EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000011879 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 15040 bases
Position: chrGeneScaffold_5188:13688-28727
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011062	RRM_1	PF00076.22	3.1e-38	1	3
ENSPCAP00000011062	RRM_1	PF00076.22	3.1e-38	2	3
ENSPCAP00000011062	RRM_1	PF00076.22	3.1e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011842	RBM47-201	1779	-	ENSPCAP00000011062	592 (aa)	-	UPI00018AF8EF

Gene Model

Click here to download ENSPCAG00000011879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000011879	RBM47	52	46.326	ENSPCAG00000010462	HNRNPR	70	40.000
ENSPCAG00000011879	RBM47	51	67.000	ENSPCAG00000003110	RBM46	56	68.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011879	RBM47	81	97.500	ENSG00000163694	RBM47	100	98.157	Homo_sapiens
ENSPCAG00000011879	RBM47	81	83.709	ENSAPOG00000011062	rbm47	89	78.141	Acanthochromis_polyacanthus
ENSPCAG00000011879	RBM47	81	96.750	ENSAMEG00000009672	RBM47	80	96.750	Ailuropoda_melanoleuca
ENSPCAG00000011879	RBM47	81	84.461	ENSACIG00000011531	rbm47	81	81.955	Amphilophus_citrinellus
ENSPCAG00000011879	RBM47	81	83.960	ENSAOCG00000022245	rbm47	89	78.141	Amphiprion_ocellaris
ENSPCAG00000011879	RBM47	81	83.960	ENSAPEG00000018304	rbm47	89	78.141	Amphiprion_percula
ENSPCAG00000011879	RBM47	81	82.367	ENSATEG00000018400	rbm47	82	79.710	Anabas_testudineus
ENSPCAG00000011879	RBM47	81	92.040	ENSAPLG00000013974	RBM47	81	91.542	Anas_platyrhynchos
ENSPCAG00000011879	RBM47	81	86.318	ENSACAG00000011833	RBM47	81	86.318	Anolis_carolinensis
ENSPCAG00000011879	RBM47	81	97.000	ENSANAG00000029440	RBM47	96	96.579	Aotus_nancymaae
ENSPCAG00000011879	RBM47	81	81.796	ENSACLG00000016902	rbm47	88	78.680	Astatotilapia_calliptera
ENSPCAG00000011879	RBM47	81	80.145	ENSAMXG00000021794	rbm47	82	79.177	Astyanax_mexicanus
ENSPCAG00000011879	RBM47	81	97.007	ENSBTAG00000002356	RBM47	81	97.007	Bos_taurus
ENSPCAG00000011879	RBM47	81	97.000	ENSCJAG00000019385	RBM47	96	96.579	Callithrix_jacchus
ENSPCAG00000011879	RBM47	77	95.767	ENSCAFG00000015898	RBM47	81	93.781	Canis_familiaris
ENSPCAG00000011879	RBM47	64	95.767	ENSCAFG00020010558	RBM47	82	92.969	Canis_lupus_dingo
ENSPCAG00000011879	RBM47	81	97.257	ENSCHIG00000026214	RBM47	81	97.257	Capra_hircus
ENSPCAG00000011879	RBM47	67	85.000	ENSTSYG00000033612	RBM47	69	86.250	Carlito_syrichta
ENSPCAG00000011879	RBM47	81	86.500	ENSCAPG00000008426	RBM47	88	88.889	Cavia_aperea
ENSPCAG00000011879	RBM47	81	96.250	ENSCPOG00000014100	RBM47	88	95.288	Cavia_porcellus
ENSPCAG00000011879	RBM47	80	65.347	ENSCCAG00000024397	-	81	63.861	Cebus_capucinus
ENSPCAG00000011879	RBM47	81	97.000	ENSCCAG00000030129	-	96	96.579	Cebus_capucinus
ENSPCAG00000011879	RBM47	81	97.500	ENSCATG00000042064	RBM47	96	97.354	Cercocebus_atys
ENSPCAG00000011879	RBM47	81	95.750	ENSCLAG00000001684	RBM47	100	94.304	Chinchilla_lanigera
ENSPCAG00000011879	RBM47	81	97.500	ENSCSAG00000017060	RBM47	81	97.500	Chlorocebus_sabaeus
ENSPCAG00000011879	RBM47	81	88.000	ENSCHOG00000011731	RBM47	81	89.000	Choloepus_hoffmanni
ENSPCAG00000011879	RBM47	81	92.519	ENSCPBG00000013831	RBM47	81	92.269	Chrysemys_picta_bellii
ENSPCAG00000011879	RBM47	81	97.500	ENSCANG00000019997	RBM47	96	97.354	Colobus_angolensis_palliatus
ENSPCAG00000011879	RBM47	81	94.514	ENSCGRG00001000623	-	88	93.734	Cricetulus_griseus_chok1gshd
ENSPCAG00000011879	RBM47	77	89.974	ENSCGRG00001020102	-	87	89.710	Cricetulus_griseus_chok1gshd
ENSPCAG00000011879	RBM47	81	93.250	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSPCAG00000011879	RBM47	77	89.446	ENSCGRG00000014760	-	87	89.182	Cricetulus_griseus_crigri
ENSPCAG00000011879	RBM47	81	81.796	ENSCSEG00000004545	rbm47	81	79.551	Cynoglossus_semilaevis
ENSPCAG00000011879	RBM47	81	83.208	ENSCVAG00000020144	rbm47	89	78.392	Cyprinodon_variegatus
ENSPCAG00000011879	RBM47	81	79.854	ENSDARG00000061985	rbm47	82	79.369	Danio_rerio
ENSPCAG00000011879	RBM47	81	97.756	ENSDNOG00000046854	RBM47	82	97.756	Dasypus_novemcinctus
ENSPCAG00000011879	RBM47	81	94.307	ENSDORG00000010144	Rbm47	81	93.564	Dipodomys_ordii
ENSPCAG00000011879	RBM47	81	95.522	ENSETEG00000009194	RBM47	81	95.522	Echinops_telfairi
ENSPCAG00000011879	RBM47	63	71.467	ENSEBUG00000011912	rbm47	73	70.426	Eptatretus_burgeri
ENSPCAG00000011879	RBM47	81	97.257	ENSEASG00005008443	RBM47	81	97.257	Equus_asinus_asinus
ENSPCAG00000011879	RBM47	81	97.257	ENSECAG00000004400	RBM47	81	97.257	Equus_caballus
ENSPCAG00000011879	RBM47	52	95.671	ENSEEUG00000001194	RBM47	52	95.671	Erinaceus_europaeus
ENSPCAG00000011879	RBM47	80	83.333	ENSELUG00000006148	rbm47	86	80.469	Esox_lucius
ENSPCAG00000011879	RBM47	81	97.000	ENSFCAG00000012399	RBM47	81	97.000	Felis_catus
ENSPCAG00000011879	RBM47	81	91.771	ENSFALG00000002861	RBM47	81	91.272	Ficedula_albicollis
ENSPCAG00000011879	RBM47	81	94.250	ENSFDAG00000016326	RBM47	89	93.194	Fukomys_damarensis
ENSPCAG00000011879	RBM47	81	83.960	ENSFHEG00000007938	rbm47	82	81.203	Fundulus_heteroclitus
ENSPCAG00000011879	RBM47	81	79.524	ENSGMOG00000014802	rbm47	81	78.333	Gadus_morhua
ENSPCAG00000011879	RBM47	63	92.553	ENSGALG00000014267	RBM47	100	92.308	Gallus_gallus
ENSPCAG00000011879	RBM47	64	83.554	ENSGAFG00000020571	rbm47	98	80.637	Gambusia_affinis
ENSPCAG00000011879	RBM47	81	78.846	ENSGACG00000016223	rbm47	89	75.879	Gasterosteus_aculeatus
ENSPCAG00000011879	RBM47	81	92.768	ENSGAGG00000020051	RBM47	81	92.519	Gopherus_agassizii
ENSPCAG00000011879	RBM47	81	97.500	ENSGGOG00000001367	RBM47	96	97.354	Gorilla_gorilla
ENSPCAG00000011879	RBM47	81	81.796	ENSHBUG00000003520	rbm47	88	78.680	Haplochromis_burtoni
ENSPCAG00000011879	RBM47	77	81.250	ENSHGLG00000016914	RBM47	100	95.570	Heterocephalus_glaber_female
ENSPCAG00000011879	RBM47	81	94.987	ENSHGLG00100014028	-	100	95.570	Heterocephalus_glaber_male
ENSPCAG00000011879	RBM47	79	89.567	ENSHGLG00100003071	-	80	89.567	Heterocephalus_glaber_male
ENSPCAG00000011879	RBM47	80	83.333	ENSHCOG00000002074	rbm47	88	79.188	Hippocampus_comes
ENSPCAG00000011879	RBM47	81	81.955	ENSIPUG00000004743	rbm47	84	79.328	Ictalurus_punctatus
ENSPCAG00000011879	RBM47	81	96.500	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSPCAG00000011879	RBM47	81	93.035	ENSJJAG00000013823	Rbm47	81	93.781	Jaculus_jaculus
ENSPCAG00000011879	RBM47	81	82.555	ENSKMAG00000000084	rbm47	89	77.889	Kryptolebias_marmoratus
ENSPCAG00000011879	RBM47	81	81.750	ENSLBEG00000008436	rbm47	87	79.028	Labrus_bergylta
ENSPCAG00000011879	RBM47	81	88.500	ENSLACG00000007196	RBM47	81	87.250	Latimeria_chalumnae
ENSPCAG00000011879	RBM47	81	87.250	ENSLOCG00000012966	rbm47	78	86.500	Lepisosteus_oculatus
ENSPCAG00000011879	RBM47	81	97.744	ENSLAFG00000011998	RBM47	81	97.744	Loxodonta_africana
ENSPCAG00000011879	RBM47	81	97.500	ENSMFAG00000037967	RBM47	96	97.354	Macaca_fascicularis
ENSPCAG00000011879	RBM47	81	97.500	ENSMMUG00000012036	RBM47	100	97.927	Macaca_mulatta
ENSPCAG00000011879	RBM47	81	97.250	ENSMNEG00000040774	RBM47	96	97.090	Macaca_nemestrina
ENSPCAG00000011879	RBM47	81	98.730	ENSMLEG00000041432	RBM47	98	98.730	Mandrillus_leucophaeus
ENSPCAG00000011879	RBM47	81	82.809	ENSMAMG00000019143	rbm47	89	79.494	Mastacembelus_armatus
ENSPCAG00000011879	RBM47	81	81.796	ENSMZEG00005023659	rbm47	86	79.692	Maylandia_zebra
ENSPCAG00000011879	RBM47	81	90.773	ENSMGAG00000012226	RBM47	81	91.521	Meleagris_gallopavo
ENSPCAG00000011879	RBM47	81	94.527	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSPCAG00000011879	RBM47	81	90.000	ENSMICG00000026417	RBM47	89	91.250	Microcebus_murinus
ENSPCAG00000011879	RBM47	81	95.262	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSPCAG00000011879	RBM47	81	80.387	ENSMMOG00000007260	rbm47	82	79.177	Mola_mola
ENSPCAG00000011879	RBM47	52	82.637	ENSMODG00000015426	-	97	79.808	Monodelphis_domestica
ENSPCAG00000011879	RBM47	80	84.250	ENSMODG00000020561	-	81	83.250	Monodelphis_domestica
ENSPCAG00000011879	RBM47	81	92.750	ENSMODG00000007003	RBM47	81	92.750	Monodelphis_domestica
ENSPCAG00000011879	RBM47	81	82.707	ENSMALG00000005167	rbm47	89	77.273	Monopterus_albus
ENSPCAG00000011879	RBM47	81	94.763	MGP_CAROLIEiJ_G0027258	Rbm47	100	94.304	Mus_caroli
ENSPCAG00000011879	RBM47	81	95.012	ENSMUSG00000070780	Rbm47	100	94.304	Mus_musculus
ENSPCAG00000011879	RBM47	81	95.012	MGP_PahariEiJ_G0017040	Rbm47	100	94.937	Mus_pahari
ENSPCAG00000011879	RBM47	81	95.012	MGP_SPRETEiJ_G0028253	Rbm47	100	94.304	Mus_spretus
ENSPCAG00000011879	RBM47	81	97.250	ENSMPUG00000006177	RBM47	76	97.250	Mustela_putorius_furo
ENSPCAG00000011879	RBM47	81	94.279	ENSMLUG00000000889	RBM47	81	93.035	Myotis_lucifugus
ENSPCAG00000011879	RBM47	81	94.763	ENSNGAG00000003325	Rbm47	81	94.763	Nannospalax_galili
ENSPCAG00000011879	RBM47	81	82.039	ENSNBRG00000015092	rbm47	81	79.612	Neolamprologus_brichardi
ENSPCAG00000011879	RBM47	81	97.500	ENSNLEG00000017151	RBM47	96	97.354	Nomascus_leucogenys
ENSPCAG00000011879	RBM47	61	93.333	ENSMEUG00000009516	-	84	93.333	Notamacropus_eugenii
ENSPCAG00000011879	RBM47	64	96.680	ENSOPRG00000016507	-	63	96.680	Ochotona_princeps
ENSPCAG00000011879	RBM47	81	95.750	ENSODEG00000004873	RBM47	81	95.750	Octodon_degus
ENSPCAG00000011879	RBM47	81	81.205	ENSONIG00000009061	rbm47	82	79.518	Oreochromis_niloticus
ENSPCAG00000011879	RBM47	81	88.614	ENSOANG00000008978	RBM47	82	88.614	Ornithorhynchus_anatinus
ENSPCAG00000011879	RBM47	81	95.262	ENSOCUG00000012034	RBM47	81	95.262	Oryctolagus_cuniculus
ENSPCAG00000011879	RBM47	81	83.500	ENSORLG00000005847	rbm47	89	77.215	Oryzias_latipes
ENSPCAG00000011879	RBM47	81	83.500	ENSORLG00020005154	rbm47	89	77.215	Oryzias_latipes_hni
ENSPCAG00000011879	RBM47	81	83.750	ENSORLG00015000066	rbm47	89	77.468	Oryzias_latipes_hsok
ENSPCAG00000011879	RBM47	81	83.459	ENSOMEG00000010730	rbm47	81	80.952	Oryzias_melastigma
ENSPCAG00000011879	RBM47	81	96.500	ENSOGAG00000029367	-	81	96.500	Otolemur_garnettii
ENSPCAG00000011879	RBM47	81	88.500	ENSOGAG00000025193	-	81	89.000	Otolemur_garnettii
ENSPCAG00000011879	RBM47	81	85.536	ENSOARG00000012711	RBM47	80	87.500	Ovis_aries
ENSPCAG00000011879	RBM47	81	97.500	ENSPPAG00000029763	RBM47	96	97.354	Pan_paniscus
ENSPCAG00000011879	RBM47	81	96.750	ENSPPRG00000012873	RBM47	92	95.822	Panthera_pardus
ENSPCAG00000011879	RBM47	66	96.785	ENSPTIG00000017046	RBM47	80	96.785	Panthera_tigris_altaica
ENSPCAG00000011879	RBM47	81	97.500	ENSPTRG00000016006	RBM47	96	97.354	Pan_troglodytes
ENSPCAG00000011879	RBM47	81	97.500	ENSPANG00000005980	RBM47	96	97.090	Papio_anubis
ENSPCAG00000011879	RBM47	77	86.280	ENSPKIG00000013431	RBM47	87	81.955	Paramormyrops_kingsleyae
ENSPCAG00000011879	RBM47	77	83.905	ENSPKIG00000005037	rbm47	82	78.431	Paramormyrops_kingsleyae
ENSPCAG00000011879	RBM47	67	92.269	ENSPSIG00000017516	RBM47	74	92.020	Pelodiscus_sinensis
ENSPCAG00000011879	RBM47	81	83.208	ENSPMGG00000018540	rbm47	81	81.454	Periophthalmus_magnuspinnatus
ENSPCAG00000011879	RBM47	81	95.262	ENSPEMG00000011088	Rbm47	88	94.256	Peromyscus_maniculatus_bairdii
ENSPCAG00000011879	RBM47	77	86.243	ENSPFOG00000007997	rbm47	81	78.554	Poecilia_formosa
ENSPCAG00000011879	RBM47	77	85.979	ENSPLAG00000002072	rbm47	88	79.790	Poecilia_latipinna
ENSPCAG00000011879	RBM47	81	83.709	ENSPMEG00000017492	rbm47	88	77.638	Poecilia_mexicana
ENSPCAG00000011879	RBM47	77	86.243	ENSPREG00000008456	rbm47	88	80.052	Poecilia_reticulata
ENSPCAG00000011879	RBM47	79	84.987	ENSPPYG00000014688	RBM47	66	84.733	Pongo_abelii
ENSPCAG00000011879	RBM47	81	92.481	ENSPCOG00000023451	RBM47	89	91.601	Propithecus_coquereli
ENSPCAG00000011879	RBM47	81	96.020	ENSPVAG00000003812	RBM47	81	96.020	Pteropus_vampyrus
ENSPCAG00000011879	RBM47	81	81.796	ENSPNYG00000022868	rbm47	81	79.369	Pundamilia_nyererei
ENSPCAG00000011879	RBM47	81	80.630	ENSPNAG00000007940	rbm47	83	79.903	Pygocentrus_nattereri
ENSPCAG00000011879	RBM47	81	95.012	ENSRNOG00000002408	Rbm47	81	94.763	Rattus_norvegicus
ENSPCAG00000011879	RBM47	81	97.500	ENSRBIG00000039601	RBM47	96	97.354	Rhinopithecus_bieti
ENSPCAG00000011879	RBM47	81	97.500	ENSRROG00000044696	RBM47	96	97.354	Rhinopithecus_roxellana
ENSPCAG00000011879	RBM47	81	97.000	ENSSBOG00000028475	RBM47	97	96.817	Saimiri_boliviensis_boliviensis
ENSPCAG00000011879	RBM47	81	93.000	ENSSHAG00000017576	RBM47	81	93.000	Sarcophilus_harrisii
ENSPCAG00000011879	RBM47	81	81.068	ENSSFOG00015012445	rbm47	82	80.097	Scleropages_formosus
ENSPCAG00000011879	RBM47	80	80.353	ENSSFOG00015024101	RBM47	81	79.597	Scleropages_formosus
ENSPCAG00000011879	RBM47	81	80.193	ENSSMAG00000009744	rbm47	89	76.515	Scophthalmus_maximus
ENSPCAG00000011879	RBM47	81	84.250	ENSSDUG00000022684	rbm47	81	81.500	Seriola_dumerili
ENSPCAG00000011879	RBM47	81	84.712	ENSSLDG00000003109	rbm47	89	77.363	Seriola_lalandi_dorsalis
ENSPCAG00000011879	RBM47	77	94.307	ENSSARG00000001735	RBM47	77	94.059	Sorex_araneus
ENSPCAG00000011879	RBM47	81	90.750	ENSSPUG00000007515	RBM47	89	89.418	Sphenodon_punctatus
ENSPCAG00000011879	RBM47	81	84.962	ENSSPAG00000001257	rbm47	89	78.894	Stegastes_partitus
ENSPCAG00000011879	RBM47	81	96.509	ENSSSCG00000008796	RBM47	81	96.509	Sus_scrofa
ENSPCAG00000011879	RBM47	81	92.269	ENSTGUG00000008705	RBM47	81	91.771	Taeniopygia_guttata
ENSPCAG00000011879	RBM47	79	84.278	ENSTRUG00000014050	rbm47	81	82.732	Takifugu_rubripes
ENSPCAG00000011879	RBM47	81	81.840	ENSTNIG00000006127	rbm47	82	80.387	Tetraodon_nigroviridis
ENSPCAG00000011879	RBM47	77	90.400	ENSTBEG00000001607	RBM47	76	90.133	Tupaia_belangeri
ENSPCAG00000011879	RBM47	81	96.758	ENSTTRG00000002839	RBM47	81	96.758	Tursiops_truncatus
ENSPCAG00000011879	RBM47	81	97.000	ENSUAMG00000021346	RBM47	81	97.000	Ursus_americanus
ENSPCAG00000011879	RBM47	77	96.296	ENSVVUG00000014774	RBM47	81	94.030	Vulpes_vulpes
ENSPCAG00000011879	RBM47	81	87.097	ENSXETG00000012802	rbm47	92	86.280	Xenopus_tropicalis
ENSPCAG00000011879	RBM47	78	82.677	ENSXCOG00000000780	rbm47	88	79.790	Xiphophorus_couchianus
ENSPCAG00000011879	RBM47	81	83.459	ENSXMAG00000009874	rbm47	89	77.387	Xiphophorus_maculatus