EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000011934 (Gene tree)
Gene ID: -
Gene Symbol: SNAI1
Alias: SLUGH2|SNA|SNAH|SNAIL|SNAIL1
Full Name: snail family transcriptional repressor 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 5679 bases
Position: chrscaffold_36884:315-5993
Accession: 11128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011091	zf-C2H2	PF00096.26	3.9e-21	1	4
ENSPCAP00000011091	zf-C2H2	PF00096.26	3.9e-21	2	4
ENSPCAP00000011091	zf-C2H2	PF00096.26	3.9e-21	3	4
ENSPCAP00000011091	zf-C2H2	PF00096.26	3.9e-21	4	4
ENSPCAP00000011091	zf-met	PF12874.7	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011873	SNAI1-201	711	-	ENSPCAP00000011091	237 (aa)	-	UPI00018AD69F

Gene Model

Click here to download ENSPCAG00000011934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000011934	SNAI1	50	41.558	ENSPCAG00000001613	-	62	41.558
ENSPCAG00000011934	SNAI1	92	47.170	ENSPCAG00000009106	-	69	47.170
ENSPCAG00000011934	SNAI1	52	45.946	ENSPCAG00000005270	-	52	45.946
ENSPCAG00000011934	SNAI1	51	43.038	ENSPCAG00000015262	ZFP69B	58	43.038
ENSPCAG00000011934	SNAI1	52	42.169	ENSPCAG00000012543	ZNF234	81	42.169
ENSPCAG00000011934	SNAI1	59	77.857	ENSPCAG00000001788	-	50	78.417
ENSPCAG00000011934	SNAI1	50	43.137	ENSPCAG00000011671	PRDM5	60	43.137
ENSPCAG00000011934	SNAI1	52	41.111	ENSPCAG00000000862	-	85	39.000
ENSPCAG00000011934	SNAI1	51	41.748	ENSPCAG00000007476	-	81	41.748
ENSPCAG00000011934	SNAI1	56	42.453	ENSPCAG00000016939	ZNF2	64	42.453
ENSPCAG00000011934	SNAI1	50	41.237	ENSPCAG00000004217	-	91	41.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011934	SNAI1	99	87.288	ENSG00000124216	SNAI1	89	87.288	Homo_sapiens
ENSPCAG00000011934	SNAI1	92	55.652	ENSAPOG00000003886	snai2	66	56.087	Acanthochromis_polyacanthus
ENSPCAG00000011934	SNAI1	99	90.254	ENSAMEG00000013478	SNAI1	89	90.254	Ailuropoda_melanoleuca
ENSPCAG00000011934	SNAI1	58	65.972	ENSACIG00000009443	-	54	65.972	Amphilophus_citrinellus
ENSPCAG00000011934	SNAI1	92	56.087	ENSACIG00000018641	snai2	84	56.637	Amphilophus_citrinellus
ENSPCAG00000011934	SNAI1	92	56.087	ENSAOCG00000017968	snai2	84	55.310	Amphiprion_ocellaris
ENSPCAG00000011934	SNAI1	92	56.087	ENSAPEG00000002983	snai2	84	55.310	Amphiprion_percula
ENSPCAG00000011934	SNAI1	88	55.455	ENSATEG00000006892	snai2	84	55.752	Anabas_testudineus
ENSPCAG00000011934	SNAI1	93	65.766	ENSAPLG00000014633	-	93	66.667	Anas_platyrhynchos
ENSPCAG00000011934	SNAI1	91	54.936	ENSAPLG00000003920	-	86	55.085	Anas_platyrhynchos
ENSPCAG00000011934	SNAI1	94	54.400	ENSACAG00000012332	-	86	55.932	Anolis_carolinensis
ENSPCAG00000011934	SNAI1	93	57.642	ENSACAG00000015607	SNAI1	89	56.170	Anolis_carolinensis
ENSPCAG00000011934	SNAI1	99	87.712	ENSANAG00000028666	SNAI1	89	87.712	Aotus_nancymaae
ENSPCAG00000011934	SNAI1	92	58.904	ENSACLG00000018551	snai2	83	58.904	Astatotilapia_calliptera
ENSPCAG00000011934	SNAI1	97	56.667	ENSAMXG00000038235	snai2	88	56.667	Astyanax_mexicanus
ENSPCAG00000011934	SNAI1	99	90.678	ENSBTAG00000014554	SNAI1	89	90.678	Bos_taurus
ENSPCAG00000011934	SNAI1	99	88.559	ENSCJAG00000000518	SNAI1	89	88.559	Callithrix_jacchus
ENSPCAG00000011934	SNAI1	99	89.831	ENSCAFG00000011499	SNAI1	99	89.831	Canis_familiaris
ENSPCAG00000011934	SNAI1	99	89.831	ENSCAFG00020017479	SNAI1	89	89.831	Canis_lupus_dingo
ENSPCAG00000011934	SNAI1	99	91.102	ENSCHIG00000014308	SNAI1	89	91.102	Capra_hircus
ENSPCAG00000011934	SNAI1	99	89.831	ENSTSYG00000010834	SNAI1	89	89.831	Carlito_syrichta
ENSPCAG00000011934	SNAI1	99	88.983	ENSCAPG00000014002	SNAI1	92	88.983	Cavia_aperea
ENSPCAG00000011934	SNAI1	99	88.983	ENSCPOG00000026663	SNAI1	89	88.983	Cavia_porcellus
ENSPCAG00000011934	SNAI1	94	52.917	ENSCPOG00000033449	-	86	54.237	Cavia_porcellus
ENSPCAG00000011934	SNAI1	99	88.136	ENSCCAG00000029550	SNAI1	89	88.136	Cebus_capucinus
ENSPCAG00000011934	SNAI1	99	88.983	ENSCATG00000041452	SNAI1	89	88.983	Cercocebus_atys
ENSPCAG00000011934	SNAI1	99	87.712	ENSCLAG00000012285	SNAI1	89	87.712	Chinchilla_lanigera
ENSPCAG00000011934	SNAI1	99	88.983	ENSCSAG00000015065	SNAI1	89	88.983	Chlorocebus_sabaeus
ENSPCAG00000011934	SNAI1	92	55.918	ENSCHOG00000007046	-	88	55.085	Choloepus_hoffmanni
ENSPCAG00000011934	SNAI1	99	88.559	ENSCANG00000036400	SNAI1	89	88.559	Colobus_angolensis_palliatus
ENSPCAG00000011934	SNAI1	99	87.288	ENSCGRG00001007749	Snai1	89	87.288	Cricetulus_griseus_chok1gshd
ENSPCAG00000011934	SNAI1	99	87.288	ENSCGRG00000009080	Snai1	89	87.288	Cricetulus_griseus_crigri
ENSPCAG00000011934	SNAI1	92	55.217	ENSCSEG00000010311	snai2	84	54.978	Cynoglossus_semilaevis
ENSPCAG00000011934	SNAI1	92	55.263	ENSCVAG00000016483	snai2	81	55.752	Cyprinodon_variegatus
ENSPCAG00000011934	SNAI1	92	54.386	ENSDARG00000056995	snai1a	87	54.185	Danio_rerio
ENSPCAG00000011934	SNAI1	97	57.322	ENSDARG00000040046	snai2	88	55.649	Danio_rerio
ENSPCAG00000011934	SNAI1	94	55.020	ENSDNOG00000035997	-	86	55.085	Dasypus_novemcinctus
ENSPCAG00000011934	SNAI1	99	76.793	ENSDNOG00000024891	-	89	76.371	Dasypus_novemcinctus
ENSPCAG00000011934	SNAI1	99	94.492	ENSDNOG00000023834	-	89	94.492	Dasypus_novemcinctus
ENSPCAG00000011934	SNAI1	99	84.100	ENSDORG00000025372	Snai1	99	84.100	Dipodomys_ordii
ENSPCAG00000011934	SNAI1	94	49.580	ENSETEG00000005777	-	86	48.945	Echinops_telfairi
ENSPCAG00000011934	SNAI1	94	52.917	ENSEASG00005009186	-	86	53.750	Equus_asinus_asinus
ENSPCAG00000011934	SNAI1	94	52.917	ENSECAG00000010120	SNAI2	86	53.750	Equus_caballus
ENSPCAG00000011934	SNAI1	99	89.451	ENSECAG00000009787	SNAI1	89	89.451	Equus_caballus
ENSPCAG00000011934	SNAI1	69	63.190	ENSELUG00000002056	SNAI1	50	75.000	Esox_lucius
ENSPCAG00000011934	SNAI1	94	52.917	ENSFCAG00000015779	-	86	54.430	Felis_catus
ENSPCAG00000011934	SNAI1	99	89.407	ENSFCAG00000010558	SNAI1	89	89.407	Felis_catus
ENSPCAG00000011934	SNAI1	91	54.936	ENSFALG00000005762	-	86	55.085	Ficedula_albicollis
ENSPCAG00000011934	SNAI1	99	89.407	ENSFDAG00000005851	SNAI1	89	89.407	Fukomys_damarensis
ENSPCAG00000011934	SNAI1	92	55.263	ENSFHEG00000012561	snai2	84	55.752	Fundulus_heteroclitus
ENSPCAG00000011934	SNAI1	97	54.733	ENSGMOG00000002669	snai2	88	53.975	Gadus_morhua
ENSPCAG00000011934	SNAI1	71	68.639	ENSGALG00000030902	-	50	79.412	Gallus_gallus
ENSPCAG00000011934	SNAI1	94	64.889	ENSGALG00000008018	SNAI1	85	64.889	Gallus_gallus
ENSPCAG00000011934	SNAI1	92	56.140	ENSGAFG00000021427	snai2	84	56.195	Gambusia_affinis
ENSPCAG00000011934	SNAI1	92	54.626	ENSGACG00000017935	snai2	83	55.111	Gasterosteus_aculeatus
ENSPCAG00000011934	SNAI1	93	62.832	ENSGAGG00000022705	SNAI1	87	62.389	Gopherus_agassizii
ENSPCAG00000011934	SNAI1	99	88.559	ENSGGOG00000024422	SNAI1	89	88.559	Gorilla_gorilla
ENSPCAG00000011934	SNAI1	92	58.904	ENSHBUG00000007764	snai2	83	58.904	Haplochromis_burtoni
ENSPCAG00000011934	SNAI1	99	90.678	ENSHGLG00000005310	SNAI1	89	90.678	Heterocephalus_glaber_female
ENSPCAG00000011934	SNAI1	94	52.917	ENSHGLG00000009439	SNAI2	86	54.237	Heterocephalus_glaber_female
ENSPCAG00000011934	SNAI1	99	90.678	ENSHGLG00100018390	SNAI1	89	90.678	Heterocephalus_glaber_male
ENSPCAG00000011934	SNAI1	94	52.917	ENSHGLG00100007484	SNAI2	86	54.237	Heterocephalus_glaber_male
ENSPCAG00000011934	SNAI1	71	63.584	ENSHCOG00000020556	-	54	70.629	Hippocampus_comes
ENSPCAG00000011934	SNAI1	99	90.678	ENSSTOG00000005866	SNAI1	89	90.678	Ictidomys_tridecemlineatus
ENSPCAG00000011934	SNAI1	99	86.864	ENSJJAG00000017317	Snai1	89	88.983	Jaculus_jaculus
ENSPCAG00000011934	SNAI1	94	52.917	ENSJJAG00000017495	-	86	54.237	Jaculus_jaculus
ENSPCAG00000011934	SNAI1	92	54.348	ENSKMAG00000005164	snai2	84	56.388	Kryptolebias_marmoratus
ENSPCAG00000011934	SNAI1	92	54.825	ENSLBEG00000000972	snai2	89	55.652	Labrus_bergylta
ENSPCAG00000011934	SNAI1	92	55.696	ENSLACG00000005413	snai2	84	57.872	Latimeria_chalumnae
ENSPCAG00000011934	SNAI1	94	59.740	ENSLACG00000017707	SNAI1	85	59.912	Latimeria_chalumnae
ENSPCAG00000011934	SNAI1	85	56.542	ENSLOCG00000004443	snai1a	77	54.950	Lepisosteus_oculatus
ENSPCAG00000011934	SNAI1	99	97.458	ENSLAFG00000030265	SNAI1	89	97.458	Loxodonta_africana
ENSPCAG00000011934	SNAI1	99	88.983	ENSMFAG00000000994	SNAI1	89	88.983	Macaca_fascicularis
ENSPCAG00000011934	SNAI1	99	88.559	ENSMNEG00000036933	SNAI1	89	88.559	Macaca_nemestrina
ENSPCAG00000011934	SNAI1	99	88.983	ENSMLEG00000039236	SNAI1	89	88.983	Mandrillus_leucophaeus
ENSPCAG00000011934	SNAI1	92	56.087	ENSMAMG00000015632	snai2	84	56.522	Mastacembelus_armatus
ENSPCAG00000011934	SNAI1	92	58.904	ENSMZEG00005025060	snai2	83	58.904	Maylandia_zebra
ENSPCAG00000011934	SNAI1	91	54.936	ENSMGAG00000010813	-	86	55.085	Meleagris_gallopavo
ENSPCAG00000011934	SNAI1	94	64.889	ENSMGAG00000009447	SNAI1	85	64.889	Meleagris_gallopavo
ENSPCAG00000011934	SNAI1	99	88.559	ENSMAUG00000021592	Snai1	89	88.559	Mesocricetus_auratus
ENSPCAG00000011934	SNAI1	99	89.831	ENSMICG00000042228	SNAI1	89	89.831	Microcebus_murinus
ENSPCAG00000011934	SNAI1	92	56.034	ENSMICG00000000335	-	86	55.085	Microcebus_murinus
ENSPCAG00000011934	SNAI1	99	88.983	ENSMOCG00000007847	Snai1	89	88.983	Microtus_ochrogaster
ENSPCAG00000011934	SNAI1	66	68.902	ENSMMOG00000016695	snai2	55	77.778	Mola_mola
ENSPCAG00000011934	SNAI1	96	63.866	ENSMODG00000016309	SNAI1	87	60.000	Monodelphis_domestica
ENSPCAG00000011934	SNAI1	92	58.904	ENSMALG00000021318	snai2	83	58.904	Monopterus_albus
ENSPCAG00000011934	SNAI1	99	87.712	MGP_CAROLIEiJ_G0024709	Snai1	89	87.712	Mus_caroli
ENSPCAG00000011934	SNAI1	99	87.288	ENSMUSG00000042821	Snai1	89	87.288	Mus_musculus
ENSPCAG00000011934	SNAI1	99	87.712	MGP_PahariEiJ_G0026151	Snai1	89	87.712	Mus_pahari
ENSPCAG00000011934	SNAI1	99	87.712	MGP_SPRETEiJ_G0025629	Snai1	89	87.712	Mus_spretus
ENSPCAG00000011934	SNAI1	99	90.678	ENSMPUG00000017558	SNAI1	89	90.678	Mustela_putorius_furo
ENSPCAG00000011934	SNAI1	99	90.254	ENSMLUG00000015053	-	89	90.254	Myotis_lucifugus
ENSPCAG00000011934	SNAI1	99	81.702	ENSMLUG00000011649	-	89	80.851	Myotis_lucifugus
ENSPCAG00000011934	SNAI1	99	89.407	ENSNGAG00000017185	Snai1	89	89.407	Nannospalax_galili
ENSPCAG00000011934	SNAI1	94	53.112	ENSNGAG00000009442	-	86	54.008	Nannospalax_galili
ENSPCAG00000011934	SNAI1	92	58.904	ENSNBRG00000011785	snai2	83	58.904	Neolamprologus_brichardi
ENSPCAG00000011934	SNAI1	99	88.983	ENSNLEG00000006985	SNAI1	89	88.983	Nomascus_leucogenys
ENSPCAG00000011934	SNAI1	99	88.608	ENSODEG00000007856	SNAI1	89	88.608	Octodon_degus
ENSPCAG00000011934	SNAI1	94	52.917	ENSODEG00000003654	-	86	54.237	Octodon_degus
ENSPCAG00000011934	SNAI1	92	55.652	ENSONIG00000009542	snai2	84	56.195	Oreochromis_niloticus
ENSPCAG00000011934	SNAI1	96	61.765	ENSOANG00000008681	SNAI1	91	60.251	Ornithorhynchus_anatinus
ENSPCAG00000011934	SNAI1	94	52.893	ENSOCUG00000012254	-	86	54.237	Oryctolagus_cuniculus
ENSPCAG00000011934	SNAI1	99	86.017	ENSOCUG00000005422	SNAI1	97	86.017	Oryctolagus_cuniculus
ENSPCAG00000011934	SNAI1	92	56.897	ENSORLG00000017475	snai2	84	54.867	Oryzias_latipes
ENSPCAG00000011934	SNAI1	92	56.897	ENSORLG00020008787	snai2	84	54.867	Oryzias_latipes_hni
ENSPCAG00000011934	SNAI1	92	56.897	ENSORLG00015008609	snai2	84	54.867	Oryzias_latipes_hsok
ENSPCAG00000011934	SNAI1	57	67.133	ENSOMEG00000012928	-	54	67.133	Oryzias_melastigma
ENSPCAG00000011934	SNAI1	92	58.371	ENSOMEG00000006591	snai2	83	57.919	Oryzias_melastigma
ENSPCAG00000011934	SNAI1	99	89.831	ENSOGAG00000030111	SNAI1	89	89.831	Otolemur_garnettii
ENSPCAG00000011934	SNAI1	94	52.917	ENSOGAG00000010500	-	86	54.237	Otolemur_garnettii
ENSPCAG00000011934	SNAI1	99	87.712	ENSOARG00000013174	SNAI1	68	90.678	Ovis_aries
ENSPCAG00000011934	SNAI1	99	88.559	ENSPPAG00000041096	SNAI1	89	88.559	Pan_paniscus
ENSPCAG00000011934	SNAI1	99	89.407	ENSPPRG00000013272	SNAI1	89	89.407	Panthera_pardus
ENSPCAG00000011934	SNAI1	99	88.559	ENSPTRG00000050285	SNAI1	89	88.559	Pan_troglodytes
ENSPCAG00000011934	SNAI1	99	88.983	ENSPANG00000007536	SNAI1	89	88.983	Papio_anubis
ENSPCAG00000011934	SNAI1	50	80.672	ENSPKIG00000006393	snai1a	85	53.982	Paramormyrops_kingsleyae
ENSPCAG00000011934	SNAI1	93	63.596	ENSPSIG00000003607	SNAI1	84	62.832	Pelodiscus_sinensis
ENSPCAG00000011934	SNAI1	99	88.559	ENSPEMG00000023213	Snai1	89	88.559	Peromyscus_maniculatus_bairdii
ENSPCAG00000011934	SNAI1	96	65.517	ENSPCIG00000023282	SNAI1	87	63.333	Phascolarctos_cinereus
ENSPCAG00000011934	SNAI1	92	55.702	ENSPFOG00000014336	snai2	84	55.752	Poecilia_formosa
ENSPCAG00000011934	SNAI1	92	55.702	ENSPLAG00000009941	snai2	84	55.752	Poecilia_latipinna
ENSPCAG00000011934	SNAI1	92	55.702	ENSPMEG00000024022	snai2	84	55.752	Poecilia_mexicana
ENSPCAG00000011934	SNAI1	99	88.559	ENSPPYG00000011122	SNAI1	89	88.559	Pongo_abelii
ENSPCAG00000011934	SNAI1	99	89.831	ENSPCOG00000020538	SNAI1	89	89.831	Propithecus_coquereli
ENSPCAG00000011934	SNAI1	99	89.076	ENSPVAG00000004119	SNAI1	89	89.076	Pteropus_vampyrus
ENSPCAG00000011934	SNAI1	92	58.904	ENSPNYG00000015217	snai2	83	58.904	Pundamilia_nyererei
ENSPCAG00000011934	SNAI1	97	56.379	ENSPNAG00000015896	snai2	88	55.556	Pygocentrus_nattereri
ENSPCAG00000011934	SNAI1	94	53.815	ENSRNOG00000047699	Snai2	86	54.008	Rattus_norvegicus
ENSPCAG00000011934	SNAI1	99	88.136	ENSRNOG00000009594	Snai1	93	88.136	Rattus_norvegicus
ENSPCAG00000011934	SNAI1	99	88.136	ENSRBIG00000026992	SNAI1	89	88.136	Rhinopithecus_bieti
ENSPCAG00000011934	SNAI1	99	88.136	ENSRROG00000043753	SNAI1	89	88.136	Rhinopithecus_roxellana
ENSPCAG00000011934	SNAI1	99	88.608	ENSSBOG00000034760	SNAI1	89	88.608	Saimiri_boliviensis_boliviensis
ENSPCAG00000011934	SNAI1	96	64.378	ENSSHAG00000011015	SNAI1	87	60.699	Sarcophilus_harrisii
ENSPCAG00000011934	SNAI1	92	57.143	ENSSFOG00015021578	snai1a	84	55.357	Scleropages_formosus
ENSPCAG00000011934	SNAI1	70	61.714	ENSSMAG00000008834	-	52	67.361	Scophthalmus_maximus
ENSPCAG00000011934	SNAI1	92	55.702	ENSSMAG00000019364	snai2	84	55.752	Scophthalmus_maximus
ENSPCAG00000011934	SNAI1	92	56.087	ENSSDUG00000018060	snai2	84	55.310	Seriola_dumerili
ENSPCAG00000011934	SNAI1	92	58.904	ENSSLDG00000012852	snai2	83	58.904	Seriola_lalandi_dorsalis
ENSPCAG00000011934	SNAI1	93	60.870	ENSSPUG00000018057	SNAI1	85	58.222	Sphenodon_punctatus
ENSPCAG00000011934	SNAI1	92	56.087	ENSSPAG00000022061	snai2	84	55.310	Stegastes_partitus
ENSPCAG00000011934	SNAI1	99	92.373	ENSSSCG00000032613	SNAI1	95	92.373	Sus_scrofa
ENSPCAG00000011934	SNAI1	93	63.348	ENSTGUG00000008724	SNAI1	84	66.216	Taeniopygia_guttata
ENSPCAG00000011934	SNAI1	91	54.936	ENSTGUG00000010914	-	86	55.085	Taeniopygia_guttata
ENSPCAG00000011934	SNAI1	92	55.702	ENSTRUG00000025588	snai2	84	56.522	Takifugu_rubripes
ENSPCAG00000011934	SNAI1	92	56.087	ENSTNIG00000008504	snai2	84	56.522	Tetraodon_nigroviridis
ENSPCAG00000011934	SNAI1	81	87.500	ENSTBEG00000012262	SNAI1	99	85.938	Tupaia_belangeri
ENSPCAG00000011934	SNAI1	99	91.949	ENSTTRG00000002029	SNAI1	89	91.949	Tursiops_truncatus
ENSPCAG00000011934	SNAI1	99	84.322	ENSUAMG00000026603	SNAI1	89	82.203	Ursus_americanus
ENSPCAG00000011934	SNAI1	99	90.678	ENSUMAG00000024458	SNAI1	96	90.678	Ursus_maritimus
ENSPCAG00000011934	SNAI1	99	90.254	ENSVVUG00000022410	SNAI1	89	90.254	Vulpes_vulpes
ENSPCAG00000011934	SNAI1	96	58.577	ENSXETG00000027366	snai1	87	56.170	Xenopus_tropicalis
ENSPCAG00000011934	SNAI1	92	55.702	ENSXCOG00000015084	snai2	84	55.752	Xiphophorus_couchianus
ENSPCAG00000011934	SNAI1	92	55.702	ENSXMAG00000019030	snai2	84	55.752	Xiphophorus_maculatus
ENSPCAG00000011934	SNAI1	68	63.743	ENSXMAG00000015281	-	50	75.194	Xiphophorus_maculatus