EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000010775 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 37911 bases
Position: chrGeneScaffold_3316:9673-47583
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010082	zf-CCCH	PF00642.24	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010808	RC3H1-201	3153	-	ENSPCAP00000010082	1050 (aa)	-	UPI00018AE472

Gene Model

Click here to download ENSPCAG00000010775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000010775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000010775	RC3H1	64	67.568	ENSPCAG00000010154	RC3H2	56	67.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000010775	RC3H1	87	100.000	ENSG00000135870	RC3H1	81	100.000	Homo_sapiens
ENSPCAG00000010775	RC3H1	87	100.000	ENSAMEG00000015657	RC3H1	81	100.000	Ailuropoda_melanoleuca
ENSPCAG00000010775	RC3H1	87	94.737	ENSAPLG00000005341	RC3H1	81	94.737	Anas_platyrhynchos
ENSPCAG00000010775	RC3H1	87	89.474	ENSACAG00000015271	RC3H1	80	89.474	Anolis_carolinensis
ENSPCAG00000010775	RC3H1	87	100.000	ENSANAG00000036716	RC3H1	81	100.000	Aotus_nancymaae
ENSPCAG00000010775	RC3H1	87	100.000	ENSBTAG00000052708	RC3H1	80	100.000	Bos_taurus
ENSPCAG00000010775	RC3H1	87	100.000	ENSCJAG00000009106	RC3H1	81	100.000	Callithrix_jacchus
ENSPCAG00000010775	RC3H1	87	100.000	ENSCAFG00000014434	RC3H1	81	100.000	Canis_familiaris
ENSPCAG00000010775	RC3H1	87	100.000	ENSCAFG00020017112	RC3H1	80	100.000	Canis_lupus_dingo
ENSPCAG00000010775	RC3H1	87	100.000	ENSCHIG00000002873	RC3H1	80	100.000	Capra_hircus
ENSPCAG00000010775	RC3H1	87	100.000	ENSTSYG00000003913	RC3H1	81	100.000	Carlito_syrichta
ENSPCAG00000010775	RC3H1	87	94.737	ENSCPOG00000004349	RC3H1	80	94.737	Cavia_porcellus
ENSPCAG00000010775	RC3H1	87	100.000	ENSCCAG00000025652	RC3H1	80	100.000	Cebus_capucinus
ENSPCAG00000010775	RC3H1	87	100.000	ENSCATG00000033497	RC3H1	81	100.000	Cercocebus_atys
ENSPCAG00000010775	RC3H1	87	100.000	ENSCLAG00000011267	RC3H1	81	100.000	Chinchilla_lanigera
ENSPCAG00000010775	RC3H1	82	100.000	ENSCSAG00000011823	RC3H1	68	100.000	Chlorocebus_sabaeus
ENSPCAG00000010775	RC3H1	87	94.737	ENSCPBG00000014670	RC3H1	81	94.737	Chrysemys_picta_bellii
ENSPCAG00000010775	RC3H1	87	97.368	ENSCANG00000032120	RC3H1	81	97.368	Colobus_angolensis_palliatus
ENSPCAG00000010775	RC3H1	87	97.368	ENSCGRG00001020812	Rc3h1	80	97.368	Cricetulus_griseus_chok1gshd
ENSPCAG00000010775	RC3H1	87	97.368	ENSCGRG00000011952	Rc3h1	80	97.368	Cricetulus_griseus_crigri
ENSPCAG00000010775	RC3H1	59	89.871	ENSDNOG00000011494	RC3H1	99	89.871	Dasypus_novemcinctus
ENSPCAG00000010775	RC3H1	87	100.000	ENSDORG00000004855	Rc3h1	81	100.000	Dipodomys_ordii
ENSPCAG00000010775	RC3H1	74	97.368	ENSETEG00000012064	RC3H1	74	97.368	Echinops_telfairi
ENSPCAG00000010775	RC3H1	87	100.000	ENSEASG00005017000	RC3H1	80	100.000	Equus_asinus_asinus
ENSPCAG00000010775	RC3H1	87	100.000	ENSECAG00000021208	RC3H1	80	100.000	Equus_caballus
ENSPCAG00000010775	RC3H1	70	100.000	ENSEEUG00000014861	RC3H1	68	100.000	Erinaceus_europaeus
ENSPCAG00000010775	RC3H1	87	100.000	ENSFCAG00000014924	RC3H1	81	100.000	Felis_catus
ENSPCAG00000010775	RC3H1	87	94.737	ENSFALG00000002947	RC3H1	81	94.737	Ficedula_albicollis
ENSPCAG00000010775	RC3H1	87	97.368	ENSFDAG00000013303	RC3H1	81	97.368	Fukomys_damarensis
ENSPCAG00000010775	RC3H1	87	92.105	ENSGALG00000004587	RC3H1	80	92.105	Gallus_gallus
ENSPCAG00000010775	RC3H1	87	97.368	ENSGAGG00000018194	RC3H1	80	97.368	Gopherus_agassizii
ENSPCAG00000010775	RC3H1	87	100.000	ENSGGOG00000005735	RC3H1	80	100.000	Gorilla_gorilla
ENSPCAG00000010775	RC3H1	74	97.368	ENSHGLG00000004183	-	81	97.368	Heterocephalus_glaber_female
ENSPCAG00000010775	RC3H1	87	100.000	ENSHGLG00100008577	RC3H1	81	100.000	Heterocephalus_glaber_male
ENSPCAG00000010775	RC3H1	87	100.000	ENSSTOG00000016033	RC3H1	81	100.000	Ictidomys_tridecemlineatus
ENSPCAG00000010775	RC3H1	87	100.000	ENSJJAG00000018915	Rc3h1	80	100.000	Jaculus_jaculus
ENSPCAG00000010775	RC3H1	87	84.211	ENSLACG00000016186	RC3H1	80	84.211	Latimeria_chalumnae
ENSPCAG00000010775	RC3H1	84	100.000	ENSLAFG00000004367	RC3H1	80	100.000	Loxodonta_africana
ENSPCAG00000010775	RC3H1	87	100.000	ENSMFAG00000033725	RC3H1	81	100.000	Macaca_fascicularis
ENSPCAG00000010775	RC3H1	87	100.000	ENSMMUG00000000630	RC3H1	81	100.000	Macaca_mulatta
ENSPCAG00000010775	RC3H1	87	100.000	ENSMNEG00000035968	RC3H1	81	100.000	Macaca_nemestrina
ENSPCAG00000010775	RC3H1	87	100.000	ENSMLEG00000037455	RC3H1	81	100.000	Mandrillus_leucophaeus
ENSPCAG00000010775	RC3H1	74	97.368	ENSMAUG00000020864	Rc3h1	79	97.368	Mesocricetus_auratus
ENSPCAG00000010775	RC3H1	87	100.000	ENSMICG00000003000	RC3H1	81	100.000	Microcebus_murinus
ENSPCAG00000010775	RC3H1	87	97.368	ENSMOCG00000016587	Rc3h1	85	97.368	Microtus_ochrogaster
ENSPCAG00000010775	RC3H1	87	100.000	ENSMODG00000004289	RC3H1	81	100.000	Monodelphis_domestica
ENSPCAG00000010775	RC3H1	87	97.368	MGP_CAROLIEiJ_G0014756	Rc3h1	81	97.368	Mus_caroli
ENSPCAG00000010775	RC3H1	87	97.368	ENSMUSG00000040423	Rc3h1	81	97.368	Mus_musculus
ENSPCAG00000010775	RC3H1	87	97.368	MGP_PahariEiJ_G0027992	Rc3h1	81	97.368	Mus_pahari
ENSPCAG00000010775	RC3H1	87	97.368	MGP_SPRETEiJ_G0015563	Rc3h1	81	97.368	Mus_spretus
ENSPCAG00000010775	RC3H1	87	100.000	ENSMPUG00000004747	RC3H1	81	100.000	Mustela_putorius_furo
ENSPCAG00000010775	RC3H1	87	92.105	ENSMLUG00000011127	RC3H1	80	92.105	Myotis_lucifugus
ENSPCAG00000010775	RC3H1	87	97.368	ENSNGAG00000011135	Rc3h1	81	97.368	Nannospalax_galili
ENSPCAG00000010775	RC3H1	87	100.000	ENSNLEG00000015327	RC3H1	81	100.000	Nomascus_leucogenys
ENSPCAG00000010775	RC3H1	83	83.066	ENSOPRG00000013068	RC3H1	77	82.609	Ochotona_princeps
ENSPCAG00000010775	RC3H1	87	100.000	ENSODEG00000014185	RC3H1	81	100.000	Octodon_degus
ENSPCAG00000010775	RC3H1	87	97.368	ENSOANG00000000924	RC3H1	81	97.368	Ornithorhynchus_anatinus
ENSPCAG00000010775	RC3H1	85	100.000	ENSOCUG00000004930	RC3H1	79	100.000	Oryctolagus_cuniculus
ENSPCAG00000010775	RC3H1	87	100.000	ENSOGAG00000004044	RC3H1	81	100.000	Otolemur_garnettii
ENSPCAG00000010775	RC3H1	87	100.000	ENSOARG00000013011	RC3H1	81	100.000	Ovis_aries
ENSPCAG00000010775	RC3H1	87	100.000	ENSPPAG00000039253	RC3H1	81	100.000	Pan_paniscus
ENSPCAG00000010775	RC3H1	87	100.000	ENSPPRG00000009007	RC3H1	80	100.000	Panthera_pardus
ENSPCAG00000010775	RC3H1	87	100.000	ENSPTIG00000015326	RC3H1	81	100.000	Panthera_tigris_altaica
ENSPCAG00000010775	RC3H1	87	100.000	ENSPTRG00000001702	RC3H1	81	100.000	Pan_troglodytes
ENSPCAG00000010775	RC3H1	87	100.000	ENSPANG00000008886	RC3H1	81	100.000	Papio_anubis
ENSPCAG00000010775	RC3H1	87	97.368	ENSPSIG00000016181	RC3H1	80	97.368	Pelodiscus_sinensis
ENSPCAG00000010775	RC3H1	87	97.368	ENSPEMG00000011966	Rc3h1	80	97.368	Peromyscus_maniculatus_bairdii
ENSPCAG00000010775	RC3H1	57	100.000	ENSPCIG00000002058	RC3H1	73	100.000	Phascolarctos_cinereus
ENSPCAG00000010775	RC3H1	87	100.000	ENSPPYG00000000490	RC3H1	80	100.000	Pongo_abelii
ENSPCAG00000010775	RC3H1	87	100.000	ENSPCOG00000021795	RC3H1	94	100.000	Propithecus_coquereli
ENSPCAG00000010775	RC3H1	80	100.000	ENSPVAG00000007593	RC3H1	74	100.000	Pteropus_vampyrus
ENSPCAG00000010775	RC3H1	84	71.053	ENSPNAG00000023439	rc3h1a	78	71.053	Pygocentrus_nattereri
ENSPCAG00000010775	RC3H1	87	100.000	ENSRBIG00000037743	RC3H1	81	100.000	Rhinopithecus_bieti
ENSPCAG00000010775	RC3H1	87	100.000	ENSRROG00000036546	RC3H1	81	100.000	Rhinopithecus_roxellana
ENSPCAG00000010775	RC3H1	87	100.000	ENSSBOG00000010664	RC3H1	86	100.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000010775	RC3H1	87	100.000	ENSSHAG00000007589	RC3H1	81	100.000	Sarcophilus_harrisii
ENSPCAG00000010775	RC3H1	69	90.426	ENSSARG00000004660	RC3H1	63	90.426	Sorex_araneus
ENSPCAG00000010775	RC3H1	87	94.737	ENSSPUG00000018472	RC3H1	80	94.737	Sphenodon_punctatus
ENSPCAG00000010775	RC3H1	87	100.000	ENSSSCG00000015498	RC3H1	81	100.000	Sus_scrofa
ENSPCAG00000010775	RC3H1	87	92.105	ENSTGUG00000004090	RC3H1	81	92.105	Taeniopygia_guttata
ENSPCAG00000010775	RC3H1	80	100.000	ENSTBEG00000005015	RC3H1	74	100.000	Tupaia_belangeri
ENSPCAG00000010775	RC3H1	87	100.000	ENSTTRG00000008572	RC3H1	81	100.000	Tursiops_truncatus
ENSPCAG00000010775	RC3H1	87	100.000	ENSUAMG00000019525	RC3H1	80	100.000	Ursus_americanus
ENSPCAG00000010775	RC3H1	87	100.000	ENSUMAG00000020087	RC3H1	81	100.000	Ursus_maritimus
ENSPCAG00000010775	RC3H1	78	97.872	ENSVPAG00000002591	RC3H1	72	97.872	Vicugna_pacos
ENSPCAG00000010775	RC3H1	87	100.000	ENSVVUG00000014201	RC3H1	81	100.000	Vulpes_vulpes
ENSPCAG00000010775	RC3H1	87	82.500	ENSXETG00000020030	rc3h1	80	82.500	Xenopus_tropicalis