EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPCAG00000011671 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Minus strand
Length
117748 bases
Position
chrGeneScaffold_3593:1812-119559
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58110
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58210
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58310
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58410
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58510
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58610
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58710
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58810
ENSPCAP00000010913zf-C2H2PF00096.263.3e-58910
ENSPCAP00000010913zf-C2H2PF00096.263.3e-581010
ENSPCAP00000010913zf-metPF12874.71.4e-1713
ENSPCAP00000010913zf-metPF12874.71.4e-1723
ENSPCAP00000010913zf-metPF12874.71.4e-1733
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000011687PRDM5-2011800-ENSPCAP00000010913599 (aa)-UPI00018AFA81
Gene Model
Click here to download ENSPCAG00000011671's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011671's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPCAG00000011671PRDM57942.236ENSPCAG00000000195ZKSCAN45442.236
ENSPCAG00000011671PRDM57741.126ENSPCAG00000000878ZNF5826541.126
ENSPCAG00000011671PRDM57337.500ENSPCAG00000014001ZNF4085637.500
ENSPCAG00000011671PRDM57642.408ENSPCAG00000015262ZFP69B6342.408
ENSPCAG00000011671PRDM57634.667ENSPCAG00000016959ZNF5267431.474
ENSPCAG00000011671PRDM57734.474ENSPCAG00000005203ZNF2356038.261
ENSPCAG00000011671PRDM57736.413ENSPCAG00000012543ZNF2348436.413
ENSPCAG00000011671PRDM57732.035ENSPCAG00000004217-8832.035
ENSPCAG00000011671PRDM56043.137ENSPCAG00000011934SNAI15043.137
ENSPCAG00000011671PRDM58038.312ENSPCAG00000009106-7938.312
ENSPCAG00000011671PRDM56832.248ENSPCAG00000005270-8034.024
ENSPCAG00000011671PRDM58341.989ENSPCAG00000016939ZNF26841.989
ENSPCAG00000011671PRDM56040.876ENSPCAG00000001788-5540.876
ENSPCAG00000011671PRDM57735.533ENSPCAG00000007544GZF15434.071
ENSPCAG00000011671PRDM57736.555ENSPCAG00000008589ZNF6287936.820
ENSPCAG00000011671PRDM57734.314ENSPCAG00000007476-9434.314
ENSPCAG00000011671PRDM57733.632ENSPCAG00000000862-8933.632
ENSPCAG00000011671PRDM59441.420ENSPCAG00000016123-6041.420
ENSPCAG00000011671PRDM57738.393ENSPCAG00000001613-6038.393
ENSPCAG00000011671PRDM57741.553ENSPCAG00000007561ZFP17941.553
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000011671PRDM510090.484ENSG00000138738PRDM59590.484Homo_sapiens
ENSPCAG00000011671PRDM510071.333ENSAPOG00000023220prdm59571.333Acanthochromis_polyacanthus
ENSPCAG00000011671PRDM59685.417ENSAMEG00000003050PRDM510085.590Ailuropoda_melanoleuca
ENSPCAG00000011671PRDM510069.833ENSACIG00000000406prdm59570.000Amphilophus_citrinellus
ENSPCAG00000011671PRDM510071.500ENSAOCG00000014806prdm59571.500Amphiprion_ocellaris
ENSPCAG00000011671PRDM510062.480ENSAPEG00000016846prdm59563.607Amphiprion_percula
ENSPCAG00000011671PRDM510073.167ENSATEG00000013829prdm59573.333Anabas_testudineus
ENSPCAG00000011671PRDM510078.904ENSAPLG00000013828PRDM510078.904Anas_platyrhynchos
ENSPCAG00000011671PRDM510073.456ENSACAG00000012999PRDM59573.456Anolis_carolinensis
ENSPCAG00000011671PRDM59698.000ENSANAG00000027411PRDM58898.000Aotus_nancymaae
ENSPCAG00000011671PRDM510071.833ENSACLG00000017996prdm59571.833Astatotilapia_calliptera
ENSPCAG00000011671PRDM58972.439ENSAMXG00000041864prdm59972.998Astyanax_mexicanus
ENSPCAG00000011671PRDM510089.816ENSBTAG00000012111PRDM59589.816Bos_taurus
ENSPCAG00000011671PRDM59697.333ENSCJAG00000003133PRDM58897.333Callithrix_jacchus
ENSPCAG00000011671PRDM59779.138ENSCAFG00000004179PRDM510079.138Canis_familiaris
ENSPCAG00000011671PRDM510090.818ENSCAFG00020017685PRDM59590.818Canis_lupus_dingo
ENSPCAG00000011671PRDM510087.980ENSCHIG00000018772PRDM59587.980Capra_hircus
ENSPCAG00000011671PRDM59988.991ENSTSYG00000009630PRDM59588.991Carlito_syrichta
ENSPCAG00000011671PRDM59597.333ENSCAPG00000015217PRDM510097.333Cavia_aperea
ENSPCAG00000011671PRDM59597.333ENSCPOG00000012883PRDM510097.333Cavia_porcellus
ENSPCAG00000011671PRDM59698.000ENSCCAG00000023157PRDM58898.000Cebus_capucinus
ENSPCAG00000011671PRDM59698.000ENSCATG00000042510PRDM58898.000Cercocebus_atys
ENSPCAG00000011671PRDM59597.333ENSCLAG00000005392PRDM510097.333Chinchilla_lanigera
ENSPCAG00000011671PRDM510085.810ENSCSAG00000003729PRDM59585.810Chlorocebus_sabaeus
ENSPCAG00000011671PRDM510092.273ENSCHOG00000007801PRDM58692.273Choloepus_hoffmanni
ENSPCAG00000011671PRDM510077.961ENSCPBG00000024735PRDM59577.961Chrysemys_picta_bellii
ENSPCAG00000011671PRDM59698.000ENSCANG00000036807PRDM58898.000Colobus_angolensis_palliatus
ENSPCAG00000011671PRDM59694.667ENSCGRG00001010581Prdm58894.667Cricetulus_griseus_chok1gshd
ENSPCAG00000011671PRDM510073.754ENSCGRG00000010996-9973.058Cricetulus_griseus_crigri
ENSPCAG00000011671PRDM510071.167ENSCSEG00000019979prdm59571.667Cynoglossus_semilaevis
ENSPCAG00000011671PRDM510068.174ENSCVAG00000013692prdm59568.336Cyprinodon_variegatus
ENSPCAG00000011671PRDM510072.546ENSDARG00000006288prdm59572.546Danio_rerio
ENSPCAG00000011671PRDM59690.435ENSDNOG00000002009PRDM510090.435Dasypus_novemcinctus
ENSPCAG00000011671PRDM510088.608ENSDORG00000007739Prdm59388.608Dipodomys_ordii
ENSPCAG00000011671PRDM510068.421ENSETEG00000020268PRDM510068.421Echinops_telfairi
ENSPCAG00000011671PRDM59963.712ENSEBUG00000004301prdm59564.381Eptatretus_burgeri
ENSPCAG00000011671PRDM59698.667ENSEASG00005018365PRDM58898.667Equus_asinus_asinus
ENSPCAG00000011671PRDM59989.474ENSECAG00000011516PRDM58589.474Equus_caballus
ENSPCAG00000011671PRDM510064.198ENSECAG00000024747-9277.259Equus_caballus
ENSPCAG00000011671PRDM59980.000ENSEEUG00000010306PRDM59580.000Erinaceus_europaeus
ENSPCAG00000011671PRDM59970.312ENSELUG00000005894prdm58770.508Esox_lucius
ENSPCAG00000011671PRDM510090.818ENSFCAG00000025656PRDM59590.818Felis_catus
ENSPCAG00000011671PRDM59475.862ENSFALG00000008381PRDM59075.862Ficedula_albicollis
ENSPCAG00000011671PRDM59697.333ENSFDAG00000021361PRDM58897.333Fukomys_damarensis
ENSPCAG00000011671PRDM510071.667ENSFHEG00000013040prdm59571.833Fundulus_heteroclitus
ENSPCAG00000011671PRDM510068.553ENSGMOG00000012038prdm58869.737Gadus_morhua
ENSPCAG00000011671PRDM510078.904ENSGALG00000011963PRDM59578.904Gallus_gallus
ENSPCAG00000011671PRDM59871.624ENSGAFG00000019233prdm59567.667Gambusia_affinis
ENSPCAG00000011671PRDM59874.949ENSGAGG00000020362PRDM59375.356Gopherus_agassizii
ENSPCAG00000011671PRDM59698.000ENSGGOG00000013562PRDM58898.000Gorilla_gorilla
ENSPCAG00000011671PRDM510071.333ENSHBUG00000023375prdm59571.667Haplochromis_burtoni
ENSPCAG00000011671PRDM59583.740ENSHGLG00000003010PRDM59579.299Heterocephalus_glaber_female
ENSPCAG00000011671PRDM59697.333ENSHGLG00100003696PRDM58897.333Heterocephalus_glaber_male
ENSPCAG00000011671PRDM510073.378ENSHCOG00000012131prdm59574.043Hippocampus_comes
ENSPCAG00000011671PRDM510073.877ENSIPUG00000001248prdm59574.210Ictalurus_punctatus
ENSPCAG00000011671PRDM59593.333ENSSTOG00000004741PRDM510093.333Ictidomys_tridecemlineatus
ENSPCAG00000011671PRDM59596.667ENSJJAG00000011464Prdm510096.667Jaculus_jaculus
ENSPCAG00000011671PRDM510071.667ENSKMAG00000013663prdm59571.833Kryptolebias_marmoratus
ENSPCAG00000011671PRDM510073.167ENSLBEG00000022736prdm59573.500Labrus_bergylta
ENSPCAG00000011671PRDM59677.470ENSLACG00000009187PRDM59977.816Latimeria_chalumnae
ENSPCAG00000011671PRDM510075.333ENSLOCG00000009778prdm59575.333Lepisosteus_oculatus
ENSPCAG00000011671PRDM510087.145ENSLAFG00000006532PRDM59989.557Loxodonta_africana
ENSPCAG00000011671PRDM59698.000ENSMFAG00000045845PRDM58898.000Macaca_fascicularis
ENSPCAG00000011671PRDM59698.000ENSMMUG00000003249PRDM58898.000Macaca_mulatta
ENSPCAG00000011671PRDM59698.000ENSMNEG00000019018PRDM58898.000Macaca_nemestrina
ENSPCAG00000011671PRDM510090.651ENSMLEG00000023145PRDM510090.651Mandrillus_leucophaeus
ENSPCAG00000011671PRDM510072.879ENSMAMG00000013419prdm59573.333Mastacembelus_armatus
ENSPCAG00000011671PRDM510071.333ENSMZEG00005020645prdm59571.667Maylandia_zebra
ENSPCAG00000011671PRDM510078.738ENSMGAG00000010710PRDM510078.738Meleagris_gallopavo
ENSPCAG00000011671PRDM59694.667ENSMAUG00000006768Prdm58894.667Mesocricetus_auratus
ENSPCAG00000011671PRDM59697.333ENSMICG00000001459PRDM58897.333Microcebus_murinus
ENSPCAG00000011671PRDM59694.667ENSMOCG00000016267Prdm58894.667Microtus_ochrogaster
ENSPCAG00000011671PRDM510071.500ENSMMOG00000006035prdm59571.500Mola_mola
ENSPCAG00000011671PRDM510074.419ENSMODG00000018942PRDM59574.419Monodelphis_domestica
ENSPCAG00000011671PRDM510071.333ENSMALG00000013934prdm59571.714Monopterus_albus
ENSPCAG00000011671PRDM59695.333MGP_CAROLIEiJ_G0028463Prdm58895.333Mus_caroli
ENSPCAG00000011671PRDM59695.333ENSMUSG00000029913Prdm58895.333Mus_musculus
ENSPCAG00000011671PRDM59695.333MGP_PahariEiJ_G0022203Prdm58895.333Mus_pahari
ENSPCAG00000011671PRDM59695.333MGP_SPRETEiJ_G0029467Prdm58895.333Mus_spretus
ENSPCAG00000011671PRDM510090.150ENSMPUG00000017415PRDM59590.150Mustela_putorius_furo
ENSPCAG00000011671PRDM59679.239ENSMLUG00000006097PRDM510079.239Myotis_lucifugus
ENSPCAG00000011671PRDM59695.333ENSNGAG00000018317Prdm58895.333Nannospalax_galili
ENSPCAG00000011671PRDM510062.890ENSNBRG00000004976prdm59567.940Neolamprologus_brichardi
ENSPCAG00000011671PRDM59698.000ENSNLEG00000009107PRDM58898.000Nomascus_leucogenys
ENSPCAG00000011671PRDM58389.286ENSMEUG00000006576-6689.286Notamacropus_eugenii
ENSPCAG00000011671PRDM510068.399ENSOPRG00000011066-8968.399Ochotona_princeps
ENSPCAG00000011671PRDM59697.333ENSODEG00000009133PRDM58997.333Octodon_degus
ENSPCAG00000011671PRDM510073.500ENSONIG00000003111prdm59573.667Oreochromis_niloticus
ENSPCAG00000011671PRDM55988.889ENSOANG00000006197-10088.889Ornithorhynchus_anatinus
ENSPCAG00000011671PRDM59968.966ENSOANG00000015109PRDM59168.966Ornithorhynchus_anatinus
ENSPCAG00000011671PRDM59881.601ENSOCUG00000013454PRDM510083.135Oryctolagus_cuniculus
ENSPCAG00000011671PRDM510071.333ENSORLG00000016247prdm59571.833Oryzias_latipes
ENSPCAG00000011671PRDM510071.500ENSORLG00020018051prdm59571.667Oryzias_latipes_hni
ENSPCAG00000011671PRDM510071.333ENSORLG00015013760prdm59571.833Oryzias_latipes_hsok
ENSPCAG00000011671PRDM510071.714ENSOMEG00000005143prdm59572.047Oryzias_melastigma
ENSPCAG00000011671PRDM58981.921ENSOGAG00000009996PRDM59881.495Otolemur_garnettii
ENSPCAG00000011671PRDM59986.885ENSOARG00000015473PRDM510086.871Ovis_aries
ENSPCAG00000011671PRDM510090.484ENSPPAG00000043045PRDM510090.460Pan_paniscus
ENSPCAG00000011671PRDM510090.818ENSPPRG00000001020PRDM59590.818Panthera_pardus
ENSPCAG00000011671PRDM510090.651ENSPTIG00000010807PRDM59590.651Panthera_tigris_altaica
ENSPCAG00000011671PRDM59698.000ENSPTRG00000016403PRDM58898.000Pan_troglodytes
ENSPCAG00000011671PRDM59698.000ENSPANG00000023612PRDM58898.000Papio_anubis
ENSPCAG00000011671PRDM510045.487ENSPKIG00000015492prdm59451.741Paramormyrops_kingsleyae
ENSPCAG00000011671PRDM510078.239ENSPSIG00000013505PRDM59578.239Pelodiscus_sinensis
ENSPCAG00000011671PRDM510069.833ENSPMGG00000012622prdm59570.333Periophthalmus_magnuspinnatus
ENSPCAG00000011671PRDM57765.291ENSPMAG00000005248prdm510065.291Petromyzon_marinus
ENSPCAG00000011671PRDM59567.405ENSPFOG00000018630prdm58868.354Poecilia_formosa
ENSPCAG00000011671PRDM510074.086ENSPLAG00000014148prdm59574.252Poecilia_latipinna
ENSPCAG00000011671PRDM510072.167ENSPMEG00000018002prdm59572.333Poecilia_mexicana
ENSPCAG00000011671PRDM510072.167ENSPREG00000018366prdm59572.333Poecilia_reticulata
ENSPCAG00000011671PRDM510090.484ENSPPYG00000015031PRDM59590.484Pongo_abelii
ENSPCAG00000011671PRDM59697.333ENSPCOG00000022828PRDM58897.333Propithecus_coquereli
ENSPCAG00000011671PRDM510081.803ENSPVAG00000012309PRDM510081.803Pteropus_vampyrus
ENSPCAG00000011671PRDM510071.833ENSPNYG00000012194prdm59571.833Pundamilia_nyererei
ENSPCAG00000011671PRDM59870.798ENSPNAG00000023191-10070.798Pygocentrus_nattereri
ENSPCAG00000011671PRDM510071.333ENSPNAG00000026181prdm59571.333Pygocentrus_nattereri
ENSPCAG00000011671PRDM59977.379ENSRNOG00000023679Prdm59477.379Rattus_norvegicus
ENSPCAG00000011671PRDM59698.000ENSRBIG00000041307PRDM58898.000Rhinopithecus_bieti
ENSPCAG00000011671PRDM59971.024ENSRROG00000035343PRDM510080.301Rhinopithecus_roxellana
ENSPCAG00000011671PRDM59698.000ENSSBOG00000022100PRDM58898.000Saimiri_boliviensis_boliviensis
ENSPCAG00000011671PRDM59672.951ENSSHAG00000003250PRDM510073.156Sarcophilus_harrisii
ENSPCAG00000011671PRDM510068.667ENSSFOG00015020478prdm59569.167Scleropages_formosus
ENSPCAG00000011671PRDM510073.333ENSSMAG00000018844prdm59573.333Scophthalmus_maximus
ENSPCAG00000011671PRDM510071.667ENSSDUG00000020397prdm59572.000Seriola_dumerili
ENSPCAG00000011671PRDM59972.943ENSSLDG00000013353prdm59572.000Seriola_lalandi_dorsalis
ENSPCAG00000011671PRDM510098.291ENSSARG00000014129-8098.291Sorex_araneus
ENSPCAG00000011671PRDM59690.000ENSSPUG00000009941PRDM58890.000Sphenodon_punctatus
ENSPCAG00000011671PRDM510073.500ENSSPAG00000013866prdm59573.667Stegastes_partitus
ENSPCAG00000011671PRDM510090.651ENSSSCG00000009101PRDM59590.651Sus_scrofa
ENSPCAG00000011671PRDM510078.297ENSTGUG00000001920PRDM510078.297Taeniopygia_guttata
ENSPCAG00000011671PRDM510071.000ENSTRUG00000013850prdm59571.000Takifugu_rubripes
ENSPCAG00000011671PRDM510062.292ENSTNIG00000005901prdm59562.292Tetraodon_nigroviridis
ENSPCAG00000011671PRDM59689.086ENSTBEG00000015386PRDM58689.086Tupaia_belangeri
ENSPCAG00000011671PRDM510090.150ENSTTRG00000010996PRDM59590.150Tursiops_truncatus
ENSPCAG00000011671PRDM59985.470ENSUAMG00000009994PRDM58482.398Ursus_americanus
ENSPCAG00000011671PRDM510090.506ENSUMAG00000003733PRDM59990.506Ursus_maritimus
ENSPCAG00000011671PRDM510078.947ENSVPAG00000007435PRDM59878.947Vicugna_pacos
ENSPCAG00000011671PRDM59890.971ENSVVUG00000013192PRDM510090.971Vulpes_vulpes
ENSPCAG00000011671PRDM510074.167ENSXETG00000002101prdm59574.167Xenopus_tropicalis
ENSPCAG00000011671PRDM510071.500ENSXCOG00000008567prdm59572.000Xiphophorus_couchianus
ENSPCAG00000011671PRDM510071.500ENSXMAG00000013825prdm59572.000Xiphophorus_maculatus

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