EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000012098 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 10623 bases
Position: chrGeneScaffold_5980:113708-124330
Accession: 20900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011271	Gcd10p	PF04189.13	2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012068	TRMT6-201	1494	-	ENSPCAP00000011271	497 (aa)	-	UPI00018B032E

Gene Model

Click here to download ENSPCAG00000012098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012098	TRMT6	100	89.336	ENSG00000089195	TRMT6	100	89.336	Homo_sapiens
ENSPCAG00000012098	TRMT6	96	60.334	ENSAPOG00000008036	trmt6	98	58.884	Acanthochromis_polyacanthus
ENSPCAG00000012098	TRMT6	100	90.342	ENSAMEG00000010635	TRMT6	100	90.342	Ailuropoda_melanoleuca
ENSPCAG00000012098	TRMT6	95	56.421	ENSACIG00000004608	trmt6	96	55.136	Amphilophus_citrinellus
ENSPCAG00000012098	TRMT6	97	57.380	ENSAOCG00000024322	trmt6	98	55.301	Amphiprion_ocellaris
ENSPCAG00000012098	TRMT6	97	59.175	ENSAPEG00000017334	trmt6	98	58.178	Amphiprion_percula
ENSPCAG00000012098	TRMT6	92	58.297	ENSATEG00000018498	trmt6	97	57.860	Anabas_testudineus
ENSPCAG00000012098	TRMT6	91	75.877	ENSAPLG00000007761	TRMT6	99	75.877	Anas_platyrhynchos
ENSPCAG00000012098	TRMT6	96	69.247	ENSACAG00000000575	TRMT6	98	69.247	Anolis_carolinensis
ENSPCAG00000012098	TRMT6	100	88.934	ENSANAG00000021260	TRMT6	100	88.934	Aotus_nancymaae
ENSPCAG00000012098	TRMT6	95	55.230	ENSACLG00000026034	trmt6	96	55.230	Astatotilapia_calliptera
ENSPCAG00000012098	TRMT6	95	57.773	ENSAMXG00000017116	trmt6	95	57.684	Astyanax_mexicanus
ENSPCAG00000012098	TRMT6	100	89.537	ENSBTAG00000001314	TRMT6	100	89.537	Bos_taurus
ENSPCAG00000012098	TRMT6	100	88.934	ENSCJAG00000021296	TRMT6	100	88.934	Callithrix_jacchus
ENSPCAG00000012098	TRMT6	100	89.738	ENSCAFG00000005969	TRMT6	100	89.738	Canis_familiaris
ENSPCAG00000012098	TRMT6	100	89.940	ENSCAFG00020000777	TRMT6	100	89.940	Canis_lupus_dingo
ENSPCAG00000012098	TRMT6	100	89.537	ENSCHIG00000010338	TRMT6	100	89.537	Capra_hircus
ENSPCAG00000012098	TRMT6	100	89.135	ENSTSYG00000004286	TRMT6	100	89.135	Carlito_syrichta
ENSPCAG00000012098	TRMT6	83	84.783	ENSCAPG00000015467	TRMT6	93	84.783	Cavia_aperea
ENSPCAG00000012098	TRMT6	100	84.708	ENSCPOG00000013809	TRMT6	100	84.708	Cavia_porcellus
ENSPCAG00000012098	TRMT6	100	88.934	ENSCCAG00000026939	TRMT6	100	88.934	Cebus_capucinus
ENSPCAG00000012098	TRMT6	100	89.336	ENSCATG00000041111	TRMT6	100	89.336	Cercocebus_atys
ENSPCAG00000012098	TRMT6	99	87.169	ENSCLAG00000013978	TRMT6	99	87.169	Chinchilla_lanigera
ENSPCAG00000012098	TRMT6	100	89.336	ENSCSAG00000013461	TRMT6	100	89.336	Chlorocebus_sabaeus
ENSPCAG00000012098	TRMT6	84	79.245	ENSCHOG00000012537	TRMT6	83	79.245	Choloepus_hoffmanni
ENSPCAG00000012098	TRMT6	97	75.359	ENSCPBG00000023406	TRMT6	99	75.359	Chrysemys_picta_bellii
ENSPCAG00000012098	TRMT6	90	34.632	ENSCING00000002472	-	96	33.259	Ciona_intestinalis
ENSPCAG00000012098	TRMT6	87	39.955	ENSCSAVG00000001680	-	94	37.674	Ciona_savignyi
ENSPCAG00000012098	TRMT6	100	89.135	ENSCANG00000002381	TRMT6	100	89.135	Colobus_angolensis_palliatus
ENSPCAG00000012098	TRMT6	100	84.105	ENSCGRG00001003385	Trmt6	100	84.105	Cricetulus_griseus_chok1gshd
ENSPCAG00000012098	TRMT6	100	84.105	ENSCGRG00000006540	Trmt6	100	84.105	Cricetulus_griseus_crigri
ENSPCAG00000012098	TRMT6	96	58.664	ENSCSEG00000002228	trmt6	98	58.058	Cynoglossus_semilaevis
ENSPCAG00000012098	TRMT6	97	56.879	ENSCVAG00000000341	trmt6	98	56.879	Cyprinodon_variegatus
ENSPCAG00000012098	TRMT6	97	58.230	ENSDARG00000042344	trmt6	97	55.258	Danio_rerio
ENSPCAG00000012098	TRMT6	100	81.944	ENSDNOG00000012785	TRMT6	100	81.944	Dasypus_novemcinctus
ENSPCAG00000012098	TRMT6	100	85.111	ENSDORG00000006458	Trmt6	99	85.111	Dipodomys_ordii
ENSPCAG00000012098	TRMT6	60	94.697	ENSETEG00000003490	-	60	94.697	Echinops_telfairi
ENSPCAG00000012098	TRMT6	66	52.584	ENSETEG00000017282	-	96	52.584	Echinops_telfairi
ENSPCAG00000012098	TRMT6	97	91.684	ENSEASG00005001411	TRMT6	99	91.242	Equus_asinus_asinus
ENSPCAG00000012098	TRMT6	97	91.476	ENSECAG00000023914	TRMT6	100	90.543	Equus_caballus
ENSPCAG00000012098	TRMT6	99	87.298	ENSEEUG00000006635	TRMT6	99	87.298	Erinaceus_europaeus
ENSPCAG00000012098	TRMT6	96	58.628	ENSELUG00000013378	trmt6	79	59.031	Esox_lucius
ENSPCAG00000012098	TRMT6	100	90.946	ENSFCAG00000003102	TRMT6	100	90.946	Felis_catus
ENSPCAG00000012098	TRMT6	90	74.558	ENSFALG00000013575	TRMT6	97	73.894	Ficedula_albicollis
ENSPCAG00000012098	TRMT6	100	86.117	ENSFDAG00000015117	TRMT6	100	86.117	Fukomys_damarensis
ENSPCAG00000012098	TRMT6	96	57.676	ENSFHEG00000019957	trmt6	97	57.676	Fundulus_heteroclitus
ENSPCAG00000012098	TRMT6	81	63.780	ENSGMOG00000011059	trmt6	93	63.780	Gadus_morhua
ENSPCAG00000012098	TRMT6	95	74.160	ENSGALG00000009169	TRMT6	97	74.160	Gallus_gallus
ENSPCAG00000012098	TRMT6	97	57.438	ENSGAFG00000008618	trmt6	98	56.289	Gambusia_affinis
ENSPCAG00000012098	TRMT6	96	55.324	ENSGACG00000012471	trmt6	97	55.717	Gasterosteus_aculeatus
ENSPCAG00000012098	TRMT6	97	74.949	ENSGAGG00000008464	TRMT6	99	75.439	Gopherus_agassizii
ENSPCAG00000012098	TRMT6	100	89.336	ENSGGOG00000008597	TRMT6	100	89.336	Gorilla_gorilla
ENSPCAG00000012098	TRMT6	95	55.230	ENSHBUG00000016631	trmt6	97	55.230	Haplochromis_burtoni
ENSPCAG00000012098	TRMT6	100	86.922	ENSHGLG00000015405	TRMT6	100	86.922	Heterocephalus_glaber_female
ENSPCAG00000012098	TRMT6	100	86.922	ENSHGLG00100004120	TRMT6	100	86.922	Heterocephalus_glaber_male
ENSPCAG00000012098	TRMT6	96	57.380	ENSHCOG00000000118	trmt6	98	57.764	Hippocampus_comes
ENSPCAG00000012098	TRMT6	95	59.664	ENSIPUG00000019365	trmt6	97	58.613	Ictalurus_punctatus
ENSPCAG00000012098	TRMT6	100	85.513	ENSSTOG00000006863	TRMT6	100	85.513	Ictidomys_tridecemlineatus
ENSPCAG00000012098	TRMT6	99	82.424	ENSJJAG00000007315	Trmt6	99	82.424	Jaculus_jaculus
ENSPCAG00000012098	TRMT6	95	58.038	ENSKMAG00000001295	trmt6	97	57.411	Kryptolebias_marmoratus
ENSPCAG00000012098	TRMT6	96	55.532	ENSLBEG00000025654	trmt6	98	55.532	Labrus_bergylta
ENSPCAG00000012098	TRMT6	96	69.772	ENSLACG00000016478	TRMT6	96	69.772	Latimeria_chalumnae
ENSPCAG00000012098	TRMT6	96	63.883	ENSLOCG00000016451	trmt6	97	63.883	Lepisosteus_oculatus
ENSPCAG00000012098	TRMT6	99	93.712	ENSLAFG00000032216	TRMT6	98	93.712	Loxodonta_africana
ENSPCAG00000012098	TRMT6	100	89.135	ENSMFAG00000044360	TRMT6	100	89.135	Macaca_fascicularis
ENSPCAG00000012098	TRMT6	100	89.135	ENSMMUG00000013728	TRMT6	100	89.135	Macaca_mulatta
ENSPCAG00000012098	TRMT6	100	88.934	ENSMNEG00000041831	TRMT6	100	88.934	Macaca_nemestrina
ENSPCAG00000012098	TRMT6	100	89.537	ENSMLEG00000040762	TRMT6	100	89.537	Mandrillus_leucophaeus
ENSPCAG00000012098	TRMT6	96	58.506	ENSMAMG00000012101	trmt6	98	58.506	Mastacembelus_armatus
ENSPCAG00000012098	TRMT6	95	55.230	ENSMZEG00005010771	trmt6	96	55.230	Maylandia_zebra
ENSPCAG00000012098	TRMT6	95	74.160	ENSMGAG00000007678	TRMT6	97	74.160	Meleagris_gallopavo
ENSPCAG00000012098	TRMT6	100	83.501	ENSMAUG00000008719	Trmt6	100	83.501	Mesocricetus_auratus
ENSPCAG00000012098	TRMT6	97	90.852	ENSMICG00000011626	TRMT6	99	89.940	Microcebus_murinus
ENSPCAG00000012098	TRMT6	97	84.647	ENSMOCG00000022320	Trmt6	100	83.702	Microtus_ochrogaster
ENSPCAG00000012098	TRMT6	96	52.917	ENSMMOG00000004412	trmt6	97	52.708	Mola_mola
ENSPCAG00000012098	TRMT6	98	78.937	ENSMODG00000003784	TRMT6	98	79.098	Monodelphis_domestica
ENSPCAG00000012098	TRMT6	96	53.830	ENSMALG00000018140	trmt6	97	53.830	Monopterus_albus
ENSPCAG00000012098	TRMT6	99	82.688	MGP_CAROLIEiJ_G0024344	Trmt6	99	82.688	Mus_caroli
ENSPCAG00000012098	TRMT6	99	83.096	ENSMUSG00000037376	Trmt6	99	83.096	Mus_musculus
ENSPCAG00000012098	TRMT6	99	83.707	MGP_PahariEiJ_G0025789	Trmt6	99	83.707	Mus_pahari
ENSPCAG00000012098	TRMT6	99	82.892	MGP_SPRETEiJ_G0025264	Trmt6	99	82.892	Mus_spretus
ENSPCAG00000012098	TRMT6	87	90.092	ENSMPUG00000006317	TRMT6	93	90.092	Mustela_putorius_furo
ENSPCAG00000012098	TRMT6	97	90.437	ENSMLUG00000006491	TRMT6	100	89.940	Myotis_lucifugus
ENSPCAG00000012098	TRMT6	98	82.485	ENSNGAG00000015251	Trmt6	98	82.485	Nannospalax_galili
ENSPCAG00000012098	TRMT6	95	53.249	ENSNBRG00000020261	trmt6	96	52.632	Neolamprologus_brichardi
ENSPCAG00000012098	TRMT6	100	89.537	ENSNLEG00000013957	TRMT6	100	89.537	Nomascus_leucogenys
ENSPCAG00000012098	TRMT6	85	81.710	ENSMEUG00000009179	TRMT6	100	81.710	Notamacropus_eugenii
ENSPCAG00000012098	TRMT6	100	85.341	ENSOPRG00000008564	TRMT6	100	85.341	Ochotona_princeps
ENSPCAG00000012098	TRMT6	100	86.922	ENSODEG00000005657	TRMT6	100	86.922	Octodon_degus
ENSPCAG00000012098	TRMT6	95	56.367	ENSONIG00000000968	trmt6	97	56.159	Oreochromis_niloticus
ENSPCAG00000012098	TRMT6	91	78.901	ENSOANG00000008403	-	99	78.901	Ornithorhynchus_anatinus
ENSPCAG00000012098	TRMT6	100	88.531	ENSOCUG00000014669	TRMT6	100	88.531	Oryctolagus_cuniculus
ENSPCAG00000012098	TRMT6	96	55.833	ENSORLG00000009862	trmt6	97	55.833	Oryzias_latipes
ENSPCAG00000012098	TRMT6	96	55.417	ENSORLG00020001466	trmt6	97	55.417	Oryzias_latipes_hni
ENSPCAG00000012098	TRMT6	96	55.925	ENSORLG00015015552	trmt6	97	56.133	Oryzias_latipes_hsok
ENSPCAG00000012098	TRMT6	95	53.766	ENSOMEG00000019874	trmt6	96	53.766	Oryzias_melastigma
ENSPCAG00000012098	TRMT6	97	88.797	ENSOGAG00000012950	TRMT6	99	87.751	Otolemur_garnettii
ENSPCAG00000012098	TRMT6	100	89.336	ENSOARG00000017993	TRMT6	100	89.336	Ovis_aries
ENSPCAG00000012098	TRMT6	100	88.554	ENSPPAG00000036809	TRMT6	100	88.554	Pan_paniscus
ENSPCAG00000012098	TRMT6	100	90.946	ENSPPRG00000000424	TRMT6	100	90.946	Panthera_pardus
ENSPCAG00000012098	TRMT6	100	90.946	ENSPTIG00000010629	TRMT6	100	90.946	Panthera_tigris_altaica
ENSPCAG00000012098	TRMT6	100	89.336	ENSPTRG00000013231	TRMT6	100	89.336	Pan_troglodytes
ENSPCAG00000012098	TRMT6	100	89.537	ENSPANG00000009284	TRMT6	100	89.537	Papio_anubis
ENSPCAG00000012098	TRMT6	96	60.460	ENSPKIG00000003441	trmt6	97	59.420	Paramormyrops_kingsleyae
ENSPCAG00000012098	TRMT6	98	73.673	ENSPSIG00000017048	TRMT6	98	73.428	Pelodiscus_sinensis
ENSPCAG00000012098	TRMT6	86	57.309	ENSPMGG00000021074	trmt6	89	57.309	Periophthalmus_magnuspinnatus
ENSPCAG00000012098	TRMT6	97	84.232	ENSPEMG00000023268	Trmt6	100	82.766	Peromyscus_maniculatus_bairdii
ENSPCAG00000012098	TRMT6	98	80.328	ENSPCIG00000001546	TRMT6	95	80.328	Phascolarctos_cinereus
ENSPCAG00000012098	TRMT6	97	57.055	ENSPFOG00000003037	trmt6	98	57.055	Poecilia_formosa
ENSPCAG00000012098	TRMT6	97	57.113	ENSPLAG00000005143	trmt6	98	56.701	Poecilia_latipinna
ENSPCAG00000012098	TRMT6	97	57.113	ENSPMEG00000014875	trmt6	98	56.701	Poecilia_mexicana
ENSPCAG00000012098	TRMT6	97	53.638	ENSPREG00000016227	trmt6	97	53.430	Poecilia_reticulata
ENSPCAG00000012098	TRMT6	100	89.135	ENSPPYG00000010691	TRMT6	100	89.135	Pongo_abelii
ENSPCAG00000012098	TRMT6	97	90.249	ENSPCOG00000020723	TRMT6	100	89.357	Propithecus_coquereli
ENSPCAG00000012098	TRMT6	99	86.089	ENSPVAG00000007539	TRMT6	99	86.089	Pteropus_vampyrus
ENSPCAG00000012098	TRMT6	95	55.603	ENSPNYG00000000918	trmt6	97	54.167	Pundamilia_nyererei
ENSPCAG00000012098	TRMT6	97	59.175	ENSPNAG00000019279	trmt6	97	59.175	Pygocentrus_nattereri
ENSPCAG00000012098	TRMT6	99	82.485	ENSRNOG00000021270	Trmt6	99	82.485	Rattus_norvegicus
ENSPCAG00000012098	TRMT6	100	88.129	ENSRBIG00000031132	TRMT6	100	88.129	Rhinopithecus_bieti
ENSPCAG00000012098	TRMT6	100	89.336	ENSRROG00000045329	TRMT6	100	89.336	Rhinopithecus_roxellana
ENSPCAG00000012098	TRMT6	100	88.531	ENSSBOG00000033602	-	100	88.531	Saimiri_boliviensis_boliviensis
ENSPCAG00000012098	TRMT6	85	88.204	ENSSBOG00000019803	-	99	88.204	Saimiri_boliviensis_boliviensis
ENSPCAG00000012098	TRMT6	98	79.261	ENSSHAG00000010754	TRMT6	96	79.261	Sarcophilus_harrisii
ENSPCAG00000012098	TRMT6	96	62.264	ENSSFOG00015008429	trmt6	97	58.471	Scleropages_formosus
ENSPCAG00000012098	TRMT6	98	56.212	ENSSMAG00000005352	trmt6	99	56.212	Scophthalmus_maximus
ENSPCAG00000012098	TRMT6	96	59.298	ENSSDUG00000008294	trmt6	98	58.557	Seriola_dumerili
ENSPCAG00000012098	TRMT6	96	59.917	ENSSLDG00000002180	trmt6	98	59.175	Seriola_lalandi_dorsalis
ENSPCAG00000012098	TRMT6	100	82.897	ENSSARG00000005487	TRMT6	100	82.897	Sorex_araneus
ENSPCAG00000012098	TRMT6	96	57.959	ENSSPAG00000011628	trmt6	98	58.385	Stegastes_partitus
ENSPCAG00000012098	TRMT6	100	89.135	ENSSSCG00000007046	TRMT6	72	89.135	Sus_scrofa
ENSPCAG00000012098	TRMT6	96	74.167	ENSTGUG00000002195	TRMT6	98	75.625	Taeniopygia_guttata
ENSPCAG00000012098	TRMT6	95	54.219	ENSTRUG00000007153	trmt6	96	54.219	Takifugu_rubripes
ENSPCAG00000012098	TRMT6	95	57.173	ENSTNIG00000010726	TRMT6	97	57.173	Tetraodon_nigroviridis
ENSPCAG00000012098	TRMT6	76	88.387	ENSTBEG00000016317	TRMT6	73	87.943	Tupaia_belangeri
ENSPCAG00000012098	TRMT6	100	90.543	ENSTTRG00000012889	TRMT6	100	90.543	Tursiops_truncatus
ENSPCAG00000012098	TRMT6	100	89.537	ENSUAMG00000008674	TRMT6	100	89.537	Ursus_americanus
ENSPCAG00000012098	TRMT6	100	90.342	ENSUMAG00000004999	TRMT6	100	90.342	Ursus_maritimus
ENSPCAG00000012098	TRMT6	100	88.645	ENSVPAG00000002371	TRMT6	100	88.645	Vicugna_pacos
ENSPCAG00000012098	TRMT6	100	90.141	ENSVVUG00000023370	TRMT6	100	90.141	Vulpes_vulpes
ENSPCAG00000012098	TRMT6	96	66.392	ENSXETG00000004501	trmt6	98	66.392	Xenopus_tropicalis
ENSPCAG00000012098	TRMT6	97	52.391	ENSXCOG00000007761	trmt6	98	51.975	Xiphophorus_couchianus
ENSPCAG00000012098	TRMT6	97	56.701	ENSXMAG00000008592	trmt6	98	56.289	Xiphophorus_maculatus