EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000012171 (Gene tree)
Gene ID: -
Gene Symbol: PPARGC1B
Alias: PERC|PGC1B
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 120102 bases
Position: chrGeneScaffold_4688:17507-137608
Accession: 30022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011422	RRM_1	PF00076.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012231	PPARGC1B-201	3033	-	ENSPCAP00000011422	1010 (aa)	-	UPI00018B074B

Gene Model

Click here to download ENSPCAG00000012171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSG00000155846	PPARGC1B	72	82.171	Homo_sapiens
ENSPCAG00000012171	PPARGC1B	80	84.932	ENSAMEG00000005287	PPARGC1B	80	83.562	Ailuropoda_melanoleuca
ENSPCAG00000012171	PPARGC1B	65	56.000	ENSAPLG00000009977	PPARGC1B	70	54.280	Anas_platyrhynchos
ENSPCAG00000012171	PPARGC1B	79	51.562	ENSACAG00000015737	PPARGC1B	70	51.272	Anolis_carolinensis
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSANAG00000021830	PPARGC1B	72	81.625	Aotus_nancymaae
ENSPCAG00000012171	PPARGC1B	79	82.549	ENSBTAG00000012943	PPARGC1B	72	82.157	Bos_taurus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSCJAG00000021113	PPARGC1B	71	79.400	Callithrix_jacchus
ENSPCAG00000012171	PPARGC1B	80	86.471	ENSCAFG00000018275	PPARGC1B	80	85.882	Canis_familiaris
ENSPCAG00000012171	PPARGC1B	80	86.471	ENSCAFG00020023524	PPARGC1B	79	85.882	Canis_lupus_dingo
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSCHIG00000004409	PPARGC1B	72	81.641	Capra_hircus
ENSPCAG00000012171	PPARGC1B	71	73.438	ENSTSYG00000034354	PPARGC1B	72	71.875	Carlito_syrichta
ENSPCAG00000012171	PPARGC1B	71	78.210	ENSCAPG00000008859	PPARGC1B	71	78.599	Cavia_aperea
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSCPOG00000001958	PPARGC1B	71	78.599	Cavia_porcellus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSCCAG00000026909	PPARGC1B	72	81.942	Cebus_capucinus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSCATG00000030402	PPARGC1B	72	82.558	Cercocebus_atys
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSCLAG00000015452	PPARGC1B	73	77.388	Chinchilla_lanigera
ENSPCAG00000012171	PPARGC1B	71	82.524	ENSCSAG00000011792	PPARGC1B	73	82.136	Chlorocebus_sabaeus
ENSPCAG00000012171	PPARGC1B	79	55.424	ENSCPBG00000007891	PPARGC1B	69	54.314	Chrysemys_picta_bellii
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSCANG00000037487	PPARGC1B	72	81.081	Colobus_angolensis_palliatus
ENSPCAG00000012171	PPARGC1B	71	76.311	ENSCGRG00001017949	Ppargc1b	71	76.699	Cricetulus_griseus_chok1gshd
ENSPCAG00000012171	PPARGC1B	71	75.728	ENSCGRG00000008387	Ppargc1b	73	76.117	Cricetulus_griseus_crigri
ENSPCAG00000012171	PPARGC1B	63	85.404	ENSDNOG00000005985	PPARGC1B	68	72.768	Dasypus_novemcinctus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSDORG00000012605	Ppargc1b	70	78.101	Dipodomys_ordii
ENSPCAG00000012171	PPARGC1B	80	84.086	ENSEASG00005002826	PPARGC1B	78	83.497	Equus_asinus_asinus
ENSPCAG00000012171	PPARGC1B	80	84.283	ENSECAG00000019769	PPARGC1B	66	83.694	Equus_caballus
ENSPCAG00000012171	PPARGC1B	50	80.000	ENSEEUG00000014903	PPARGC1B	55	80.000	Erinaceus_europaeus
ENSPCAG00000012171	PPARGC1B	64	31.839	ENSELUG00000014929	ppargc1b	53	43.307	Esox_lucius
ENSPCAG00000012171	PPARGC1B	66	57.549	ENSFALG00000008858	PPARGC1B	70	57.267	Ficedula_albicollis
ENSPCAG00000012171	PPARGC1B	70	73.108	ENSFDAG00000008719	PPARGC1B	71	74.104	Fukomys_damarensis
ENSPCAG00000012171	PPARGC1B	76	56.584	ENSGAGG00000012870	PPARGC1B	67	56.033	Gopherus_agassizii
ENSPCAG00000012171	PPARGC1B	71	80.039	ENSGGOG00000009505	PPARGC1B	74	81.783	Gorilla_gorilla
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSHGLG00000005967	PPARGC1B	72	77.282	Heterocephalus_glaber_female
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSHGLG00100010588	PPARGC1B	70	75.340	Heterocephalus_glaber_male
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSSTOG00000024758	PPARGC1B	72	82.524	Ictidomys_tridecemlineatus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSJJAG00000018633	Ppargc1b	72	77.326	Jaculus_jaculus
ENSPCAG00000012171	PPARGC1B	71	40.762	ENSLACG00000011232	PPARGC1B	74	40.541	Latimeria_chalumnae
ENSPCAG00000012171	PPARGC1B	50	43.609	ENSLOCG00000012195	ppargc1b	55	43.609	Lepisosteus_oculatus
ENSPCAG00000012171	PPARGC1B	71	89.258	ENSLAFG00000012339	PPARGC1B	74	89.258	Loxodonta_africana
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSMFAG00000042269	PPARGC1B	72	82.558	Macaca_fascicularis
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSMMUG00000004749	PPARGC1B	72	82.558	Macaca_mulatta
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSMNEG00000034121	PPARGC1B	72	82.558	Macaca_nemestrina
ENSPCAG00000012171	PPARGC1B	71	82.752	ENSMLEG00000040973	PPARGC1B	74	82.364	Mandrillus_leucophaeus
ENSPCAG00000012171	PPARGC1B	61	50.096	ENSMGAG00000003134	PPARGC1B	64	50.000	Meleagris_gallopavo
ENSPCAG00000012171	PPARGC1B	71	75.194	ENSMAUG00000014191	Ppargc1b	72	75.194	Mesocricetus_auratus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSMICG00000002702	PPARGC1B	72	82.031	Microcebus_murinus
ENSPCAG00000012171	PPARGC1B	71	76.654	ENSMOCG00000014885	Ppargc1b	71	76.265	Microtus_ochrogaster
ENSPCAG00000012171	PPARGC1B	71	62.795	ENSMODG00000009891	PPARGC1B	72	62.795	Monodelphis_domestica
ENSPCAG00000012171	PPARGC1B	74	84.615	MGP_CAROLIEiJ_G0022323	Ppargc1b	72	75.822	Mus_caroli
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSMUSG00000033871	Ppargc1b	72	75.822	Mus_musculus
ENSPCAG00000012171	PPARGC1B	74	84.615	MGP_PahariEiJ_G0019053	Ppargc1b	72	74.615	Mus_pahari
ENSPCAG00000012171	PPARGC1B	74	84.615	MGP_SPRETEiJ_G0023235	Ppargc1b	72	76.311	Mus_spretus
ENSPCAG00000012171	PPARGC1B	80	85.490	ENSMPUG00000014245	PPARGC1B	80	84.902	Mustela_putorius_furo
ENSPCAG00000012171	PPARGC1B	63	76.047	ENSMLUG00000013169	PPARGC1B	69	75.893	Myotis_lucifugus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSNGAG00000016998	Ppargc1b	72	77.344	Nannospalax_galili
ENSPCAG00000012171	PPARGC1B	71	79.417	ENSNLEG00000010193	PPARGC1B	71	78.641	Nomascus_leucogenys
ENSPCAG00000012171	PPARGC1B	70	74.354	ENSOPRG00000010017	PPARGC1B	72	75.547	Ochotona_princeps
ENSPCAG00000012171	PPARGC1B	73	84.615	ENSODEG00000004901	PPARGC1B	70	77.583	Octodon_degus
ENSPCAG00000012171	PPARGC1B	70	62.698	ENSOANG00000009368	PPARGC1B	72	61.706	Ornithorhynchus_anatinus
ENSPCAG00000012171	PPARGC1B	71	79.532	ENSOCUG00000013833	PPARGC1B	73	78.558	Oryctolagus_cuniculus
ENSPCAG00000012171	PPARGC1B	71	82.171	ENSOGAG00000015983	PPARGC1B	73	80.814	Otolemur_garnettii
ENSPCAG00000012171	PPARGC1B	71	81.165	ENSOARG00000005658	PPARGC1B	72	80.194	Ovis_aries
ENSPCAG00000012171	PPARGC1B	71	81.783	ENSPPAG00000035226	PPARGC1B	74	81.395	Pan_paniscus
ENSPCAG00000012171	PPARGC1B	80	85.575	ENSPPRG00000004608	PPARGC1B	79	84.600	Panthera_pardus
ENSPCAG00000012171	PPARGC1B	71	85.409	ENSPTIG00000007391	PPARGC1B	72	84.436	Panthera_tigris_altaica
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSPTRG00000017403	PPARGC1B	72	81.589	Pan_troglodytes
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSPANG00000009512	PPARGC1B	72	82.558	Papio_anubis
ENSPCAG00000012171	PPARGC1B	70	55.200	ENSPSIG00000008358	PPARGC1B	72	55.268	Pelodiscus_sinensis
ENSPCAG00000012171	PPARGC1B	71	76.402	ENSPEMG00000018822	Ppargc1b	72	75.869	Peromyscus_maniculatus_bairdii
ENSPCAG00000012171	PPARGC1B	69	62.648	ENSPCIG00000020102	PPARGC1B	76	62.648	Phascolarctos_cinereus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSPPYG00000015938	PPARGC1B	72	81.977	Pongo_abelii
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSPCOG00000024059	PPARGC1B	72	83.366	Propithecus_coquereli
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSPVAG00000001308	PPARGC1B	72	84.314	Pteropus_vampyrus
ENSPCAG00000012171	PPARGC1B	74	84.615	ENSRNOG00000017503	Ppargc1b	74	75.534	Rattus_norvegicus
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSRBIG00000036724	PPARGC1B	72	81.625	Rhinopithecus_bieti
ENSPCAG00000012171	PPARGC1B	71	82.205	ENSRROG00000029594	PPARGC1B	72	81.818	Rhinopithecus_roxellana
ENSPCAG00000012171	PPARGC1B	74	88.462	ENSSBOG00000028738	PPARGC1B	72	82.136	Saimiri_boliviensis_boliviensis
ENSPCAG00000012171	PPARGC1B	71	61.886	ENSSHAG00000016400	PPARGC1B	72	61.886	Sarcophilus_harrisii
ENSPCAG00000012171	PPARGC1B	68	56.432	ENSSPUG00000019271	PPARGC1B	71	55.510	Sphenodon_punctatus
ENSPCAG00000012171	PPARGC1B	80	76.413	ENSSSCG00000014437	PPARGC1B	80	76.413	Sus_scrofa
ENSPCAG00000012171	PPARGC1B	71	53.216	ENSTGUG00000000232	PPARGC1B	77	53.216	Taeniopygia_guttata
ENSPCAG00000012171	PPARGC1B	71	83.922	ENSTTRG00000008430	PPARGC1B	73	83.333	Tursiops_truncatus
ENSPCAG00000012171	PPARGC1B	71	85.490	ENSUMAG00000005361	PPARGC1B	72	84.902	Ursus_maritimus
ENSPCAG00000012171	PPARGC1B	80	86.078	ENSVVUG00000014358	PPARGC1B	80	85.490	Vulpes_vulpes
ENSPCAG00000012171	PPARGC1B	66	48.472	ENSXETG00000012711	ppargc1b	71	48.472	Xenopus_tropicalis