EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000011787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 22888 bases
Position: chrGeneScaffold_5554:33449-56336
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000010984	RRM_1	PF00076.22	1.8e-41	1	3
ENSPCAP00000010984	RRM_1	PF00076.22	1.8e-41	2	3
ENSPCAP00000010984	RRM_1	PF00076.22	1.8e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011761	-	1239	-	ENSPCAP00000010984	413 (aa)	-	UPI00018AE728

Gene Model

Click here to download ENSPCAG00000011787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000011787	-	61	60.000	ENSPCAG00000015577	PABPC5	85	59.649
ENSPCAG00000011787	-	75	81.250	ENSPCAG00000003341	PABPC4	53	81.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011787	-	75	93.750	ENSG00000101104	PABPC1L	82	93.750	Homo_sapiens
ENSPCAG00000011787	-	75	84.375	ENSAPOG00000010842	pabpc1l	61	84.375	Acanthochromis_polyacanthus
ENSPCAG00000011787	-	75	95.312	ENSAMEG00000004099	PABPC1L	61	95.312	Ailuropoda_melanoleuca
ENSPCAG00000011787	-	75	84.375	ENSACIG00000021004	-	70	82.051	Amphilophus_citrinellus
ENSPCAG00000011787	-	75	85.938	ENSAOCG00000006167	-	60	85.938	Amphiprion_ocellaris
ENSPCAG00000011787	-	75	85.938	ENSAPEG00000010558	-	92	85.938	Amphiprion_percula
ENSPCAG00000011787	-	75	85.938	ENSATEG00000007428	pabpc1l	61	85.938	Anabas_testudineus
ENSPCAG00000011787	-	73	83.636	ENSAPLG00000008415	PABPC1L	60	81.967	Anas_platyrhynchos
ENSPCAG00000011787	-	75	93.750	ENSACAG00000011841	PABPC1L	60	93.750	Anolis_carolinensis
ENSPCAG00000011787	-	75	92.188	ENSANAG00000026826	PABPC1L	62	92.188	Aotus_nancymaae
ENSPCAG00000011787	-	75	84.375	ENSACLG00000024791	pabpc1l	60	84.375	Astatotilapia_calliptera
ENSPCAG00000011787	-	75	85.938	ENSAMXG00000013552	pabpc1l	60	85.938	Astyanax_mexicanus
ENSPCAG00000011787	-	59	58.776	ENSBTAG00000016849	PABPC1L	74	58.776	Bos_taurus
ENSPCAG00000011787	-	75	92.188	ENSCJAG00000017628	PABPC1L	62	92.188	Callithrix_jacchus
ENSPCAG00000011787	-	75	93.750	ENSCAFG00000009573	PABPC1L	61	93.750	Canis_familiaris
ENSPCAG00000011787	-	75	93.750	ENSCAFG00020013828	PABPC1L	62	93.750	Canis_lupus_dingo
ENSPCAG00000011787	-	75	95.312	ENSCHIG00000025759	PABPC1L	60	95.312	Capra_hircus
ENSPCAG00000011787	-	75	89.062	ENSTSYG00000006645	PABPC1L	62	89.062	Carlito_syrichta
ENSPCAG00000011787	-	59	57.551	ENSCAPG00000014519	PABPC1L	58	57.551	Cavia_aperea
ENSPCAG00000011787	-	74	85.938	ENSCPOG00000013633	PABPC1L	61	85.938	Cavia_porcellus
ENSPCAG00000011787	-	74	92.188	ENSCCAG00000023338	PABPC1L	62	92.188	Cebus_capucinus
ENSPCAG00000011787	-	75	93.750	ENSCATG00000034065	PABPC1L	62	93.750	Cercocebus_atys
ENSPCAG00000011787	-	74	82.812	ENSCLAG00000005298	PABPC1L	61	82.812	Chinchilla_lanigera
ENSPCAG00000011787	-	75	93.750	ENSCSAG00000014242	PABPC1L	62	93.750	Chlorocebus_sabaeus
ENSPCAG00000011787	-	75	93.750	ENSCPBG00000017755	-	85	93.750	Chrysemys_picta_bellii
ENSPCAG00000011787	-	58	39.844	ENSCING00000002796	-	51	39.844	Ciona_intestinalis
ENSPCAG00000011787	-	71	86.275	ENSCSAVG00000004246	-	64	86.275	Ciona_savignyi
ENSPCAG00000011787	-	72	83.636	ENSCSAVG00000003102	-	73	83.636	Ciona_savignyi
ENSPCAG00000011787	-	75	93.750	ENSCANG00000037530	PABPC1L	62	93.750	Colobus_angolensis_palliatus
ENSPCAG00000011787	-	75	78.125	ENSCGRG00001021938	Pabpc1l	63	78.125	Cricetulus_griseus_chok1gshd
ENSPCAG00000011787	-	75	78.125	ENSCGRG00000007946	Pabpc1l	63	78.125	Cricetulus_griseus_crigri
ENSPCAG00000011787	-	74	85.246	ENSCSEG00000021295	pabpc1l	67	85.246	Cynoglossus_semilaevis
ENSPCAG00000011787	-	75	85.938	ENSCVAG00000015943	-	68	85.938	Cyprinodon_variegatus
ENSPCAG00000011787	-	75	85.938	ENSDARG00000002597	pabpc1l	68	85.938	Danio_rerio
ENSPCAG00000011787	-	75	93.750	ENSDNOG00000048450	PABPC1L	62	93.750	Dasypus_novemcinctus
ENSPCAG00000011787	-	75	87.500	ENSDORG00000001067	Pabpc1l	62	87.500	Dipodomys_ordii
ENSPCAG00000011787	-	59	62.626	ENSECAG00000040139	-	71	62.626	Equus_caballus
ENSPCAG00000011787	-	74	89.062	ENSEEUG00000005978	PABPC1L	61	89.062	Erinaceus_europaeus
ENSPCAG00000011787	-	75	85.938	ENSELUG00000001811	pabpc1l	74	85.938	Esox_lucius
ENSPCAG00000011787	-	75	95.312	ENSFCAG00000011692	PABPC1L	62	95.312	Felis_catus
ENSPCAG00000011787	-	75	92.188	ENSFALG00000005372	PABPC1L	64	92.188	Ficedula_albicollis
ENSPCAG00000011787	-	75	85.938	ENSFDAG00000008291	PABPC1L	64	85.938	Fukomys_damarensis
ENSPCAG00000011787	-	75	85.938	ENSFHEG00000003398	pabpc1l	62	85.938	Fundulus_heteroclitus
ENSPCAG00000011787	-	75	85.938	ENSGMOG00000004437	pabpc1l	61	85.938	Gadus_morhua
ENSPCAG00000011787	-	75	93.750	ENSGALG00000004123	PABPC1L	90	93.750	Gallus_gallus
ENSPCAG00000011787	-	75	85.938	ENSGAFG00000021057	pabpc1l	55	85.938	Gambusia_affinis
ENSPCAG00000011787	-	75	85.938	ENSGACG00000002792	pabpc1l	61	85.938	Gasterosteus_aculeatus
ENSPCAG00000011787	-	75	93.750	ENSGAGG00000000589	PABPC1L	68	93.750	Gopherus_agassizii
ENSPCAG00000011787	-	75	93.750	ENSGGOG00000004584	PABPC1L	62	93.750	Gorilla_gorilla
ENSPCAG00000011787	-	75	84.375	ENSHBUG00000006134	pabpc1l	67	84.375	Haplochromis_burtoni
ENSPCAG00000011787	-	75	85.938	ENSHGLG00000008434	PABPC1L	62	85.938	Heterocephalus_glaber_female
ENSPCAG00000011787	-	60	82.812	ENSHGLG00100019506	-	100	82.812	Heterocephalus_glaber_male
ENSPCAG00000011787	-	75	85.938	ENSHGLG00100012151	PABPC1L	62	85.938	Heterocephalus_glaber_male
ENSPCAG00000011787	-	75	85.938	ENSHCOG00000009270	pabpc1l	66	85.938	Hippocampus_comes
ENSPCAG00000011787	-	75	84.375	ENSIPUG00000012602	pabpc1l	65	84.375	Ictalurus_punctatus
ENSPCAG00000011787	-	61	61.111	ENSIPUG00000006780	-	83	61.111	Ictalurus_punctatus
ENSPCAG00000011787	-	75	89.062	ENSSTOG00000003739	PABPC1L	62	89.062	Ictidomys_tridecemlineatus
ENSPCAG00000011787	-	74	79.032	ENSJJAG00000022406	Pabpc1l	62	79.032	Jaculus_jaculus
ENSPCAG00000011787	-	75	85.938	ENSKMAG00000016847	pabpc1l	69	85.938	Kryptolebias_marmoratus
ENSPCAG00000011787	-	75	82.812	ENSLBEG00000010084	pabpc1l	63	82.812	Labrus_bergylta
ENSPCAG00000011787	-	75	89.062	ENSLACG00000005762	PABPC1L	69	89.062	Latimeria_chalumnae
ENSPCAG00000011787	-	75	85.938	ENSLOCG00000007519	pabpc1l	60	85.938	Lepisosteus_oculatus
ENSPCAG00000011787	-	75	100.000	ENSLAFG00000003553	PABPC1L	61	100.000	Loxodonta_africana
ENSPCAG00000011787	-	75	93.750	ENSMFAG00000040365	PABPC1L	62	93.750	Macaca_fascicularis
ENSPCAG00000011787	-	75	93.750	ENSMNEG00000032298	PABPC1L	61	93.750	Macaca_nemestrina
ENSPCAG00000011787	-	75	93.750	ENSMLEG00000043139	PABPC1L	62	93.750	Mandrillus_leucophaeus
ENSPCAG00000011787	-	75	82.812	ENSMAMG00000011854	pabpc1l	61	82.812	Mastacembelus_armatus
ENSPCAG00000011787	-	75	84.375	ENSMZEG00005023713	pabpc1l	60	84.375	Maylandia_zebra
ENSPCAG00000011787	-	75	93.750	ENSMGAG00000003674	PABPC1L	60	93.750	Meleagris_gallopavo
ENSPCAG00000011787	-	75	81.250	ENSMOCG00000013186	Pabpc1l	63	81.250	Microtus_ochrogaster
ENSPCAG00000011787	-	75	85.938	ENSMMOG00000020574	-	68	85.938	Mola_mola
ENSPCAG00000011787	-	75	92.188	ENSMODG00000016198	PABPC1L	66	92.188	Monodelphis_domestica
ENSPCAG00000011787	-	75	84.375	ENSMALG00000021622	pabpc1l	62	84.375	Monopterus_albus
ENSPCAG00000011787	-	75	78.125	MGP_CAROLIEiJ_G0024627	Pabpc1l	63	78.125	Mus_caroli
ENSPCAG00000011787	-	75	78.125	ENSMUSG00000054582	Pabpc1l	63	78.125	Mus_musculus
ENSPCAG00000011787	-	75	76.562	MGP_PahariEiJ_G0026071	Pabpc1l	63	76.562	Mus_pahari
ENSPCAG00000011787	-	75	78.125	MGP_SPRETEiJ_G0025549	Pabpc1l	63	78.125	Mus_spretus
ENSPCAG00000011787	-	75	95.312	ENSMPUG00000017646	PABPC1L	61	95.312	Mustela_putorius_furo
ENSPCAG00000011787	-	75	90.625	ENSMLUG00000006324	PABPC1L	62	90.625	Myotis_lucifugus
ENSPCAG00000011787	-	75	82.812	ENSNGAG00000010458	Pabpc1l	63	82.812	Nannospalax_galili
ENSPCAG00000011787	-	75	84.375	ENSNBRG00000016633	pabpc1l	70	82.051	Neolamprologus_brichardi
ENSPCAG00000011787	-	75	89.062	ENSMEUG00000007905	-	62	89.062	Notamacropus_eugenii
ENSPCAG00000011787	-	75	90.625	ENSOPRG00000011846	PABPC1L	61	90.625	Ochotona_princeps
ENSPCAG00000011787	-	75	85.938	ENSODEG00000015482	PABPC1L	70	85.938	Octodon_degus
ENSPCAG00000011787	-	75	84.375	ENSONIG00000017314	pabpc1l	60	84.375	Oreochromis_niloticus
ENSPCAG00000011787	-	75	87.500	ENSOANG00000015793	-	59	87.500	Ornithorhynchus_anatinus
ENSPCAG00000011787	-	75	89.062	ENSOCUG00000003005	PABPC1L	59	89.062	Oryctolagus_cuniculus
ENSPCAG00000011787	-	75	85.938	ENSORLG00000010322	pabpc1l	73	84.615	Oryzias_latipes
ENSPCAG00000011787	-	75	85.938	ENSORLG00020021193	pabpc1l	73	84.615	Oryzias_latipes_hni
ENSPCAG00000011787	-	75	85.938	ENSORLG00015017018	pabpc1l	73	84.615	Oryzias_latipes_hsok
ENSPCAG00000011787	-	75	87.500	ENSOMEG00000010789	pabpc1l	57	87.500	Oryzias_melastigma
ENSPCAG00000011787	-	75	90.625	ENSOGAG00000032999	PABPC1L	61	90.625	Otolemur_garnettii
ENSPCAG00000011787	-	75	93.750	ENSOARG00000004578	PABPC1L	62	93.750	Ovis_aries
ENSPCAG00000011787	-	75	93.750	ENSPPAG00000039677	PABPC1L	62	93.750	Pan_paniscus
ENSPCAG00000011787	-	68	95.312	ENSPPRG00000019327	-	91	95.312	Panthera_pardus
ENSPCAG00000011787	-	73	94.828	ENSPTIG00000006524	PABPC1L	62	94.828	Panthera_tigris_altaica
ENSPCAG00000011787	-	68	93.750	ENSPTRG00000013531	PABPC1L	82	93.750	Pan_troglodytes
ENSPCAG00000011787	-	75	93.750	ENSPANG00000018788	PABPC1L	62	93.750	Papio_anubis
ENSPCAG00000011787	-	75	81.250	ENSPKIG00000007322	pabpc1l	62	81.250	Paramormyrops_kingsleyae
ENSPCAG00000011787	-	75	93.750	ENSPSIG00000013289	PABPC1L	90	93.750	Pelodiscus_sinensis
ENSPCAG00000011787	-	65	85.938	ENSPMGG00000023117	pabpc1l	96	85.938	Periophthalmus_magnuspinnatus
ENSPCAG00000011787	-	75	78.125	ENSPEMG00000020671	Pabpc1l	63	78.125	Peromyscus_maniculatus_bairdii
ENSPCAG00000011787	-	75	85.938	ENSPFOG00000013241	pabpc1l	61	85.938	Poecilia_formosa
ENSPCAG00000011787	-	75	85.938	ENSPLAG00000017490	-	67	85.938	Poecilia_latipinna
ENSPCAG00000011787	-	75	85.938	ENSPMEG00000007677	pabpc1l	61	85.938	Poecilia_mexicana
ENSPCAG00000011787	-	75	85.938	ENSPREG00000015886	pabpc1l	91	85.938	Poecilia_reticulata
ENSPCAG00000011787	-	75	93.750	ENSPPYG00000011042	PABPC1L	62	93.750	Pongo_abelii
ENSPCAG00000011787	-	75	90.625	ENSPCOG00000020630	PABPC1L	62	90.625	Propithecus_coquereli
ENSPCAG00000011787	-	75	90.625	ENSPVAG00000012663	PABPC1L	62	90.625	Pteropus_vampyrus
ENSPCAG00000011787	-	75	84.375	ENSPNYG00000004101	pabpc1l	70	82.051	Pundamilia_nyererei
ENSPCAG00000011787	-	75	85.938	ENSPNAG00000021248	pabpc1l	58	85.938	Pygocentrus_nattereri
ENSPCAG00000011787	-	75	79.688	ENSRNOG00000012750	Pabpc1l	63	79.688	Rattus_norvegicus
ENSPCAG00000011787	-	75	93.750	ENSRBIG00000035381	PABPC1L	62	93.750	Rhinopithecus_bieti
ENSPCAG00000011787	-	75	93.750	ENSRROG00000044498	PABPC1L	62	93.750	Rhinopithecus_roxellana
ENSPCAG00000011787	-	75	92.188	ENSSBOG00000009532	-	62	92.188	Saimiri_boliviensis_boliviensis
ENSPCAG00000011787	-	59	58.776	ENSSHAG00000011446	PABPC1L	50	58.776	Sarcophilus_harrisii
ENSPCAG00000011787	-	75	87.500	ENSSFOG00015017304	pabpc1l	60	87.500	Scleropages_formosus
ENSPCAG00000011787	-	75	85.938	ENSSMAG00000010516	pabpc1l	99	85.938	Scophthalmus_maximus
ENSPCAG00000011787	-	75	85.938	ENSSDUG00000014743	pabpc1l	61	85.938	Seriola_dumerili
ENSPCAG00000011787	-	75	85.938	ENSSLDG00000006981	pabpc1l	98	85.938	Seriola_lalandi_dorsalis
ENSPCAG00000011787	-	75	90.625	ENSSPUG00000004233	PABPC1L	60	90.625	Sphenodon_punctatus
ENSPCAG00000011787	-	75	85.938	ENSSPAG00000017137	pabpc1l	68	85.938	Stegastes_partitus
ENSPCAG00000011787	-	75	95.312	ENSSSCG00000007382	PABPC1L	62	95.312	Sus_scrofa
ENSPCAG00000011787	-	75	93.750	ENSTGUG00000005114	PABPC1L	62	93.750	Taeniopygia_guttata
ENSPCAG00000011787	-	75	85.938	ENSTRUG00000011085	pabpc1l	67	85.938	Takifugu_rubripes
ENSPCAG00000011787	-	75	85.938	ENSTNIG00000017903	pabpc1l	65	85.938	Tetraodon_nigroviridis
ENSPCAG00000011787	-	75	92.188	ENSTTRG00000007618	PABPC1L	64	92.188	Tursiops_truncatus
ENSPCAG00000011787	-	75	95.312	ENSUAMG00000017682	PABPC1L	65	95.312	Ursus_americanus
ENSPCAG00000011787	-	59	65.306	ENSUMAG00000025436	PABPC1L	80	65.306	Ursus_maritimus
ENSPCAG00000011787	-	75	95.312	ENSVVUG00000018939	PABPC1L	63	95.312	Vulpes_vulpes
ENSPCAG00000011787	-	75	89.062	ENSXETG00000022831	pabpc1l	66	89.062	Xenopus_tropicalis
ENSPCAG00000011787	-	75	85.938	ENSXCOG00000005459	pabpc1l	68	84.615	Xiphophorus_couchianus
ENSPCAG00000011787	-	75	85.938	ENSXMAG00000017135	pabpc1l	67	85.938	Xiphophorus_maculatus