
ENSPCAG00000010376	APEX1	94	65.333	ENSPMAG00000007275	-	99	65.333	Petromyzon_marinus
ENSPCAG00000010376	APEX1	100	81.818	ENSPCIG00000023274	APEX1	100	83.178	Phascolarctos_cinereus
ENSPCAG00000010376	APEX1	88	70.609	ENSPFOG00000004178	apex1	99	65.190	Poecilia_formosa
ENSPCAG00000010376	APEX1	88	70.251	ENSPLAG00000012779	apex1	99	64.873	Poecilia_latipinna
ENSPCAG00000010376	APEX1	88	70.609	ENSPMEG00000019623	apex1	99	65.190	Poecilia_mexicana
ENSPCAG00000010376	APEX1	88	69.892	ENSPREG00000014298	apex1	99	64.557	Poecilia_reticulata
ENSPCAG00000010376	APEX1	100	91.824	ENSPPYG00000005565	APEX1	100	91.824	Pongo_abelii
ENSPCAG00000010376	APEX1	100	92.138	ENSPCOG00000021564	APEX1	100	92.138	Propithecus_coquereli
ENSPCAG00000010376	APEX1	100	92.188	ENSPVAG00000010736	APEX1	100	92.188	Pteropus_vampyrus
ENSPCAG00000010376	APEX1	86	70.182	ENSPNYG00000023940	apex1	99	65.300	Pundamilia_nyererei
ENSPCAG00000010376	APEX1	93	63.851	ENSPNAG00000020897	apex1	96	63.729	Pygocentrus_nattereri
ENSPCAG00000010376	APEX1	100	90.252	ENSRNOG00000009663	Apex1	100	90.252	Rattus_norvegicus
ENSPCAG00000010376	APEX1	100	92.138	ENSRBIG00000038325	APEX1	99	92.138	Rhinopithecus_bieti
ENSPCAG00000010376	APEX1	100	92.767	ENSSBOG00000018921	-	100	92.767	Saimiri_boliviensis_boliviensis
ENSPCAG00000010376	APEX1	100	77.987	ENSSBOG00000031372	-	100	77.987	Saimiri_boliviensis_boliviensis
ENSPCAG00000010376	APEX1	100	81.481	ENSSHAG00000013524	APEX1	100	81.902	Sarcophilus_harrisii
ENSPCAG00000010376	APEX1	100	60.692	ENSSFOG00015001948	apex1	100	60.377	Scleropages_formosus
ENSPCAG00000010376	APEX1	87	67.626	ENSSMAG00000013348	apex1	99	63.722	Scophthalmus_maximus
ENSPCAG00000010376	APEX1	99	63.608	ENSSDUG00000016377	apex1	99	63.608	Seriola_dumerili
ENSPCAG00000010376	APEX1	99	64.557	ENSSLDG00000023005	apex1	99	64.557	Seriola_lalandi_dorsalis
ENSPCAG00000010376	APEX1	90	71.228	ENSSPUG00000000531	APEX1	95	71.228	Sphenodon_punctatus
ENSPCAG00000010376	APEX1	99	64.241	ENSSPAG00000000458	apex1	99	64.241	Stegastes_partitus
ENSPCAG00000010376	APEX1	96	52.258	ENSSSCG00000039705	-	99	54.305	Sus_scrofa
ENSPCAG00000010376	APEX1	100	90.252	ENSSSCG00000040060	-	100	90.252	Sus_scrofa
ENSPCAG00000010376	APEX1	74	58.051	ENSTGUG00000014378	APEX1	100	58.051	Taeniopygia_guttata
ENSPCAG00000010376	APEX1	87	66.906	ENSTRUG00000004268	apex1	95	62.658	Takifugu_rubripes
ENSPCAG00000010376	APEX1	99	62.975	ENSTNIG00000005778	apex1	99	62.975	Tetraodon_nigroviridis
ENSPCAG00000010376	APEX1	100	87.421	ENSTBEG00000006405	APEX1	100	87.421	Tupaia_belangeri
ENSPCAG00000010376	APEX1	74	91.525	ENSTTRG00000007860	APEX1	100	91.525	Tursiops_truncatus
ENSPCAG00000010376	APEX1	100	91.824	ENSUAMG00000010457	APEX1	100	91.824	Ursus_americanus
ENSPCAG00000010376	APEX1	100	91.824	ENSUMAG00000009178	APEX1	100	91.824	Ursus_maritimus
ENSPCAG00000010376	APEX1	74	86.441	ENSVPAG00000005083	APEX1	100	86.441	Vicugna_pacos
ENSPCAG00000010376	APEX1	100	91.195	ENSVVUG00000009010	APEX1	100	91.195	Vulpes_vulpes
ENSPCAG00000010376	APEX1	100	65.421	ENSXETG00000024773	apex1	100	65.421	Xenopus_tropicalis
ENSPCAG00000010376	APEX1	88	70.251	ENSXCOG00000015233	apex1	99	65.506	Xiphophorus_couchianus
ENSPCAG00000010376	APEX1	100	65.094	ENSXMAG00000006195	apex1	99	65.506	Xiphophorus_maculatus