EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000011582 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 86591 bases
Position: chrGeneScaffold_569:1562-88152
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010951	RNA_pol_Rpb1_5	PF04998.17	1.3e-76	1	1
ENSPCAP00000010951	RNA_pol_Rpb1_4	PF05000.17	6.7e-24	1	1
ENSPCAP00000010951	RNA_pol_Rpb1_2	PF00623.20	6.4e-70	1	1
ENSPCAP00000010951	RNA_pol_Rpb1_3	PF04983.18	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011727	POLR1A-201	5139	-	ENSPCAP00000010951	1712 (aa)	-	UPI00018B08D4

Gene Model

Click here to download ENSPCAG00000011582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011582	POLR1A	92	96.000	ENSG00000068654	POLR1A	92	96.000	Homo_sapiens
ENSPCAG00000011582	POLR1A	64	60.512	ENSAPOG00000017945	polr1a	99	60.265	Acanthochromis_polyacanthus
ENSPCAG00000011582	POLR1A	92	88.000	ENSAMEG00000005807	POLR1A	93	88.000	Ailuropoda_melanoleuca
ENSPCAG00000011582	POLR1A	91	57.360	ENSACIG00000022147	polr1a	90	74.145	Amphilophus_citrinellus
ENSPCAG00000011582	POLR1A	87	76.606	ENSAOCG00000017336	polr1a	90	77.064	Amphiprion_ocellaris
ENSPCAG00000011582	POLR1A	85	66.000	ENSAPEG00000016105	polr1a	86	78.009	Amphiprion_percula
ENSPCAG00000011582	POLR1A	87	65.944	ENSATEG00000016773	polr1a	91	65.944	Anabas_testudineus
ENSPCAG00000011582	POLR1A	76	77.586	ENSAPLG00000013871	POLR1A	89	77.586	Anas_platyrhynchos
ENSPCAG00000011582	POLR1A	87	68.000	ENSACAG00000012141	POLR1A	87	68.000	Anolis_carolinensis
ENSPCAG00000011582	POLR1A	92	96.000	ENSANAG00000033927	POLR1A	92	96.000	Aotus_nancymaae
ENSPCAG00000011582	POLR1A	95	53.042	ENSACLG00000020541	polr1a	94	52.448	Astatotilapia_calliptera
ENSPCAG00000011582	POLR1A	92	100.000	ENSBTAG00000006481	POLR1A	92	100.000	Bos_taurus
ENSPCAG00000011582	POLR1A	75	40.783	WBGene00012999	rpoa-1	71	40.783	Caenorhabditis_elegans
ENSPCAG00000011582	POLR1A	92	96.000	ENSCJAG00000019547	POLR1A	92	96.000	Callithrix_jacchus
ENSPCAG00000011582	POLR1A	92	100.000	ENSCAFG00000007613	POLR1A	92	100.000	Canis_familiaris
ENSPCAG00000011582	POLR1A	92	100.000	ENSCAFG00020014752	POLR1A	92	100.000	Canis_lupus_dingo
ENSPCAG00000011582	POLR1A	88	100.000	ENSCHIG00000018204	POLR1A	89	100.000	Capra_hircus
ENSPCAG00000011582	POLR1A	91	83.333	ENSTSYG00000002761	POLR1A	92	88.000	Carlito_syrichta
ENSPCAG00000011582	POLR1A	91	83.962	ENSCAPG00000010132	POLR1A	93	84.112	Cavia_aperea
ENSPCAG00000011582	POLR1A	92	96.000	ENSCPOG00000012350	POLR1A	92	96.000	Cavia_porcellus
ENSPCAG00000011582	POLR1A	92	96.000	ENSCCAG00000019839	POLR1A	92	96.000	Cebus_capucinus
ENSPCAG00000011582	POLR1A	88	96.000	ENSCATG00000029786	POLR1A	88	96.000	Cercocebus_atys
ENSPCAG00000011582	POLR1A	92	100.000	ENSCLAG00000005187	POLR1A	92	100.000	Chinchilla_lanigera
ENSPCAG00000011582	POLR1A	88	96.000	ENSCSAG00000016251	POLR1A	88	96.000	Chlorocebus_sabaeus
ENSPCAG00000011582	POLR1A	82	92.308	ENSCPBG00000001115	POLR1A	83	92.308	Chrysemys_picta_bellii
ENSPCAG00000011582	POLR1A	70	63.158	ENSCSAVG00000007184	-	70	63.158	Ciona_savignyi
ENSPCAG00000011582	POLR1A	88	96.000	ENSCANG00000031785	POLR1A	90	96.000	Colobus_angolensis_palliatus
ENSPCAG00000011582	POLR1A	88	88.000	ENSCGRG00001006651	Polr1a	92	88.000	Cricetulus_griseus_chok1gshd
ENSPCAG00000011582	POLR1A	56	82.000	ENSCGRG00000010834	Polr1a	87	82.873	Cricetulus_griseus_crigri
ENSPCAG00000011582	POLR1A	87	70.862	ENSCSEG00000020190	polr1a	90	70.862	Cynoglossus_semilaevis
ENSPCAG00000011582	POLR1A	87	66.047	ENSCVAG00000020941	polr1a	87	66.047	Cyprinodon_variegatus
ENSPCAG00000011582	POLR1A	91	64.907	ENSDARG00000098375	polr1a	91	64.907	Danio_rerio
ENSPCAG00000011582	POLR1A	92	92.000	ENSDNOG00000010829	POLR1A	92	92.000	Dasypus_novemcinctus
ENSPCAG00000011582	POLR1A	92	92.000	ENSDORG00000008298	Polr1a	92	92.000	Dipodomys_ordii
ENSPCAG00000011582	POLR1A	79	47.833	FBgn0019938	RpI1	86	42.798	Drosophila_melanogaster
ENSPCAG00000011582	POLR1A	63	96.000	ENSETEG00000000412	-	63	96.000	Echinops_telfairi
ENSPCAG00000011582	POLR1A	82	47.350	ENSEBUG00000005667	-	95	47.350	Eptatretus_burgeri
ENSPCAG00000011582	POLR1A	88	100.000	ENSEASG00005001625	POLR1A	92	100.000	Equus_asinus_asinus
ENSPCAG00000011582	POLR1A	92	100.000	ENSECAG00000030510	-	92	100.000	Equus_caballus
ENSPCAG00000011582	POLR1A	92	100.000	ENSECAG00000010092	POLR1A	92	100.000	Equus_caballus
ENSPCAG00000011582	POLR1A	92	100.000	ENSECAG00000036306	-	92	100.000	Equus_caballus
ENSPCAG00000011582	POLR1A	72	96.000	ENSEEUG00000000676	POLR1A	72	96.000	Erinaceus_europaeus
ENSPCAG00000011582	POLR1A	87	66.407	ENSELUG00000012769	polr1a	90	66.407	Esox_lucius
ENSPCAG00000011582	POLR1A	92	92.000	ENSFCAG00000008966	POLR1A	92	92.000	Felis_catus
ENSPCAG00000011582	POLR1A	91	68.682	ENSFALG00000010082	POLR1A	92	68.682	Ficedula_albicollis
ENSPCAG00000011582	POLR1A	92	96.000	ENSFDAG00000013726	POLR1A	92	96.000	Fukomys_damarensis
ENSPCAG00000011582	POLR1A	85	63.876	ENSFHEG00000005996	polr1a	86	64.651	Fundulus_heteroclitus
ENSPCAG00000011582	POLR1A	87	56.672	ENSGMOG00000002230	polr1a	85	57.282	Gadus_morhua
ENSPCAG00000011582	POLR1A	80	68.885	ENSGALG00000038160	-	88	68.885	Gallus_gallus
ENSPCAG00000011582	POLR1A	87	63.876	ENSGAFG00000015266	polr1a	86	63.876	Gambusia_affinis
ENSPCAG00000011582	POLR1A	91	58.518	ENSGACG00000018791	polr1a	87	65.070	Gasterosteus_aculeatus
ENSPCAG00000011582	POLR1A	82	75.045	ENSGAGG00000004984	-	88	84.663	Gopherus_agassizii
ENSPCAG00000011582	POLR1A	92	96.000	ENSGGOG00000001788	POLR1A	88	96.000	Gorilla_gorilla
ENSPCAG00000011582	POLR1A	81	64.706	ENSHBUG00000020021	polr1a	92	64.964	Haplochromis_burtoni
ENSPCAG00000011582	POLR1A	92	100.000	ENSHGLG00000006334	POLR1A	92	100.000	Heterocephalus_glaber_female
ENSPCAG00000011582	POLR1A	92	100.000	ENSHGLG00100006614	POLR1A	92	100.000	Heterocephalus_glaber_male
ENSPCAG00000011582	POLR1A	89	58.103	ENSHCOG00000003345	polr1a	86	76.224	Hippocampus_comes
ENSPCAG00000011582	POLR1A	91	64.778	ENSIPUG00000013174	polr1a	91	65.015	Ictalurus_punctatus
ENSPCAG00000011582	POLR1A	91	84.639	ENSSTOG00000012580	POLR1A	91	84.783	Ictidomys_tridecemlineatus
ENSPCAG00000011582	POLR1A	91	84.953	ENSJJAG00000013113	Polr1a	92	85.093	Jaculus_jaculus
ENSPCAG00000011582	POLR1A	91	64.852	ENSKMAG00000007399	polr1a	91	64.852	Kryptolebias_marmoratus
ENSPCAG00000011582	POLR1A	85	77.273	ENSLBEG00000015401	polr1a	89	77.273	Labrus_bergylta
ENSPCAG00000011582	POLR1A	88	78.755	ENSLOCG00000010881	polr1a	86	78.755	Lepisosteus_oculatus
ENSPCAG00000011582	POLR1A	92	100.000	ENSLAFG00000014948	POLR1A	92	100.000	Loxodonta_africana
ENSPCAG00000011582	POLR1A	88	96.000	ENSMFAG00000046097	POLR1A	88	96.000	Macaca_fascicularis
ENSPCAG00000011582	POLR1A	88	96.000	ENSMMUG00000015815	POLR1A	88	96.000	Macaca_mulatta
ENSPCAG00000011582	POLR1A	88	96.000	ENSMNEG00000043313	POLR1A	88	96.000	Macaca_nemestrina
ENSPCAG00000011582	POLR1A	88	96.000	ENSMLEG00000042428	POLR1A	88	96.000	Mandrillus_leucophaeus
ENSPCAG00000011582	POLR1A	91	67.652	ENSMAMG00000016565	polr1a	91	67.652	Mastacembelus_armatus
ENSPCAG00000011582	POLR1A	95	55.993	ENSMZEG00005004915	polr1a	91	64.915	Maylandia_zebra
ENSPCAG00000011582	POLR1A	87	69.585	ENSMGAG00000013111	POLR1A	87	69.585	Meleagris_gallopavo
ENSPCAG00000011582	POLR1A	88	81.803	ENSMAUG00000008497	Polr1a	96	81.803	Mesocricetus_auratus
ENSPCAG00000011582	POLR1A	92	100.000	ENSMICG00000000757	POLR1A	92	100.000	Microcebus_murinus
ENSPCAG00000011582	POLR1A	92	88.000	ENSMOCG00000000122	Polr1a	92	88.000	Microtus_ochrogaster
ENSPCAG00000011582	POLR1A	91	64.798	ENSMMOG00000010216	polr1a	91	64.798	Mola_mola
ENSPCAG00000011582	POLR1A	87	77.709	ENSMODG00000009335	POLR1A	87	77.864	Monodelphis_domestica
ENSPCAG00000011582	POLR1A	95	55.781	ENSMALG00000013363	polr1a	100	55.302	Monopterus_albus
ENSPCAG00000011582	POLR1A	91	81.048	MGP_CAROLIEiJ_G0028494	Polr1a	92	88.000	Mus_caroli
ENSPCAG00000011582	POLR1A	91	81.202	ENSMUSG00000049553	Polr1a	92	88.000	Mus_musculus
ENSPCAG00000011582	POLR1A	91	81.182	MGP_PahariEiJ_G0022230	Polr1a	92	88.000	Mus_pahari
ENSPCAG00000011582	POLR1A	91	81.202	MGP_SPRETEiJ_G0029499	Polr1a	93	88.000	Mus_spretus
ENSPCAG00000011582	POLR1A	92	100.000	ENSMPUG00000009135	POLR1A	92	100.000	Mustela_putorius_furo
ENSPCAG00000011582	POLR1A	92	100.000	ENSMLUG00000015723	POLR1A	92	100.000	Myotis_lucifugus
ENSPCAG00000011582	POLR1A	91	83.048	ENSNGAG00000017907	Polr1a	92	88.000	Nannospalax_galili
ENSPCAG00000011582	POLR1A	95	55.931	ENSNBRG00000000519	polr1a	91	64.915	Neolamprologus_brichardi
ENSPCAG00000011582	POLR1A	88	96.000	ENSNLEG00000002264	POLR1A	88	96.000	Nomascus_leucogenys
ENSPCAG00000011582	POLR1A	66	86.594	ENSMEUG00000011665	-	66	86.594	Notamacropus_eugenii
ENSPCAG00000011582	POLR1A	84	96.000	ENSOPRG00000008269	POLR1A	85	96.000	Ochotona_princeps
ENSPCAG00000011582	POLR1A	92	96.000	ENSODEG00000003542	POLR1A	92	96.000	Octodon_degus
ENSPCAG00000011582	POLR1A	91	64.352	ENSONIG00000015895	polr1a	91	64.352	Oreochromis_niloticus
ENSPCAG00000011582	POLR1A	92	96.000	ENSOCUG00000010138	POLR1A	92	96.000	Oryctolagus_cuniculus
ENSPCAG00000011582	POLR1A	91	64.760	ENSORLG00000008753	polr1a	90	64.760	Oryzias_latipes
ENSPCAG00000011582	POLR1A	87	76.484	ENSORLG00020020726	polr1a	87	76.484	Oryzias_latipes_hni
ENSPCAG00000011582	POLR1A	86	67.143	ENSORLG00015016071	polr1a	88	66.667	Oryzias_latipes_hsok
ENSPCAG00000011582	POLR1A	88	100.000	ENSOGAG00000004031	POLR1A	88	100.000	Otolemur_garnettii
ENSPCAG00000011582	POLR1A	92	100.000	ENSOARG00000020601	POLR1A	92	100.000	Ovis_aries
ENSPCAG00000011582	POLR1A	92	96.000	ENSPPAG00000042450	POLR1A	92	96.000	Pan_paniscus
ENSPCAG00000011582	POLR1A	92	92.000	ENSPPRG00000006702	POLR1A	92	92.000	Panthera_pardus
ENSPCAG00000011582	POLR1A	92	92.000	ENSPTIG00000018783	POLR1A	92	92.000	Panthera_tigris_altaica
ENSPCAG00000011582	POLR1A	92	96.000	ENSPTRG00000012147	POLR1A	92	96.000	Pan_troglodytes
ENSPCAG00000011582	POLR1A	88	96.000	ENSPANG00000025908	POLR1A	88	96.000	Papio_anubis
ENSPCAG00000011582	POLR1A	86	76.078	ENSPKIG00000005468	polr1a	90	76.078	Paramormyrops_kingsleyae
ENSPCAG00000011582	POLR1A	55	72.549	ENSPSIG00000009321	-	88	72.549	Pelodiscus_sinensis
ENSPCAG00000011582	POLR1A	51	60.208	ENSPMGG00000009718	polr1a	87	60.208	Periophthalmus_magnuspinnatus
ENSPCAG00000011582	POLR1A	92	88.000	ENSPEMG00000022224	Polr1a	92	88.000	Peromyscus_maniculatus_bairdii
ENSPCAG00000011582	POLR1A	82	97.436	ENSPCIG00000004222	POLR1A	86	97.436	Phascolarctos_cinereus
ENSPCAG00000011582	POLR1A	91	65.070	ENSPFOG00000005025	polr1a	91	65.070	Poecilia_formosa
ENSPCAG00000011582	POLR1A	91	65.379	ENSPLAG00000021389	polr1a	91	65.379	Poecilia_latipinna
ENSPCAG00000011582	POLR1A	91	62.053	ENSPMEG00000006463	polr1a	91	63.297	Poecilia_mexicana
ENSPCAG00000011582	POLR1A	91	65.070	ENSPREG00000002389	polr1a	91	65.070	Poecilia_reticulata
ENSPCAG00000011582	POLR1A	92	92.000	ENSPPYG00000012217	POLR1A	88	92.000	Pongo_abelii
ENSPCAG00000011582	POLR1A	92	100.000	ENSPCOG00000026987	POLR1A	92	100.000	Propithecus_coquereli
ENSPCAG00000011582	POLR1A	85	100.000	ENSPVAG00000012674	POLR1A	85	100.000	Pteropus_vampyrus
ENSPCAG00000011582	POLR1A	95	55.993	ENSPNYG00000000026	polr1a	91	64.915	Pundamilia_nyererei
ENSPCAG00000011582	POLR1A	87	74.514	ENSPNAG00000019223	polr1a	89	74.514	Pygocentrus_nattereri
ENSPCAG00000011582	POLR1A	92	88.000	ENSRNOG00000009545	Polr1a	92	88.000	Rattus_norvegicus
ENSPCAG00000011582	POLR1A	88	96.000	ENSRBIG00000028335	POLR1A	88	96.000	Rhinopithecus_bieti
ENSPCAG00000011582	POLR1A	88	96.000	ENSRROG00000031473	POLR1A	89	96.000	Rhinopithecus_roxellana
ENSPCAG00000011582	POLR1A	67	48.961	YOR341W	RPA190	63	48.961	Saccharomyces_cerevisiae
ENSPCAG00000011582	POLR1A	92	96.000	ENSSBOG00000030262	POLR1A	92	96.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000011582	POLR1A	87	73.893	ENSSHAG00000014739	POLR1A	87	73.893	Sarcophilus_harrisii
ENSPCAG00000011582	POLR1A	95	57.143	ENSSFOG00015019716	polr1a	91	68.692	Scleropages_formosus
ENSPCAG00000011582	POLR1A	91	65.581	ENSSMAG00000014342	polr1a	91	65.581	Scophthalmus_maximus
ENSPCAG00000011582	POLR1A	91	66.151	ENSSDUG00000014631	polr1a	91	66.151	Seriola_dumerili
ENSPCAG00000011582	POLR1A	86	77.471	ENSSLDG00000024095	polr1a	89	77.471	Seriola_lalandi_dorsalis
ENSPCAG00000011582	POLR1A	68	97.436	ENSSARG00000003136	-	69	97.436	Sorex_araneus
ENSPCAG00000011582	POLR1A	87	69.612	ENSSPUG00000004215	POLR1A	87	69.612	Sphenodon_punctatus
ENSPCAG00000011582	POLR1A	60	65.068	ENSSPAG00000016341	polr1a	90	64.114	Stegastes_partitus
ENSPCAG00000011582	POLR1A	75	100.000	ENSSSCG00000008226	POLR1A	90	100.000	Sus_scrofa
ENSPCAG00000011582	POLR1A	91	68.006	ENSTGUG00000010704	POLR1A	92	68.006	Taeniopygia_guttata
ENSPCAG00000011582	POLR1A	91	63.043	ENSTRUG00000002210	polr1a	83	71.739	Takifugu_rubripes
ENSPCAG00000011582	POLR1A	87	57.492	ENSTNIG00000010116	polr1a	87	57.492	Tetraodon_nigroviridis
ENSPCAG00000011582	POLR1A	65	100.000	ENSTBEG00000008646	POLR1A	66	100.000	Tupaia_belangeri
ENSPCAG00000011582	POLR1A	92	100.000	ENSTTRG00000008597	POLR1A	92	100.000	Tursiops_truncatus
ENSPCAG00000011582	POLR1A	65	92.462	ENSUAMG00000012158	-	90	92.462	Ursus_americanus
ENSPCAG00000011582	POLR1A	92	96.000	ENSUMAG00000006700	POLR1A	93	96.000	Ursus_maritimus
ENSPCAG00000011582	POLR1A	92	100.000	ENSVVUG00000001245	POLR1A	93	100.000	Vulpes_vulpes
ENSPCAG00000011582	POLR1A	91	68.721	ENSXETG00000001952	polr1a	91	68.934	Xenopus_tropicalis
ENSPCAG00000011582	POLR1A	91	64.087	ENSXMAG00000004032	polr1a	91	64.241	Xiphophorus_maculatus