EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000011040 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 32487 bases
Position: chrGeneScaffold_6028:79074-111560
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010463	CPSF_A	PF03178.15	5.5e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011204	DDB1-201	3402	-	ENSPCAP00000010463	1133 (aa)	-	UPI00018B0080

Gene Model

Click here to download ENSPCAG00000011040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011040	DDB1	85	99.403	ENSG00000167986	DDB1	100	94.000	Homo_sapiens
ENSPCAG00000011040	DDB1	82	89.425	ENSAPOG00000005036	ddb1	82	89.173	Acanthochromis_polyacanthus
ENSPCAG00000011040	DDB1	85	99.552	ENSAMEG00000016518	DDB1	85	99.552	Ailuropoda_melanoleuca
ENSPCAG00000011040	DDB1	70	89.567	ENSACIG00000020624	ddb1	82	89.567	Amphilophus_citrinellus
ENSPCAG00000011040	DDB1	85	88.955	ENSAOCG00000003066	ddb1	85	88.955	Amphiprion_ocellaris
ENSPCAG00000011040	DDB1	85	88.955	ENSAPEG00000000092	ddb1	85	88.955	Amphiprion_percula
ENSPCAG00000011040	DDB1	79	89.752	ENSATEG00000020571	ddb1	82	89.752	Anabas_testudineus
ENSPCAG00000011040	DDB1	83	96.434	ENSAPLG00000007174	DDB1	83	96.434	Anas_platyrhynchos
ENSPCAG00000011040	DDB1	85	96.567	ENSACAG00000017758	DDB1	85	96.567	Anolis_carolinensis
ENSPCAG00000011040	DDB1	85	99.403	ENSANAG00000021878	DDB1	85	99.403	Aotus_nancymaae
ENSPCAG00000011040	DDB1	85	89.403	ENSACLG00000012401	ddb1	85	89.403	Astatotilapia_calliptera
ENSPCAG00000011040	DDB1	85	99.254	ENSBTAG00000021569	DDB1	79	99.254	Bos_taurus
ENSPCAG00000011040	DDB1	79	42.731	WBGene00010890	ddb-1	78	42.731	Caenorhabditis_elegans
ENSPCAG00000011040	DDB1	85	99.403	ENSCJAG00000019319	DDB1	85	99.403	Callithrix_jacchus
ENSPCAG00000011040	DDB1	85	99.552	ENSCAFG00000016264	DDB1	85	99.552	Canis_familiaris
ENSPCAG00000011040	DDB1	79	99.008	ENSCAFG00020012722	DDB1	83	99.008	Canis_lupus_dingo
ENSPCAG00000011040	DDB1	85	99.254	ENSCHIG00000014969	DDB1	85	99.254	Capra_hircus
ENSPCAG00000011040	DDB1	85	98.955	ENSTSYG00000008027	DDB1	85	98.955	Carlito_syrichta
ENSPCAG00000011040	DDB1	83	98.955	ENSCAPG00000010786	DDB1	84	98.955	Cavia_aperea
ENSPCAG00000011040	DDB1	85	98.955	ENSCPOG00000009956	DDB1	85	98.955	Cavia_porcellus
ENSPCAG00000011040	DDB1	85	99.403	ENSCCAG00000035883	DDB1	85	99.403	Cebus_capucinus
ENSPCAG00000011040	DDB1	84	97.761	ENSCATG00000044495	DDB1	83	97.761	Cercocebus_atys
ENSPCAG00000011040	DDB1	85	99.104	ENSCLAG00000004126	DDB1	85	99.104	Chinchilla_lanigera
ENSPCAG00000011040	DDB1	85	99.403	ENSCSAG00000006392	DDB1	85	99.403	Chlorocebus_sabaeus
ENSPCAG00000011040	DDB1	69	92.614	ENSCHOG00000011377	DDB1	71	92.614	Choloepus_hoffmanni
ENSPCAG00000011040	DDB1	85	97.313	ENSCPBG00000017728	DDB1	85	97.313	Chrysemys_picta_bellii
ENSPCAG00000011040	DDB1	84	62.857	ENSCING00000007437	-	84	62.857	Ciona_intestinalis
ENSPCAG00000011040	DDB1	79	57.856	ENSCSAVG00000004783	-	89	54.043	Ciona_savignyi
ENSPCAG00000011040	DDB1	85	99.403	ENSCANG00000019948	DDB1	85	99.403	Colobus_angolensis_palliatus
ENSPCAG00000011040	DDB1	85	99.552	ENSCGRG00001016599	Ddb1	85	99.552	Cricetulus_griseus_chok1gshd
ENSPCAG00000011040	DDB1	85	99.552	ENSCGRG00000013427	Ddb1	85	99.552	Cricetulus_griseus_crigri
ENSPCAG00000011040	DDB1	78	89.002	ENSCSEG00000012499	ddb1	81	88.583	Cynoglossus_semilaevis
ENSPCAG00000011040	DDB1	79	89.055	ENSCVAG00000019531	ddb1	83	89.055	Cyprinodon_variegatus
ENSPCAG00000011040	DDB1	85	87.143	ENSDARG00000074431	ddb1	85	87.143	Danio_rerio
ENSPCAG00000011040	DDB1	79	99.008	ENSDNOG00000014884	DDB1	82	99.008	Dasypus_novemcinctus
ENSPCAG00000011040	DDB1	68	100.000	ENSDORG00000000127	Ddb1	82	100.000	Dipodomys_ordii
ENSPCAG00000011040	DDB1	84	62.018	FBgn0260962	pic	84	61.664	Drosophila_melanogaster
ENSPCAG00000011040	DDB1	58	100.000	ENSETEG00000001053	-	58	100.000	Echinops_telfairi
ENSPCAG00000011040	DDB1	62	80.668	ENSEBUG00000014593	ddb1	78	80.668	Eptatretus_burgeri
ENSPCAG00000011040	DDB1	85	99.254	ENSEASG00005008184	DDB1	85	99.254	Equus_asinus_asinus
ENSPCAG00000011040	DDB1	85	99.104	ENSECAG00000012136	DDB1	85	99.104	Equus_caballus
ENSPCAG00000011040	DDB1	63	97.500	ENSEEUG00000003194	DDB1	63	97.500	Erinaceus_europaeus
ENSPCAG00000011040	DDB1	85	89.104	ENSELUG00000023868	ddb1	85	89.104	Esox_lucius
ENSPCAG00000011040	DDB1	85	99.552	ENSFCAG00000029716	DDB1	85	99.552	Felis_catus
ENSPCAG00000011040	DDB1	85	96.434	ENSFALG00000011981	DDB1	85	96.434	Ficedula_albicollis
ENSPCAG00000011040	DDB1	85	98.955	ENSFDAG00000005128	DDB1	85	98.955	Fukomys_damarensis
ENSPCAG00000011040	DDB1	76	90.196	ENSFHEG00000022133	ddb1	81	90.196	Fundulus_heteroclitus
ENSPCAG00000011040	DDB1	73	82.667	ENSGMOG00000019386	ddb1	86	82.667	Gadus_morhua
ENSPCAG00000011040	DDB1	85	96.716	ENSGALG00000042333	DDB1	85	96.716	Gallus_gallus
ENSPCAG00000011040	DDB1	79	88.723	ENSGAFG00000013142	ddb1	83	88.723	Gambusia_affinis
ENSPCAG00000011040	DDB1	80	88.571	ENSGACG00000017182	ddb1	84	88.571	Gasterosteus_aculeatus
ENSPCAG00000011040	DDB1	79	97.164	ENSGAGG00000014124	DDB1	83	97.164	Gopherus_agassizii
ENSPCAG00000011040	DDB1	85	99.403	ENSGGOG00000004052	DDB1	85	99.403	Gorilla_gorilla
ENSPCAG00000011040	DDB1	85	89.403	ENSHBUG00000008873	ddb1	85	89.403	Haplochromis_burtoni
ENSPCAG00000011040	DDB1	85	98.806	ENSHGLG00000018430	DDB1	85	98.806	Heterocephalus_glaber_female
ENSPCAG00000011040	DDB1	85	97.164	ENSHGLG00100014475	DDB1	85	97.164	Heterocephalus_glaber_male
ENSPCAG00000011040	DDB1	79	88.944	ENSHCOG00000018670	ddb1	82	88.944	Hippocampus_comes
ENSPCAG00000011040	DDB1	85	88.806	ENSIPUG00000005612	DDB1	85	88.806	Ictalurus_punctatus
ENSPCAG00000011040	DDB1	85	99.403	ENSSTOG00000007552	DDB1	85	99.403	Ictidomys_tridecemlineatus
ENSPCAG00000011040	DDB1	85	99.104	ENSJJAG00000017769	Ddb1	85	99.104	Jaculus_jaculus
ENSPCAG00000011040	DDB1	79	89.055	ENSKMAG00000002315	ddb1	84	89.055	Kryptolebias_marmoratus
ENSPCAG00000011040	DDB1	69	89.764	ENSLBEG00000017065	ddb1	81	89.764	Labrus_bergylta
ENSPCAG00000011040	DDB1	85	91.964	ENSLACG00000017611	DDB1	85	91.964	Latimeria_chalumnae
ENSPCAG00000011040	DDB1	78	94.156	ENSLOCG00000000012	ddb1	86	94.156	Lepisosteus_oculatus
ENSPCAG00000011040	DDB1	85	99.403	ENSLAFG00000011513	DDB1	85	99.403	Loxodonta_africana
ENSPCAG00000011040	DDB1	85	99.403	ENSMFAG00000042035	DDB1	85	99.403	Macaca_fascicularis
ENSPCAG00000011040	DDB1	84	99.395	ENSMMUG00000002691	DDB1	100	94.000	Macaca_mulatta
ENSPCAG00000011040	DDB1	85	99.403	ENSMNEG00000031559	DDB1	85	99.403	Macaca_nemestrina
ENSPCAG00000011040	DDB1	85	99.403	ENSMLEG00000044136	DDB1	85	99.403	Mandrillus_leucophaeus
ENSPCAG00000011040	DDB1	85	89.403	ENSMAMG00000014372	ddb1	85	89.403	Mastacembelus_armatus
ENSPCAG00000011040	DDB1	85	89.254	ENSMZEG00005013835	ddb1	85	89.254	Maylandia_zebra
ENSPCAG00000011040	DDB1	79	96.137	ENSMGAG00000004990	DDB1	84	96.137	Meleagris_gallopavo
ENSPCAG00000011040	DDB1	85	99.552	ENSMAUG00000012926	Ddb1	85	99.552	Mesocricetus_auratus
ENSPCAG00000011040	DDB1	85	99.552	ENSMICG00000013703	DDB1	85	99.552	Microcebus_murinus
ENSPCAG00000011040	DDB1	85	99.552	ENSMOCG00000020499	Ddb1	85	99.552	Microtus_ochrogaster
ENSPCAG00000011040	DDB1	70	89.764	ENSMMOG00000001758	ddb1	82	89.764	Mola_mola
ENSPCAG00000011040	DDB1	85	96.047	ENSMODG00000020353	DDB1	85	96.047	Monodelphis_domestica
ENSPCAG00000011040	DDB1	85	89.403	ENSMALG00000014071	ddb1	85	89.403	Monopterus_albus
ENSPCAG00000011040	DDB1	85	99.403	MGP_CAROLIEiJ_G0022695	Ddb1	85	99.403	Mus_caroli
ENSPCAG00000011040	DDB1	85	99.254	ENSMUSG00000024740	Ddb1	85	99.254	Mus_musculus
ENSPCAG00000011040	DDB1	85	99.403	MGP_PahariEiJ_G0014189	Ddb1	85	99.403	Mus_pahari
ENSPCAG00000011040	DDB1	85	99.403	MGP_SPRETEiJ_G0023609	Ddb1	85	99.403	Mus_spretus
ENSPCAG00000011040	DDB1	85	93.871	ENSMPUG00000014200	DDB1	84	93.871	Mustela_putorius_furo
ENSPCAG00000011040	DDB1	85	99.104	ENSMLUG00000013232	DDB1	85	99.104	Myotis_lucifugus
ENSPCAG00000011040	DDB1	85	99.104	ENSNGAG00000009384	Ddb1	85	99.104	Nannospalax_galili
ENSPCAG00000011040	DDB1	85	89.552	ENSNBRG00000019581	ddb1	85	89.552	Neolamprologus_brichardi
ENSPCAG00000011040	DDB1	84	98.657	ENSNLEG00000002022	DDB1	83	98.657	Nomascus_leucogenys
ENSPCAG00000011040	DDB1	74	99.296	ENSMEUG00000001099	DDB1	75	99.296	Notamacropus_eugenii
ENSPCAG00000011040	DDB1	73	100.000	ENSOPRG00000008254	DDB1	73	100.000	Ochotona_princeps
ENSPCAG00000011040	DDB1	85	98.806	ENSODEG00000002419	DDB1	85	98.806	Octodon_degus
ENSPCAG00000011040	DDB1	85	89.403	ENSONIG00000005804	ddb1	85	89.403	Oreochromis_niloticus
ENSPCAG00000011040	DDB1	79	97.761	ENSOANG00000004897	DDB1	87	97.761	Ornithorhynchus_anatinus
ENSPCAG00000011040	DDB1	85	99.403	ENSOCUG00000001667	DDB1	85	99.403	Oryctolagus_cuniculus
ENSPCAG00000011040	DDB1	80	87.440	ENSORLG00000001399	ddb1	84	87.440	Oryzias_latipes
ENSPCAG00000011040	DDB1	80	87.440	ENSORLG00020001277	ddb1	84	87.440	Oryzias_latipes_hni
ENSPCAG00000011040	DDB1	79	89.256	ENSORLG00015002080	ddb1	86	89.256	Oryzias_latipes_hsok
ENSPCAG00000011040	DDB1	81	86.922	ENSOMEG00000006181	ddb1	83	86.922	Oryzias_melastigma
ENSPCAG00000011040	DDB1	85	99.254	ENSOGAG00000016103	DDB1	85	99.254	Otolemur_garnettii
ENSPCAG00000011040	DDB1	83	99.234	ENSOARG00000011716	DDB1	82	99.234	Ovis_aries
ENSPCAG00000011040	DDB1	85	99.403	ENSPPAG00000035343	DDB1	85	99.403	Pan_paniscus
ENSPCAG00000011040	DDB1	85	99.552	ENSPPRG00000013300	DDB1	85	99.552	Panthera_pardus
ENSPCAG00000011040	DDB1	83	99.552	ENSPTIG00000006909	DDB1	83	99.552	Panthera_tigris_altaica
ENSPCAG00000011040	DDB1	85	99.403	ENSPTRG00000003737	DDB1	85	99.403	Pan_troglodytes
ENSPCAG00000011040	DDB1	85	99.403	ENSPANG00000000242	DDB1	85	99.403	Papio_anubis
ENSPCAG00000011040	DDB1	79	89.055	ENSPKIG00000019213	ddb1	79	89.055	Paramormyrops_kingsleyae
ENSPCAG00000011040	DDB1	83	96.429	ENSPSIG00000013275	DDB1	84	96.429	Pelodiscus_sinensis
ENSPCAG00000011040	DDB1	70	89.567	ENSPMGG00000021179	ddb1	82	89.567	Periophthalmus_magnuspinnatus
ENSPCAG00000011040	DDB1	85	99.552	ENSPEMG00000012241	Ddb1	85	99.552	Peromyscus_maniculatus_bairdii
ENSPCAG00000011040	DDB1	74	85.035	ENSPMAG00000008479	ddb1	83	85.035	Petromyzon_marinus
ENSPCAG00000011040	DDB1	85	98.806	ENSPCIG00000002643	DDB1	85	98.806	Phascolarctos_cinereus
ENSPCAG00000011040	DDB1	85	88.571	ENSPFOG00000002768	ddb1	85	88.571	Poecilia_formosa
ENSPCAG00000011040	DDB1	85	88.571	ENSPLAG00000017227	ddb1	85	88.571	Poecilia_latipinna
ENSPCAG00000011040	DDB1	85	88.571	ENSPMEG00000011398	ddb1	85	88.571	Poecilia_mexicana
ENSPCAG00000011040	DDB1	79	88.926	ENSPREG00000004440	ddb1	82	88.926	Poecilia_reticulata
ENSPCAG00000011040	DDB1	85	92.308	ENSPPYG00000003193	DDB1	85	92.308	Pongo_abelii
ENSPCAG00000011040	DDB1	85	97.024	ENSPCOG00000015176	DDB1	85	97.024	Propithecus_coquereli
ENSPCAG00000011040	DDB1	85	99.552	ENSPVAG00000003847	DDB1	85	99.552	Pteropus_vampyrus
ENSPCAG00000011040	DDB1	79	89.221	ENSPNAG00000006635	ddb1	81	89.221	Pygocentrus_nattereri
ENSPCAG00000011040	DDB1	85	99.403	ENSRNOG00000020715	Ddb1	85	99.403	Rattus_norvegicus
ENSPCAG00000011040	DDB1	85	99.403	ENSRBIG00000033611	DDB1	85	99.403	Rhinopithecus_bieti
ENSPCAG00000011040	DDB1	85	99.403	ENSRROG00000041407	DDB1	85	99.403	Rhinopithecus_roxellana
ENSPCAG00000011040	DDB1	85	99.254	ENSSBOG00000019775	DDB1	85	99.254	Saimiri_boliviensis_boliviensis
ENSPCAG00000011040	DDB1	79	98.955	ENSSHAG00000011600	DDB1	84	98.955	Sarcophilus_harrisii
ENSPCAG00000011040	DDB1	79	89.439	ENSSFOG00015011151	ddb1	81	89.439	Scleropages_formosus
ENSPCAG00000011040	DDB1	85	88.955	ENSSMAG00000009495	ddb1	85	88.955	Scophthalmus_maximus
ENSPCAG00000011040	DDB1	85	89.254	ENSSDUG00000004642	ddb1	85	89.254	Seriola_dumerili
ENSPCAG00000011040	DDB1	85	89.254	ENSSLDG00000015804	ddb1	85	89.254	Seriola_lalandi_dorsalis
ENSPCAG00000011040	DDB1	85	96.866	ENSSPUG00000019338	DDB1	85	96.866	Sphenodon_punctatus
ENSPCAG00000011040	DDB1	79	89.421	ENSSPAG00000009888	ddb1	83	89.421	Stegastes_partitus
ENSPCAG00000011040	DDB1	85	97.761	ENSSSCG00000013094	DDB1	85	97.761	Sus_scrofa
ENSPCAG00000011040	DDB1	85	95.970	ENSTGUG00000006414	DDB1	85	95.970	Taeniopygia_guttata
ENSPCAG00000011040	DDB1	79	88.571	ENSTRUG00000016682	ddb1	82	88.571	Takifugu_rubripes
ENSPCAG00000011040	DDB1	79	81.994	ENSTNIG00000009565	ddb1	89	81.994	Tetraodon_nigroviridis
ENSPCAG00000011040	DDB1	71	100.000	ENSTTRG00000011055	DDB1	72	100.000	Tursiops_truncatus
ENSPCAG00000011040	DDB1	79	99.008	ENSUAMG00000017793	DDB1	78	99.008	Ursus_americanus
ENSPCAG00000011040	DDB1	79	99.008	ENSUMAG00000011788	DDB1	82	99.008	Ursus_maritimus
ENSPCAG00000011040	DDB1	74	100.000	ENSVPAG00000007963	DDB1	76	100.000	Vicugna_pacos
ENSPCAG00000011040	DDB1	85	99.552	ENSVVUG00000004987	DDB1	91	99.552	Vulpes_vulpes
ENSPCAG00000011040	DDB1	85	91.988	ENSXETG00000008820	ddb1	85	91.988	Xenopus_tropicalis
ENSPCAG00000011040	DDB1	70	88.583	ENSXCOG00000013956	ddb1	82	88.583	Xiphophorus_couchianus
ENSPCAG00000011040	DDB1	79	88.723	ENSXMAG00000000022	ddb1	83	88.723	Xiphophorus_maculatus