EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000011020 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 9228 bases
Position: chrGeneScaffold_5052:21040-30267
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010251	zf-C2H2	PF00096.26	7.6e-16	1	4
ENSPCAP00000010251	zf-C2H2	PF00096.26	7.6e-16	2	4
ENSPCAP00000010251	zf-C2H2	PF00096.26	7.6e-16	3	4
ENSPCAP00000010251	zf-C2H2	PF00096.26	7.6e-16	4	4
ENSPCAP00000010251	zf-met	PF12874.7	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000010985	GFI1-201	1278	-	ENSPCAP00000010251	425 (aa)	-	UPI00018AE08D

Gene Model

Click here to download ENSPCAG00000011020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011020	GFI1	100	79.529	ENSG00000162676	GFI1	100	78.824	Homo_sapiens
ENSPCAG00000011020	GFI1	100	52.103	ENSAPOG00000015189	gfi1ab	100	52.103	Acanthochromis_polyacanthus
ENSPCAG00000011020	GFI1	100	51.748	ENSACIG00000016354	gfi1ab	100	51.748	Amphilophus_citrinellus
ENSPCAG00000011020	GFI1	100	52.459	ENSAOCG00000008339	gfi1ab	100	52.459	Amphiprion_ocellaris
ENSPCAG00000011020	GFI1	100	51.740	ENSAPEG00000023870	gfi1ab	100	51.740	Amphiprion_percula
ENSPCAG00000011020	GFI1	100	48.946	ENSATEG00000009167	gfi1ab	89	48.946	Anabas_testudineus
ENSPCAG00000011020	GFI1	87	63.003	ENSAPLG00000015700	GFI1	99	63.003	Anas_platyrhynchos
ENSPCAG00000011020	GFI1	100	60.820	ENSACAG00000004498	GFI1	100	61.009	Anolis_carolinensis
ENSPCAG00000011020	GFI1	100	77.647	ENSANAG00000019656	GFI1	100	76.941	Aotus_nancymaae
ENSPCAG00000011020	GFI1	100	51.852	ENSACLG00000026458	gfi1ab	93	51.852	Astatotilapia_calliptera
ENSPCAG00000011020	GFI1	100	50.000	ENSAMXG00000039600	gfi1ab	100	50.000	Astyanax_mexicanus
ENSPCAG00000011020	GFI1	100	79.059	ENSBTAG00000016723	GFI1	100	79.059	Bos_taurus
ENSPCAG00000011020	GFI1	100	77.882	ENSCJAG00000017609	GFI1	100	76.235	Callithrix_jacchus
ENSPCAG00000011020	GFI1	100	79.765	ENSCAFG00000020155	GFI1	100	79.765	Canis_familiaris
ENSPCAG00000011020	GFI1	100	79.765	ENSCAFG00020013371	GFI1	88	79.765	Canis_lupus_dingo
ENSPCAG00000011020	GFI1	100	79.059	ENSCHIG00000016135	GFI1	100	79.059	Capra_hircus
ENSPCAG00000011020	GFI1	100	78.118	ENSCPOG00000011727	GFI1	100	77.647	Cavia_porcellus
ENSPCAG00000011020	GFI1	100	78.588	ENSCCAG00000036072	GFI1	100	77.176	Cebus_capucinus
ENSPCAG00000011020	GFI1	100	79.529	ENSCATG00000037873	GFI1	100	78.824	Cercocebus_atys
ENSPCAG00000011020	GFI1	100	73.733	ENSCLAG00000005915	GFI1	100	73.272	Chinchilla_lanigera
ENSPCAG00000011020	GFI1	98	76.022	ENSCSAG00000001469	GFI1	100	75.204	Chlorocebus_sabaeus
ENSPCAG00000011020	GFI1	100	79.765	ENSCANG00000034077	GFI1	100	79.059	Colobus_angolensis_palliatus
ENSPCAG00000011020	GFI1	100	72.706	ENSCGRG00001015432	Gfi1	100	72.235	Cricetulus_griseus_chok1gshd
ENSPCAG00000011020	GFI1	100	47.685	ENSCSEG00000017729	GFI1	100	47.685	Cynoglossus_semilaevis
ENSPCAG00000011020	GFI1	100	50.000	ENSCVAG00000004930	GFI1	100	50.000	Cyprinodon_variegatus
ENSPCAG00000011020	GFI1	100	50.580	ENSCVAG00000011828	gfi1ab	100	50.580	Cyprinodon_variegatus
ENSPCAG00000011020	GFI1	100	53.132	ENSDARG00000044457	gfi1ab	100	53.132	Danio_rerio
ENSPCAG00000011020	GFI1	100	81.882	ENSDNOG00000000782	GFI1	97	80.706	Dasypus_novemcinctus
ENSPCAG00000011020	GFI1	100	78.169	ENSEASG00005015509	GFI1	86	78.638	Equus_asinus_asinus
ENSPCAG00000011020	GFI1	98	75.204	ENSECAG00000006647	GFI1	92	71.939	Equus_caballus
ENSPCAG00000011020	GFI1	100	72.706	ENSEEUG00000000198	GFI1	100	72.706	Erinaceus_europaeus
ENSPCAG00000011020	GFI1	100	52.535	ENSELUG00000003015	gfi1ab	99	52.535	Esox_lucius
ENSPCAG00000011020	GFI1	100	48.485	ENSELUG00000019033	GFI1	100	47.786	Esox_lucius
ENSPCAG00000011020	GFI1	100	80.000	ENSFCAG00000005914	GFI1	100	80.000	Felis_catus
ENSPCAG00000011020	GFI1	100	49.324	ENSFHEG00000000341	GFI1	100	49.324	Fundulus_heteroclitus
ENSPCAG00000011020	GFI1	100	50.935	ENSFHEG00000010997	gfi1ab	100	50.935	Fundulus_heteroclitus
ENSPCAG00000011020	GFI1	100	48.966	ENSGMOG00000007737	gfi1ab	100	48.966	Gadus_morhua
ENSPCAG00000011020	GFI1	100	62.903	ENSGALG00000043650	GFI1	100	62.673	Gallus_gallus
ENSPCAG00000011020	GFI1	100	51.515	ENSGAFG00000016637	gfi1ab	100	51.515	Gambusia_affinis
ENSPCAG00000011020	GFI1	100	49.321	ENSGAFG00000018063	GFI1	100	49.321	Gambusia_affinis
ENSPCAG00000011020	GFI1	100	51.408	ENSGACG00000004257	gfi1ab	97	51.408	Gasterosteus_aculeatus
ENSPCAG00000011020	GFI1	100	79.529	ENSGGOG00000005320	GFI1	100	78.824	Gorilla_gorilla
ENSPCAG00000011020	GFI1	100	50.935	ENSHBUG00000011969	gfi1ab	100	50.935	Haplochromis_burtoni
ENSPCAG00000011020	GFI1	100	77.176	ENSHGLG00000008020	GFI1	100	76.706	Heterocephalus_glaber_female
ENSPCAG00000011020	GFI1	100	77.176	ENSHGLG00100000610	GFI1	100	76.706	Heterocephalus_glaber_male
ENSPCAG00000011020	GFI1	100	47.307	ENSHCOG00000019555	GFI1	100	47.307	Hippocampus_comes
ENSPCAG00000011020	GFI1	100	42.794	ENSHCOG00000008590	gfi1ab	100	41.463	Hippocampus_comes
ENSPCAG00000011020	GFI1	100	46.313	ENSIPUG00000013414	GFI1	100	46.313	Ictalurus_punctatus
ENSPCAG00000011020	GFI1	100	51.756	ENSIPUG00000010071	gfi1ab	87	51.756	Ictalurus_punctatus
ENSPCAG00000011020	GFI1	100	77.412	ENSSTOG00000014583	GFI1	100	76.706	Ictidomys_tridecemlineatus
ENSPCAG00000011020	GFI1	100	51.860	ENSKMAG00000003810	gfi1ab	100	51.860	Kryptolebias_marmoratus
ENSPCAG00000011020	GFI1	100	51.157	ENSLBEG00000027776	gfi1ab	100	51.157	Labrus_bergylta
ENSPCAG00000011020	GFI1	63	90.991	ENSLACG00000017590	-	97	90.991	Latimeria_chalumnae
ENSPCAG00000011020	GFI1	100	57.968	ENSLACG00000013362	GFI1	98	57.968	Latimeria_chalumnae
ENSPCAG00000011020	GFI1	100	55.963	ENSLOCG00000004711	gfi1ab	100	55.963	Lepisosteus_oculatus
ENSPCAG00000011020	GFI1	100	77.882	ENSLAFG00000018346	GFI1	100	76.706	Loxodonta_africana
ENSPCAG00000011020	GFI1	100	79.529	ENSMFAG00000045801	GFI1	100	78.824	Macaca_fascicularis
ENSPCAG00000011020	GFI1	100	79.529	ENSMNEG00000036338	GFI1	100	78.824	Macaca_nemestrina
ENSPCAG00000011020	GFI1	100	79.529	ENSMLEG00000036181	GFI1	100	78.824	Mandrillus_leucophaeus
ENSPCAG00000011020	GFI1	100	52.326	ENSMAMG00000008125	gfi1ab	100	52.326	Mastacembelus_armatus
ENSPCAG00000011020	GFI1	100	52.083	ENSMZEG00005009895	gfi1ab	100	52.083	Maylandia_zebra
ENSPCAG00000011020	GFI1	88	64.267	ENSMGAG00000008187	GFI1	100	64.267	Meleagris_gallopavo
ENSPCAG00000011020	GFI1	100	79.529	ENSMICG00000047208	GFI1	100	78.824	Microcebus_murinus
ENSPCAG00000011020	GFI1	100	48.157	ENSMMOG00000005556	gfi1ab	100	48.157	Mola_mola
ENSPCAG00000011020	GFI1	100	67.727	ENSMODG00000011802	GFI1	100	68.182	Monodelphis_domestica
ENSPCAG00000011020	GFI1	100	50.816	ENSMALG00000014672	gfi1ab	100	50.117	Monopterus_albus
ENSPCAG00000011020	GFI1	100	73.239	MGP_CAROLIEiJ_G0027508	Gfi1	84	100.000	Mus_caroli
ENSPCAG00000011020	GFI1	100	73.239	ENSMUSG00000029275	Gfi1	100	72.066	Mus_musculus
ENSPCAG00000011020	GFI1	100	72.535	MGP_PahariEiJ_G0017280	Gfi1	84	100.000	Mus_pahari
ENSPCAG00000011020	GFI1	100	72.535	MGP_SPRETEiJ_G0028507	Gfi1	100	71.596	Mus_spretus
ENSPCAG00000011020	GFI1	100	71.529	ENSMPUG00000004178	GFI1	97	71.529	Mustela_putorius_furo
ENSPCAG00000011020	GFI1	100	76.815	ENSMLUG00000015191	GFI1	97	76.815	Myotis_lucifugus
ENSPCAG00000011020	GFI1	100	50.339	ENSNBRG00000015774	gfi1ab	100	50.339	Neolamprologus_brichardi
ENSPCAG00000011020	GFI1	93	76.650	ENSNLEG00000010470	GFI1	97	75.888	Nomascus_leucogenys
ENSPCAG00000011020	GFI1	100	78.353	ENSOPRG00000001473	GFI1	100	77.412	Ochotona_princeps
ENSPCAG00000011020	GFI1	100	51.740	ENSONIG00000019246	gfi1ab	100	51.740	Oreochromis_niloticus
ENSPCAG00000011020	GFI1	98	76.630	ENSOCUG00000023553	GFI1	93	77.717	Oryctolagus_cuniculus
ENSPCAG00000011020	GFI1	100	50.000	ENSORLG00000005060	GFI1	100	50.000	Oryzias_latipes
ENSPCAG00000011020	GFI1	100	49.535	ENSORLG00000013806	gfi1ab	100	49.535	Oryzias_latipes
ENSPCAG00000011020	GFI1	100	44.289	ENSORLG00020002817	GFI1	85	50.158	Oryzias_latipes_hni
ENSPCAG00000011020	GFI1	100	50.000	ENSORLG00020001602	gfi1ab	100	50.000	Oryzias_latipes_hni
ENSPCAG00000011020	GFI1	100	49.188	ENSORLG00015006070	GFI1	100	49.188	Oryzias_latipes_hsok
ENSPCAG00000011020	GFI1	100	48.961	ENSOMEG00000016722	GFI1	100	48.961	Oryzias_melastigma
ENSPCAG00000011020	GFI1	100	66.353	ENSOGAG00000027913	GFI1	100	66.353	Otolemur_garnettii
ENSPCAG00000011020	GFI1	57	98.276	ENSOARG00000016329	GFI1	91	98.276	Ovis_aries
ENSPCAG00000011020	GFI1	100	65.647	ENSPPAG00000042186	GFI1	100	88.372	Pan_paniscus
ENSPCAG00000011020	GFI1	100	80.000	ENSPPRG00000007521	GFI1	100	80.000	Panthera_pardus
ENSPCAG00000011020	GFI1	100	79.294	ENSPTRG00000043053	GFI1	100	78.588	Pan_troglodytes
ENSPCAG00000011020	GFI1	100	79.529	ENSPANG00000016433	GFI1	100	78.824	Papio_anubis
ENSPCAG00000011020	GFI1	100	52.860	ENSPKIG00000004263	GFI1	100	52.860	Paramormyrops_kingsleyae
ENSPCAG00000011020	GFI1	88	63.200	ENSPSIG00000008734	GFI1	97	63.200	Pelodiscus_sinensis
ENSPCAG00000011020	GFI1	100	47.664	ENSPMGG00000012546	gfi1ab	100	47.664	Periophthalmus_magnuspinnatus
ENSPCAG00000011020	GFI1	100	68.822	ENSPCIG00000013728	GFI1	100	69.746	Phascolarctos_cinereus
ENSPCAG00000011020	GFI1	100	51.748	ENSPFOG00000023214	gfi1ab	100	51.748	Poecilia_formosa
ENSPCAG00000011020	GFI1	85	75.000	ENSPLAG00000010879	gfi1ab	98	75.000	Poecilia_latipinna
ENSPCAG00000011020	GFI1	100	50.461	ENSPLAG00000005376	GFI1	91	50.461	Poecilia_latipinna
ENSPCAG00000011020	GFI1	100	51.515	ENSPMEG00000013694	gfi1ab	100	51.515	Poecilia_mexicana
ENSPCAG00000011020	GFI1	100	50.231	ENSPMEG00000019299	GFI1	100	50.231	Poecilia_mexicana
ENSPCAG00000011020	GFI1	100	51.981	ENSPREG00000014097	gfi1ab	100	51.981	Poecilia_reticulata
ENSPCAG00000011020	GFI1	59	98.246	ENSPREG00000007997	GFI1	78	98.246	Poecilia_reticulata
ENSPCAG00000011020	GFI1	100	78.353	ENSPCOG00000020540	GFI1	100	77.647	Propithecus_coquereli
ENSPCAG00000011020	GFI1	100	76.000	ENSPVAG00000006928	GFI1	100	77.647	Pteropus_vampyrus
ENSPCAG00000011020	GFI1	100	51.852	ENSPNYG00000021183	gfi1ab	100	51.852	Pundamilia_nyererei
ENSPCAG00000011020	GFI1	100	43.779	ENSPNAG00000028014	GFI1	100	44.369	Pygocentrus_nattereri
ENSPCAG00000011020	GFI1	100	49.766	ENSPNAG00000027258	gfi1ab	100	49.766	Pygocentrus_nattereri
ENSPCAG00000011020	GFI1	100	73.474	ENSRNOG00000002042	Gfi1	100	71.831	Rattus_norvegicus
ENSPCAG00000011020	GFI1	100	80.471	ENSRBIG00000036467	GFI1	100	78.824	Rhinopithecus_bieti
ENSPCAG00000011020	GFI1	100	80.471	ENSRROG00000031687	GFI1	100	78.824	Rhinopithecus_roxellana
ENSPCAG00000011020	GFI1	100	77.882	ENSSBOG00000031300	GFI1	100	77.176	Saimiri_boliviensis_boliviensis
ENSPCAG00000011020	GFI1	100	53.811	ENSSFOG00015020295	gfi1	100	53.811	Scleropages_formosus
ENSPCAG00000011020	GFI1	100	52.448	ENSSMAG00000002782	gfi1ab	100	52.448	Scophthalmus_maximus
ENSPCAG00000011020	GFI1	100	50.580	ENSSDUG00000022410	gfi1ab	100	50.580	Seriola_dumerili
ENSPCAG00000011020	GFI1	100	50.812	ENSSLDG00000020163	gfi1ab	100	50.812	Seriola_lalandi_dorsalis
ENSPCAG00000011020	GFI1	81	78.125	ENSSPAG00000009140	gfi1ab	99	78.125	Stegastes_partitus
ENSPCAG00000011020	GFI1	100	79.294	ENSSSCG00000006902	GFI1	100	79.765	Sus_scrofa
ENSPCAG00000011020	GFI1	88	63.636	ENSTGUG00000006060	GFI1	100	63.636	Taeniopygia_guttata
ENSPCAG00000011020	GFI1	100	48.019	ENSTRUG00000000415	gfi1ab	100	48.019	Takifugu_rubripes
ENSPCAG00000011020	GFI1	100	50.117	ENSTNIG00000000651	gfi1ab	97	50.117	Tetraodon_nigroviridis
ENSPCAG00000011020	GFI1	100	77.412	ENSTTRG00000000082	GFI1	100	77.412	Tursiops_truncatus
ENSPCAG00000011020	GFI1	100	76.995	ENSUAMG00000021124	GFI1	91	76.995	Ursus_americanus
ENSPCAG00000011020	GFI1	100	55.399	ENSXETG00000023006	gfi1	98	55.399	Xenopus_tropicalis
ENSPCAG00000011020	GFI1	100	51.049	ENSXMAG00000010523	gfi1ab	100	51.049	Xiphophorus_maculatus
ENSPCAG00000011020	GFI1	100	43.351	ENSXMAG00000009274	GFI1	70	42.971	Xiphophorus_maculatus