EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000011991 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 13974 bases
Position: chrscaffold_51427:776-14749
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011168	zf-U11-48K	PF05253.12	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000011957	SNRNP48-201	804	-	ENSPCAP00000011168	268 (aa)	-	UPI00018AD4A2

Gene Model

Click here to download ENSPCAG00000011991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000011991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000011991	SNRNP48	99	71.161	ENSG00000168566	SNRNP48	92	76.642	Homo_sapiens
ENSPCAG00000011991	SNRNP48	93	37.849	ENSAPOG00000021430	snrnp48	71	36.508	Acanthochromis_polyacanthus
ENSPCAG00000011991	SNRNP48	99	70.787	ENSAMEG00000017349	SNRNP48	77	69.288	Ailuropoda_melanoleuca
ENSPCAG00000011991	SNRNP48	93	36.145	ENSACIG00000002032	snrnp48	71	35.772	Amphilophus_citrinellus
ENSPCAG00000011991	SNRNP48	93	37.849	ENSAOCG00000010562	snrnp48	71	36.508	Amphiprion_ocellaris
ENSPCAG00000011991	SNRNP48	93	37.200	ENSAPEG00000003231	snrnp48	71	35.857	Amphiprion_percula
ENSPCAG00000011991	SNRNP48	91	40.081	ENSATEG00000020210	snrnp48	72	37.255	Anabas_testudineus
ENSPCAG00000011991	SNRNP48	78	52.358	ENSACAG00000002811	SNRNP48	64	52.381	Anolis_carolinensis
ENSPCAG00000011991	SNRNP48	99	70.787	ENSANAG00000033538	SNRNP48	79	70.787	Aotus_nancymaae
ENSPCAG00000011991	SNRNP48	97	38.346	ENSAMXG00000015309	snrnp48	72	37.302	Astyanax_mexicanus
ENSPCAG00000011991	SNRNP48	99	69.030	ENSBTAG00000001123	SNRNP48	79	68.657	Bos_taurus
ENSPCAG00000011991	SNRNP48	99	70.037	ENSCJAG00000021330	SNRNP48	79	70.037	Callithrix_jacchus
ENSPCAG00000011991	SNRNP48	98	70.611	ENSCAFG00000009574	SNRNP48	65	70.611	Canis_familiaris
ENSPCAG00000011991	SNRNP48	98	70.611	ENSCAFG00020013203	SNRNP48	79	69.776	Canis_lupus_dingo
ENSPCAG00000011991	SNRNP48	99	70.149	ENSCHIG00000015216	SNRNP48	79	69.776	Capra_hircus
ENSPCAG00000011991	SNRNP48	99	70.412	ENSTSYG00000000698	SNRNP48	79	70.412	Carlito_syrichta
ENSPCAG00000011991	SNRNP48	88	64.407	ENSCAPG00000006768	SNRNP48	77	64.407	Cavia_aperea
ENSPCAG00000011991	SNRNP48	99	70.037	ENSCPOG00000007910	SNRNP48	79	70.037	Cavia_porcellus
ENSPCAG00000011991	SNRNP48	99	69.663	ENSCCAG00000035652	SNRNP48	79	69.663	Cebus_capucinus
ENSPCAG00000011991	SNRNP48	99	70.787	ENSCATG00000033947	SNRNP48	98	75.177	Cercocebus_atys
ENSPCAG00000011991	SNRNP48	99	69.663	ENSCLAG00000003765	SNRNP48	79	69.663	Chinchilla_lanigera
ENSPCAG00000011991	SNRNP48	99	70.787	ENSCSAG00000007409	SNRNP48	79	70.787	Chlorocebus_sabaeus
ENSPCAG00000011991	SNRNP48	78	54.717	ENSCPBG00000019146	SNRNP48	64	55.610	Chrysemys_picta_bellii
ENSPCAG00000011991	SNRNP48	99	70.787	ENSCANG00000030017	SNRNP48	79	70.787	Colobus_angolensis_palliatus
ENSPCAG00000011991	SNRNP48	100	58.088	ENSCGRG00001008805	-	79	58.088	Cricetulus_griseus_chok1gshd
ENSPCAG00000011991	SNRNP48	99	68.539	ENSCGRG00001001076	-	79	68.539	Cricetulus_griseus_chok1gshd
ENSPCAG00000011991	SNRNP48	99	68.539	ENSCGRG00000007781	Snrnp48	79	68.539	Cricetulus_griseus_crigri
ENSPCAG00000011991	SNRNP48	97	37.931	ENSCSEG00000000722	snrnp48	69	36.800	Cynoglossus_semilaevis
ENSPCAG00000011991	SNRNP48	99	39.925	ENSCVAG00000019829	snrnp48	62	38.095	Cyprinodon_variegatus
ENSPCAG00000011991	SNRNP48	95	37.402	ENSDARG00000039989	snrnp48	70	36.214	Danio_rerio
ENSPCAG00000011991	SNRNP48	98	71.212	ENSDNOG00000014978	SNRNP48	96	75.758	Dasypus_novemcinctus
ENSPCAG00000011991	SNRNP48	99	68.421	ENSDORG00000015140	Snrnp48	72	80.769	Dipodomys_ordii
ENSPCAG00000011991	SNRNP48	99	72.285	ENSEASG00005012021	SNRNP48	79	72.285	Equus_asinus_asinus
ENSPCAG00000011991	SNRNP48	99	72.659	ENSECAG00000026937	SNRNP48	79	72.659	Equus_caballus
ENSPCAG00000011991	SNRNP48	97	70.992	ENSEEUG00000015437	SNRNP48	77	70.992	Erinaceus_europaeus
ENSPCAG00000011991	SNRNP48	94	40.000	ENSELUG00000009766	snrnp48	67	37.959	Esox_lucius
ENSPCAG00000011991	SNRNP48	99	69.288	ENSFCAG00000018853	SNRNP48	79	69.288	Felis_catus
ENSPCAG00000011991	SNRNP48	77	53.883	ENSFALG00000007797	SNRNP48	65	53.695	Ficedula_albicollis
ENSPCAG00000011991	SNRNP48	99	70.455	ENSFDAG00000009231	SNRNP48	78	70.455	Fukomys_damarensis
ENSPCAG00000011991	SNRNP48	75	42.079	ENSFHEG00000014647	snrnp48	72	41.315	Fundulus_heteroclitus
ENSPCAG00000011991	SNRNP48	94	35.521	ENSGMOG00000018599	-	82	36.000	Gadus_morhua
ENSPCAG00000011991	SNRNP48	78	52.857	ENSGALG00000013005	SNRNP48	68	52.970	Gallus_gallus
ENSPCAG00000011991	SNRNP48	97	38.314	ENSGAFG00000021639	snrnp48	70	37.751	Gambusia_affinis
ENSPCAG00000011991	SNRNP48	95	36.923	ENSGACG00000017756	-	72	35.968	Gasterosteus_aculeatus
ENSPCAG00000011991	SNRNP48	78	54.286	ENSGAGG00000000865	SNRNP48	67	55.122	Gopherus_agassizii
ENSPCAG00000011991	SNRNP48	99	71.161	ENSGGOG00000013220	SNRNP48	79	71.161	Gorilla_gorilla
ENSPCAG00000011991	SNRNP48	94	38.281	ENSHBUG00000017066	snrnp48	71	37.500	Haplochromis_burtoni
ENSPCAG00000011991	SNRNP48	99	69.663	ENSHGLG00000015241	SNRNP48	79	69.663	Heterocephalus_glaber_female
ENSPCAG00000011991	SNRNP48	99	69.663	ENSHGLG00100010027	SNRNP48	79	69.663	Heterocephalus_glaber_male
ENSPCAG00000011991	SNRNP48	90	33.745	ENSHCOG00000014066	snrnp48	69	32.661	Hippocampus_comes
ENSPCAG00000011991	SNRNP48	99	71.910	ENSSTOG00000014635	SNRNP48	73	85.714	Ictidomys_tridecemlineatus
ENSPCAG00000011991	SNRNP48	99	68.165	ENSJJAG00000011495	Snrnp48	79	68.165	Jaculus_jaculus
ENSPCAG00000011991	SNRNP48	93	36.653	ENSKMAG00000016514	snrnp48	72	35.686	Kryptolebias_marmoratus
ENSPCAG00000011991	SNRNP48	97	36.782	ENSLBEG00000026249	snrnp48	72	35.827	Labrus_bergylta
ENSPCAG00000011991	SNRNP48	92	45.418	ENSLACG00000003958	SNRNP48	72	44.758	Latimeria_chalumnae
ENSPCAG00000011991	SNRNP48	93	43.874	ENSLOCG00000004187	snrnp48	71	43.265	Lepisosteus_oculatus
ENSPCAG00000011991	SNRNP48	100	75.746	ENSLAFG00000011152	SNRNP48	79	75.746	Loxodonta_africana
ENSPCAG00000011991	SNRNP48	99	71.161	ENSMFAG00000045216	SNRNP48	95	77.372	Macaca_fascicularis
ENSPCAG00000011991	SNRNP48	99	71.161	ENSMMUG00000014785	SNRNP48	79	71.161	Macaca_mulatta
ENSPCAG00000011991	SNRNP48	99	70.787	ENSMNEG00000042269	SNRNP48	79	70.787	Macaca_nemestrina
ENSPCAG00000011991	SNRNP48	99	71.161	ENSMLEG00000034004	SNRNP48	95	77.372	Mandrillus_leucophaeus
ENSPCAG00000011991	SNRNP48	98	35.821	ENSMAMG00000018673	snrnp48	63	35.573	Mastacembelus_armatus
ENSPCAG00000011991	SNRNP48	75	53.960	ENSMGAG00000006037	SNRNP48	68	53.960	Meleagris_gallopavo
ENSPCAG00000011991	SNRNP48	99	69.663	ENSMAUG00000011944	Snrnp48	75	78.571	Mesocricetus_auratus
ENSPCAG00000011991	SNRNP48	100	71.269	ENSMICG00000012497	SNRNP48	79	71.269	Microcebus_murinus
ENSPCAG00000011991	SNRNP48	99	68.914	ENSMOCG00000015555	Snrnp48	79	68.914	Microtus_ochrogaster
ENSPCAG00000011991	SNRNP48	97	59.160	ENSMODG00000009996	SNRNP48	72	57.895	Monodelphis_domestica
ENSPCAG00000011991	SNRNP48	94	37.984	ENSMALG00000005725	snrnp48	69	36.992	Monopterus_albus
ENSPCAG00000011991	SNRNP48	99	68.539	MGP_CAROLIEiJ_G0018441	Snrnp48	74	78.571	Mus_caroli
ENSPCAG00000011991	SNRNP48	99	68.539	ENSMUSG00000021431	Snrnp48	74	82.143	Mus_musculus
ENSPCAG00000011991	SNRNP48	99	68.539	MGP_PahariEiJ_G0019509	Snrnp48	79	68.539	Mus_pahari
ENSPCAG00000011991	SNRNP48	99	68.165	MGP_SPRETEiJ_G0019321	Snrnp48	74	82.143	Mus_spretus
ENSPCAG00000011991	SNRNP48	99	68.539	ENSNGAG00000004849	Snrnp48	74	82.143	Nannospalax_galili
ENSPCAG00000011991	SNRNP48	94	37.891	ENSNBRG00000012127	snrnp48	71	37.109	Neolamprologus_brichardi
ENSPCAG00000011991	SNRNP48	99	71.536	ENSNLEG00000011667	SNRNP48	79	71.536	Nomascus_leucogenys
ENSPCAG00000011991	SNRNP48	98	67.300	ENSOPRG00000015471	SNRNP48	77	67.200	Ochotona_princeps
ENSPCAG00000011991	SNRNP48	50	69.595	ENSODEG00000005816	-	95	68.243	Octodon_degus
ENSPCAG00000011991	SNRNP48	94	38.281	ENSONIG00000001520	snrnp48	71	37.500	Oreochromis_niloticus
ENSPCAG00000011991	SNRNP48	72	58.173	ENSOANG00000019888	-	94	58.974	Ornithorhynchus_anatinus
ENSPCAG00000011991	SNRNP48	93	71.486	ENSOCUG00000005168	SNRNP48	86	72.519	Oryctolagus_cuniculus
ENSPCAG00000011991	SNRNP48	93	38.645	ENSORLG00000015654	snrnp48	69	38.776	Oryzias_latipes
ENSPCAG00000011991	SNRNP48	93	37.849	ENSORLG00020015976	snrnp48	59	37.959	Oryzias_latipes_hni
ENSPCAG00000011991	SNRNP48	93	39.044	ENSORLG00015022379	snrnp48	59	39.184	Oryzias_latipes_hsok
ENSPCAG00000011991	SNRNP48	93	37.052	ENSOMEG00000022007	snrnp48	70	37.551	Oryzias_melastigma
ENSPCAG00000011991	SNRNP48	97	69.615	ENSOGAG00000005275	SNRNP48	75	69.355	Otolemur_garnettii
ENSPCAG00000011991	SNRNP48	80	69.302	ENSOARG00000017319	SNRNP48	74	69.194	Ovis_aries
ENSPCAG00000011991	SNRNP48	99	71.536	ENSPPAG00000032873	SNRNP48	79	71.536	Pan_paniscus
ENSPCAG00000011991	SNRNP48	99	69.663	ENSPPRG00000004283	SNRNP48	79	69.663	Panthera_pardus
ENSPCAG00000011991	SNRNP48	80	67.442	ENSPTIG00000013502	SNRNP48	74	67.299	Panthera_tigris_altaica
ENSPCAG00000011991	SNRNP48	99	71.536	ENSPTRG00000017703	SNRNP48	79	71.536	Pan_troglodytes
ENSPCAG00000011991	SNRNP48	99	71.161	ENSPANG00000000771	SNRNP48	98	75.177	Papio_anubis
ENSPCAG00000011991	SNRNP48	90	38.934	ENSPKIG00000013703	snrnp48	52	39.357	Paramormyrops_kingsleyae
ENSPCAG00000011991	SNRNP48	78	54.286	ENSPSIG00000002213	SNRNP48	64	55.392	Pelodiscus_sinensis
ENSPCAG00000011991	SNRNP48	91	36.400	ENSPMGG00000008120	snrnp48	85	36.327	Periophthalmus_magnuspinnatus
ENSPCAG00000011991	SNRNP48	99	70.412	ENSPEMG00000008872	Snrnp48	74	80.000	Peromyscus_maniculatus_bairdii
ENSPCAG00000011991	SNRNP48	97	39.464	ENSPFOG00000003578	snrnp48	70	38.956	Poecilia_formosa
ENSPCAG00000011991	SNRNP48	77	42.308	ENSPLAG00000002290	snrnp48	64	43.229	Poecilia_latipinna
ENSPCAG00000011991	SNRNP48	97	38.697	ENSPMEG00000018033	snrnp48	70	38.153	Poecilia_mexicana
ENSPCAG00000011991	SNRNP48	95	38.672	ENSPREG00000018541	snrnp48	70	38.554	Poecilia_reticulata
ENSPCAG00000011991	SNRNP48	99	69.663	ENSPPYG00000016209	SNRNP48	79	69.663	Pongo_abelii
ENSPCAG00000011991	SNRNP48	99	70.189	ENSPVAG00000002854	SNRNP48	78	70.189	Pteropus_vampyrus
ENSPCAG00000011991	SNRNP48	94	37.891	ENSPNYG00000015399	snrnp48	78	38.095	Pundamilia_nyererei
ENSPCAG00000011991	SNRNP48	99	68.914	ENSRNOG00000013756	Snrnp48	79	68.914	Rattus_norvegicus
ENSPCAG00000011991	SNRNP48	99	71.161	ENSRBIG00000043856	SNRNP48	98	75.177	Rhinopithecus_bieti
ENSPCAG00000011991	SNRNP48	99	70.787	ENSRROG00000043229	SNRNP48	79	70.787	Rhinopithecus_roxellana
ENSPCAG00000011991	SNRNP48	99	71.161	ENSSBOG00000019486	SNRNP48	79	71.161	Saimiri_boliviensis_boliviensis
ENSPCAG00000011991	SNRNP48	99	58.427	ENSSHAG00000014483	SNRNP48	77	58.052	Sarcophilus_harrisii
ENSPCAG00000011991	SNRNP48	92	39.357	ENSSFOG00015006610	snrnp48	57	39.506	Scleropages_formosus
ENSPCAG00000011991	SNRNP48	96	38.550	ENSSDUG00000014953	snrnp48	71	37.450	Seriola_dumerili
ENSPCAG00000011991	SNRNP48	97	37.269	ENSSLDG00000005989	snrnp48	71	37.052	Seriola_lalandi_dorsalis
ENSPCAG00000011991	SNRNP48	80	52.558	ENSSPUG00000006257	SNRNP48	58	53.202	Sphenodon_punctatus
ENSPCAG00000011991	SNRNP48	90	36.475	ENSSPAG00000006454	snrnp48	71	35.714	Stegastes_partitus
ENSPCAG00000011991	SNRNP48	77	53.398	ENSTGUG00000007575	SNRNP48	65	53.202	Taeniopygia_guttata
ENSPCAG00000011991	SNRNP48	90	38.525	ENSTRUG00000007031	snrnp48	72	39.200	Takifugu_rubripes
ENSPCAG00000011991	SNRNP48	90	36.290	ENSTNIG00000012977	-	71	36.327	Tetraodon_nigroviridis
ENSPCAG00000011991	SNRNP48	99	70.677	ENSTBEG00000015620	SNRNP48	79	70.677	Tupaia_belangeri
ENSPCAG00000011991	SNRNP48	99	70.189	ENSTTRG00000016715	SNRNP48	78	70.189	Tursiops_truncatus
ENSPCAG00000011991	SNRNP48	99	71.161	ENSUAMG00000003690	SNRNP48	73	85.714	Ursus_americanus
ENSPCAG00000011991	SNRNP48	80	66.822	ENSVPAG00000003557	SNRNP48	73	66.190	Vicugna_pacos
ENSPCAG00000011991	SNRNP48	98	69.847	ENSVVUG00000004996	SNRNP48	79	67.164	Vulpes_vulpes
ENSPCAG00000011991	SNRNP48	92	43.145	ENSXETG00000020447	snrnp48	70	42.149	Xenopus_tropicalis
ENSPCAG00000011991	SNRNP48	77	42.308	ENSXCOG00000004478	snrnp48	57	41.837	Xiphophorus_couchianus
ENSPCAG00000011991	SNRNP48	97	39.464	ENSXMAG00000013595	snrnp48	70	38.956	Xiphophorus_maculatus