EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000010954 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 2733 bases
Position: chrscaffold_43841:7055-9787
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010238	RRM_1	PF00076.22	1.6e-32	1	2
ENSPCAP00000010238	RRM_1	PF00076.22	1.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010972	SRSF6-201	996	-	ENSPCAP00000010238	332 (aa)	-	UPI00018AD598

Gene Model

Click here to download ENSPCAG00000010954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000010954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000010954	SRSF6	60	41.148	ENSPCAG00000005199	SRSF1	78	39.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000010954	SRSF6	96	93.498	ENSG00000124193	SRSF6	58	98.718	Homo_sapiens
ENSPCAG00000010954	SRSF6	56	77.660	ENSAMEG00000003710	SRSF6	92	82.445	Ailuropoda_melanoleuca
ENSPCAG00000010954	SRSF6	89	62.791	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSPCAG00000010954	SRSF6	90	69.128	ENSACIG00000023658	-	56	86.111	Amphilophus_citrinellus
ENSPCAG00000010954	SRSF6	55	85.792	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSPCAG00000010954	SRSF6	55	87.027	ENSAPEG00000013086	-	53	86.559	Amphiprion_percula
ENSPCAG00000010954	SRSF6	74	68.400	ENSAPEG00000020746	-	75	73.460	Amphiprion_percula
ENSPCAG00000010954	SRSF6	55	83.516	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSPCAG00000010954	SRSF6	55	93.989	ENSACAG00000002061	SRSF6	52	91.351	Anolis_carolinensis
ENSPCAG00000010954	SRSF6	96	92.879	ENSANAG00000024080	SRSF6	58	98.718	Aotus_nancymaae
ENSPCAG00000010954	SRSF6	55	82.258	ENSAMXG00000042692	-	96	77.037	Astyanax_mexicanus
ENSPCAG00000010954	SRSF6	56	97.861	ENSBTAG00000008527	SRSF6	58	97.436	Bos_taurus
ENSPCAG00000010954	SRSF6	80	97.358	ENSCJAG00000048403	SRSF6	98	97.358	Callithrix_jacchus
ENSPCAG00000010954	SRSF6	96	93.189	ENSCAFG00000009289	SRSF6	92	94.340	Canis_familiaris
ENSPCAG00000010954	SRSF6	96	93.189	ENSCAFG00020013559	SRSF6	92	94.340	Canis_lupus_dingo
ENSPCAG00000010954	SRSF6	56	97.861	ENSCHIG00000015890	-	58	97.436	Capra_hircus
ENSPCAG00000010954	SRSF6	56	96.791	ENSCHIG00000009148	-	54	96.757	Capra_hircus
ENSPCAG00000010954	SRSF6	96	74.923	ENSCPOG00000011761	SRSF6	58	98.718	Cavia_porcellus
ENSPCAG00000010954	SRSF6	96	93.189	ENSCCAG00000026018	-	58	98.718	Cebus_capucinus
ENSPCAG00000010954	SRSF6	56	86.559	ENSCCAG00000018540	-	61	86.559	Cebus_capucinus
ENSPCAG00000010954	SRSF6	96	93.168	ENSCATG00000030794	SRSF6	58	98.718	Cercocebus_atys
ENSPCAG00000010954	SRSF6	96	92.593	ENSCLAG00000010247	SRSF6	58	98.718	Chinchilla_lanigera
ENSPCAG00000010954	SRSF6	96	93.168	ENSCSAG00000014022	SRSF6	54	98.378	Chlorocebus_sabaeus
ENSPCAG00000010954	SRSF6	56	92.021	ENSCPBG00000018200	SRSF6	54	94.149	Chrysemys_picta_bellii
ENSPCAG00000010954	SRSF6	96	93.168	ENSCANG00000037774	-	54	97.297	Colobus_angolensis_palliatus
ENSPCAG00000010954	SRSF6	96	92.236	ENSCGRG00001022339	Srsf6	58	96.154	Cricetulus_griseus_chok1gshd
ENSPCAG00000010954	SRSF6	55	82.353	ENSDARG00000016783	srsf6b	82	89.744	Danio_rerio
ENSPCAG00000010954	SRSF6	96	88.000	ENSDNOG00000008410	SRSF6	53	98.378	Dasypus_novemcinctus
ENSPCAG00000010954	SRSF6	96	92.615	ENSDORG00000028378	Srsf6	58	98.718	Dipodomys_ordii
ENSPCAG00000010954	SRSF6	56	93.048	ENSETEG00000006221	SRSF6	93	84.424	Echinops_telfairi
ENSPCAG00000010954	SRSF6	96	90.093	ENSEASG00005023429	SRSF6	92	91.195	Equus_asinus_asinus
ENSPCAG00000010954	SRSF6	96	90.093	ENSECAG00000023932	SRSF6	92	91.195	Equus_caballus
ENSPCAG00000010954	SRSF6	55	83.978	ENSELUG00000013506	SRSF6	70	87.179	Esox_lucius
ENSPCAG00000010954	SRSF6	96	93.189	ENSFCAG00000032814	SRSF6	92	94.340	Felis_catus
ENSPCAG00000010954	SRSF6	91	69.408	ENSFHEG00000023065	srsf6a	55	85.870	Fundulus_heteroclitus
ENSPCAG00000010954	SRSF6	60	68.500	ENSGMOG00000006105	srsf6a	62	71.111	Gadus_morhua
ENSPCAG00000010954	SRSF6	55	81.768	ENSGMOG00000014458	srsf6a	52	77.083	Gadus_morhua
ENSPCAG00000010954	SRSF6	55	90.909	ENSGALG00000000990	SRSF6	58	98.718	Gallus_gallus
ENSPCAG00000010954	SRSF6	91	57.396	ENSGACG00000006084	srsf6a	53	81.183	Gasterosteus_aculeatus
ENSPCAG00000010954	SRSF6	56	92.021	ENSGAGG00000003238	SRSF6	54	94.149	Gopherus_agassizii
ENSPCAG00000010954	SRSF6	96	93.498	ENSGGOG00000009808	SRSF6	58	98.718	Gorilla_gorilla
ENSPCAG00000010954	SRSF6	65	74.123	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSPCAG00000010954	SRSF6	96	92.593	ENSHGLG00000007348	SRSF6	58	98.718	Heterocephalus_glaber_female
ENSPCAG00000010954	SRSF6	58	78.238	ENSHGLG00000007701	-	57	77.297	Heterocephalus_glaber_female
ENSPCAG00000010954	SRSF6	55	84.153	ENSHCOG00000002740	srsf6a	57	83.696	Hippocampus_comes
ENSPCAG00000010954	SRSF6	53	83.523	ENSIPUG00000016856	SRSF6	58	73.632	Ictalurus_punctatus
ENSPCAG00000010954	SRSF6	55	85.326	ENSIPUG00000004776	-	64	84.783	Ictalurus_punctatus
ENSPCAG00000010954	SRSF6	96	93.498	ENSSTOG00000010866	SRSF6	58	98.718	Ictidomys_tridecemlineatus
ENSPCAG00000010954	SRSF6	91	62.583	ENSKMAG00000011934	srsf6a	59	84.239	Kryptolebias_marmoratus
ENSPCAG00000010954	SRSF6	55	84.239	ENSLBEG00000007356	srsf6a	52	84.946	Labrus_bergylta
ENSPCAG00000010954	SRSF6	89	82.943	ENSLACG00000005466	SRSF6	54	91.304	Latimeria_chalumnae
ENSPCAG00000010954	SRSF6	96	93.168	ENSMFAG00000036925	SRSF6	58	98.718	Macaca_fascicularis
ENSPCAG00000010954	SRSF6	96	93.168	ENSMMUG00000006742	SRSF6	58	98.718	Macaca_mulatta
ENSPCAG00000010954	SRSF6	96	92.547	ENSMNEG00000027392	-	58	96.154	Macaca_nemestrina
ENSPCAG00000010954	SRSF6	95	89.097	ENSMNEG00000038270	-	54	97.297	Macaca_nemestrina
ENSPCAG00000010954	SRSF6	55	86.486	ENSMAMG00000017161	srsf6a	53	86.022	Mastacembelus_armatus
ENSPCAG00000010954	SRSF6	55	82.320	ENSMZEG00005020658	-	60	81.215	Maylandia_zebra
ENSPCAG00000010954	SRSF6	65	72.294	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSPCAG00000010954	SRSF6	96	92.593	ENSMICG00000008537	SRSF6	92	94.340	Microcebus_murinus
ENSPCAG00000010954	SRSF6	56	95.161	ENSMODG00000003107	SRSF6	55	96.237	Monodelphis_domestica
ENSPCAG00000010954	SRSF6	96	91.304	MGP_CAROLIEiJ_G0024606	Srsf6	58	96.154	Mus_caroli
ENSPCAG00000010954	SRSF6	96	91.615	ENSMUSG00000016921	Srsf6	58	96.154	Mus_musculus
ENSPCAG00000010954	SRSF6	96	91.304	MGP_PahariEiJ_G0026050	Srsf6	58	96.154	Mus_pahari
ENSPCAG00000010954	SRSF6	96	91.615	MGP_SPRETEiJ_G0025528	Srsf6	58	96.154	Mus_spretus
ENSPCAG00000010954	SRSF6	85	96.842	ENSMPUG00000017692	SRSF6	99	96.842	Mustela_putorius_furo
ENSPCAG00000010954	SRSF6	95	77.640	ENSMLUG00000016618	SRSF6	54	63.208	Myotis_lucifugus
ENSPCAG00000010954	SRSF6	96	91.900	ENSNGAG00000017560	Srsf6	58	98.718	Nannospalax_galili
ENSPCAG00000010954	SRSF6	55	86.885	ENSNBRG00000001846	-	62	75.893	Neolamprologus_brichardi
ENSPCAG00000010954	SRSF6	55	83.060	ENSNBRG00000014709	-	58	84.239	Neolamprologus_brichardi
ENSPCAG00000010954	SRSF6	96	93.498	ENSNLEG00000006524	SRSF6	58	98.718	Nomascus_leucogenys
ENSPCAG00000010954	SRSF6	56	95.161	ENSMEUG00000014615	SRSF6	61	96.237	Notamacropus_eugenii
ENSPCAG00000010954	SRSF6	55	84.153	ENSONIG00000001925	-	52	86.559	Oreochromis_niloticus
ENSPCAG00000010954	SRSF6	55	84.699	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSPCAG00000010954	SRSF6	56	71.569	ENSOCUG00000009785	-	63	76.042	Oryctolagus_cuniculus
ENSPCAG00000010954	SRSF6	69	55.702	ENSOCUG00000023999	-	70	62.011	Oryctolagus_cuniculus
ENSPCAG00000010954	SRSF6	56	97.861	ENSOGAG00000014468	SRSF6	54	97.838	Otolemur_garnettii
ENSPCAG00000010954	SRSF6	56	91.444	ENSOARG00000003117	SRSF6	53	91.351	Ovis_aries
ENSPCAG00000010954	SRSF6	92	82.792	ENSPPAG00000043131	-	58	83.333	Pan_paniscus
ENSPCAG00000010954	SRSF6	96	93.189	ENSPPAG00000034327	-	54	97.838	Pan_paniscus
ENSPCAG00000010954	SRSF6	96	93.189	ENSPPRG00000008917	SRSF6	92	94.340	Panthera_pardus
ENSPCAG00000010954	SRSF6	96	93.808	ENSPTRG00000044686	-	58	98.718	Pan_troglodytes
ENSPCAG00000010954	SRSF6	92	82.792	ENSPTRG00000046274	-	58	83.333	Pan_troglodytes
ENSPCAG00000010954	SRSF6	96	93.168	ENSPANG00000035224	SRSF6	58	98.718	Papio_anubis
ENSPCAG00000010954	SRSF6	95	67.188	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSPCAG00000010954	SRSF6	54	75.691	ENSPKIG00000015703	-	83	68.696	Paramormyrops_kingsleyae
ENSPCAG00000010954	SRSF6	91	70.492	ENSPMGG00000014963	srsf6a	55	87.500	Periophthalmus_magnuspinnatus
ENSPCAG00000010954	SRSF6	56	95.161	ENSPCIG00000003820	SRSF6	58	98.718	Phascolarctos_cinereus
ENSPCAG00000010954	SRSF6	55	86.207	ENSPFOG00000006437	srsf6a	52	66.667	Poecilia_formosa
ENSPCAG00000010954	SRSF6	55	83.333	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSPCAG00000010954	SRSF6	55	84.783	ENSPMEG00000006042	SRSF6	54	86.486	Poecilia_mexicana
ENSPCAG00000010954	SRSF6	96	93.498	ENSPPYG00000011019	SRSF6	54	98.378	Pongo_abelii
ENSPCAG00000010954	SRSF6	96	92.593	ENSPCOG00000026364	SRSF6	92	94.340	Propithecus_coquereli
ENSPCAG00000010954	SRSF6	96	92.547	ENSPVAG00000015232	SRSF6	54	97.297	Pteropus_vampyrus
ENSPCAG00000010954	SRSF6	55	83.060	ENSPNYG00000004944	-	58	84.239	Pundamilia_nyererei
ENSPCAG00000010954	SRSF6	55	86.885	ENSPNYG00000011272	-	51	86.022	Pundamilia_nyererei
ENSPCAG00000010954	SRSF6	96	91.615	ENSRNOG00000006380	Srsf6	55	97.297	Rattus_norvegicus
ENSPCAG00000010954	SRSF6	95	88.750	ENSRBIG00000041414	SRSF6	62	98.750	Rhinopithecus_bieti
ENSPCAG00000010954	SRSF6	96	91.304	ENSRROG00000029989	SRSF6	58	98.718	Rhinopithecus_roxellana
ENSPCAG00000010954	SRSF6	94	67.823	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSPCAG00000010954	SRSF6	96	92.879	ENSSBOG00000033708	-	58	98.718	Saimiri_boliviensis_boliviensis
ENSPCAG00000010954	SRSF6	56	95.161	ENSSHAG00000012805	SRSF6	55	96.237	Sarcophilus_harrisii
ENSPCAG00000010954	SRSF6	95	63.533	ENSSFOG00015019681	-	53	80.412	Scleropages_formosus
ENSPCAG00000010954	SRSF6	55	88.398	ENSSFOG00015015169	SRSF6	60	87.500	Scleropages_formosus
ENSPCAG00000010954	SRSF6	55	80.769	ENSSMAG00000017447	-	55	80.435	Scophthalmus_maximus
ENSPCAG00000010954	SRSF6	55	86.486	ENSSDUG00000016097	srsf6a	53	86.022	Seriola_dumerili
ENSPCAG00000010954	SRSF6	55	86.486	ENSSLDG00000022841	srsf6a	54	86.022	Seriola_lalandi_dorsalis
ENSPCAG00000010954	SRSF6	70	90.254	ENSSARG00000001602	SRSF6	86	91.892	Sorex_araneus
ENSPCAG00000010954	SRSF6	55	94.536	ENSSPUG00000004967	SRSF6	58	98.718	Sphenodon_punctatus
ENSPCAG00000010954	SRSF6	78	69.549	ENSSPAG00000002362	srsf6a	67	84.656	Stegastes_partitus
ENSPCAG00000010954	SRSF6	85	96.503	ENSSSCG00000007362	SRSF6	95	96.503	Sus_scrofa
ENSPCAG00000010954	SRSF6	55	94.022	ENSTGUG00000003455	SRSF6	53	94.624	Taeniopygia_guttata
ENSPCAG00000010954	SRSF6	91	69.637	ENSTNIG00000001692	srsf6a	57	84.409	Tetraodon_nigroviridis
ENSPCAG00000010954	SRSF6	96	93.189	ENSUAMG00000003559	SRSF6	92	94.340	Ursus_americanus
ENSPCAG00000010954	SRSF6	55	86.339	ENSXMAG00000021849	srsf6a	55	85.870	Xiphophorus_maculatus