EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000012229 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 9029 bases
Position: chrGeneScaffold_1508:1701-10729
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011419	R3H	PF01424.22	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012228	R3HCC1-201	1365	-	ENSPCAP00000011419	454 (aa)	-	UPI00018AFEF2

Gene Model

Click here to download ENSPCAG00000012229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012229	R3HCC1	73	83.871	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSPCAG00000012229	R3HCC1	59	47.692	ENSAPOG00000003616	r3hcc1	60	47.692	Acanthochromis_polyacanthus
ENSPCAG00000012229	R3HCC1	73	83.553	ENSAMEG00000002963	R3HCC1	72	83.553	Ailuropoda_melanoleuca
ENSPCAG00000012229	R3HCC1	61	43.066	ENSACIG00000017144	r3hcc1	84	38.621	Amphilophus_citrinellus
ENSPCAG00000012229	R3HCC1	58	47.761	ENSAOCG00000003945	r3hcc1	64	47.761	Amphiprion_ocellaris
ENSPCAG00000012229	R3HCC1	58	47.761	ENSAPEG00000003613	r3hcc1	73	47.761	Amphiprion_percula
ENSPCAG00000012229	R3HCC1	55	44.444	ENSATEG00000023860	r3hcc1	64	44.286	Anabas_testudineus
ENSPCAG00000012229	R3HCC1	63	64.286	ENSACAG00000016627	R3HCC1	64	64.286	Anolis_carolinensis
ENSPCAG00000012229	R3HCC1	74	84.516	ENSANAG00000036169	R3HCC1	73	84.516	Aotus_nancymaae
ENSPCAG00000012229	R3HCC1	73	84.768	ENSBTAG00000025830	R3HCC1	73	84.768	Bos_taurus
ENSPCAG00000012229	R3HCC1	76	82.581	ENSCJAG00000020118	R3HCC1	71	82.581	Callithrix_jacchus
ENSPCAG00000012229	R3HCC1	73	82.895	ENSCAFG00000009210	R3HCC1	73	82.895	Canis_familiaris
ENSPCAG00000012229	R3HCC1	59	80.645	ENSCAFG00020012870	R3HCC1	63	80.645	Canis_lupus_dingo
ENSPCAG00000012229	R3HCC1	67	85.430	ENSCHIG00000009107	R3HCC1	69	85.430	Capra_hircus
ENSPCAG00000012229	R3HCC1	74	85.161	ENSTSYG00000000511	R3HCC1	60	85.161	Carlito_syrichta
ENSPCAG00000012229	R3HCC1	61	72.932	ENSCAPG00000015813	R3HCC1	64	72.932	Cavia_aperea
ENSPCAG00000012229	R3HCC1	70	82.432	ENSCPOG00000009696	R3HCC1	69	82.432	Cavia_porcellus
ENSPCAG00000012229	R3HCC1	76	85.161	ENSCCAG00000037811	R3HCC1	73	85.161	Cebus_capucinus
ENSPCAG00000012229	R3HCC1	76	83.226	ENSCATG00000032971	R3HCC1	64	92.391	Cercocebus_atys
ENSPCAG00000012229	R3HCC1	72	83.784	ENSCLAG00000015556	R3HCC1	66	83.784	Chinchilla_lanigera
ENSPCAG00000012229	R3HCC1	76	82.581	ENSCSAG00000016250	R3HCC1	72	82.581	Chlorocebus_sabaeus
ENSPCAG00000012229	R3HCC1	70	86.275	ENSCHOG00000000396	R3HCC1	72	86.275	Choloepus_hoffmanni
ENSPCAG00000012229	R3HCC1	76	83.871	ENSCANG00000029441	R3HCC1	73	83.871	Colobus_angolensis_palliatus
ENSPCAG00000012229	R3HCC1	72	80.769	ENSCGRG00001014977	R3hcc1	69	80.769	Cricetulus_griseus_chok1gshd
ENSPCAG00000012229	R3HCC1	72	80.769	ENSCGRG00000004454	R3hcc1	69	80.769	Cricetulus_griseus_crigri
ENSPCAG00000012229	R3HCC1	63	50.000	ENSCSEG00000005748	r3hcc1	72	50.000	Cynoglossus_semilaevis
ENSPCAG00000012229	R3HCC1	56	43.678	ENSCVAG00000002640	r3hcc1	67	43.678	Cyprinodon_variegatus
ENSPCAG00000012229	R3HCC1	63	44.681	ENSDARG00000099593	r3hcc1	72	44.681	Danio_rerio
ENSPCAG00000012229	R3HCC1	74	86.813	ENSDNOG00000007168	R3HCC1	71	86.813	Dasypus_novemcinctus
ENSPCAG00000012229	R3HCC1	72	81.935	ENSDORG00000026365	R3hcc1	71	81.935	Dipodomys_ordii
ENSPCAG00000012229	R3HCC1	73	83.333	ENSETEG00000001147	R3HCC1	74	83.333	Echinops_telfairi
ENSPCAG00000012229	R3HCC1	72	85.526	ENSEASG00005018782	R3HCC1	60	85.526	Equus_asinus_asinus
ENSPCAG00000012229	R3HCC1	72	84.916	ENSECAG00000025013	R3HCC1	73	84.916	Equus_caballus
ENSPCAG00000012229	R3HCC1	72	83.117	ENSEEUG00000011918	R3HCC1	73	83.117	Erinaceus_europaeus
ENSPCAG00000012229	R3HCC1	60	50.000	ENSELUG00000023650	r3hcc1	75	43.478	Esox_lucius
ENSPCAG00000012229	R3HCC1	74	85.526	ENSFCAG00000012395	R3HCC1	74	85.526	Felis_catus
ENSPCAG00000012229	R3HCC1	65	51.592	ENSFALG00000001646	R3HCC1	51	51.592	Ficedula_albicollis
ENSPCAG00000012229	R3HCC1	72	78.065	ENSFDAG00000001572	R3HCC1	72	78.065	Fukomys_damarensis
ENSPCAG00000012229	R3HCC1	61	37.063	ENSGMOG00000017590	-	81	37.063	Gadus_morhua
ENSPCAG00000012229	R3HCC1	68	47.552	ENSGAFG00000008747	-	66	47.552	Gambusia_affinis
ENSPCAG00000012229	R3HCC1	66	46.479	ENSGACG00000008447	r3hcc1	73	46.479	Gasterosteus_aculeatus
ENSPCAG00000012229	R3HCC1	76	83.871	ENSGGOG00000013817	R3HCC1	76	83.871	Gorilla_gorilla
ENSPCAG00000012229	R3HCC1	74	80.000	ENSHGLG00000010517	R3HCC1	72	80.000	Heterocephalus_glaber_female
ENSPCAG00000012229	R3HCC1	74	80.000	ENSHGLG00100006388	R3HCC1	72	80.000	Heterocephalus_glaber_male
ENSPCAG00000012229	R3HCC1	61	48.462	ENSHCOG00000011745	r3hcc1	67	47.794	Hippocampus_comes
ENSPCAG00000012229	R3HCC1	64	47.222	ENSIPUG00000024504	r3hcc1	64	47.222	Ictalurus_punctatus
ENSPCAG00000012229	R3HCC1	73	78.710	ENSSTOG00000027130	R3HCC1	74	78.710	Ictidomys_tridecemlineatus
ENSPCAG00000012229	R3HCC1	70	79.268	ENSJJAG00000013075	R3hcc1	69	79.268	Jaculus_jaculus
ENSPCAG00000012229	R3HCC1	62	45.139	ENSKMAG00000000286	r3hcc1	71	45.139	Kryptolebias_marmoratus
ENSPCAG00000012229	R3HCC1	68	51.049	ENSLACG00000011894	R3HCC1	69	51.049	Latimeria_chalumnae
ENSPCAG00000012229	R3HCC1	68	48.951	ENSLOCG00000015442	r3hcc1	77	48.951	Lepisosteus_oculatus
ENSPCAG00000012229	R3HCC1	76	92.903	ENSLAFG00000016137	R3HCC1	69	92.903	Loxodonta_africana
ENSPCAG00000012229	R3HCC1	76	82.581	ENSMFAG00000032894	R3HCC1	64	92.391	Macaca_fascicularis
ENSPCAG00000012229	R3HCC1	76	83.226	ENSMMUG00000016655	R3HCC1	65	91.262	Macaca_mulatta
ENSPCAG00000012229	R3HCC1	76	83.226	ENSMNEG00000043283	R3HCC1	64	92.391	Macaca_nemestrina
ENSPCAG00000012229	R3HCC1	76	83.226	ENSMLEG00000030147	R3HCC1	64	92.391	Mandrillus_leucophaeus
ENSPCAG00000012229	R3HCC1	56	47.727	ENSMAMG00000018146	r3hcc1	63	47.727	Mastacembelus_armatus
ENSPCAG00000012229	R3HCC1	67	62.581	ENSMGAG00000001356	R3HCC1	63	62.581	Meleagris_gallopavo
ENSPCAG00000012229	R3HCC1	72	81.410	ENSMAUG00000016096	R3hcc1	70	81.410	Mesocricetus_auratus
ENSPCAG00000012229	R3HCC1	76	85.714	ENSMICG00000011146	R3HCC1	74	85.714	Microcebus_murinus
ENSPCAG00000012229	R3HCC1	72	82.692	ENSMOCG00000018508	R3hcc1	69	82.692	Microtus_ochrogaster
ENSPCAG00000012229	R3HCC1	67	74.830	ENSMODG00000016809	-	74	74.830	Monodelphis_domestica
ENSPCAG00000012229	R3HCC1	56	47.727	ENSMALG00000000731	r3hcc1	62	47.727	Monopterus_albus
ENSPCAG00000012229	R3HCC1	72	77.564	MGP_CAROLIEiJ_G0019467	R3hcc1	68	77.564	Mus_caroli
ENSPCAG00000012229	R3HCC1	72	77.528	ENSMUSG00000034194	R3hcc1	68	77.528	Mus_musculus
ENSPCAG00000012229	R3HCC1	72	76.282	MGP_PahariEiJ_G0030484	R3hcc1	67	76.282	Mus_pahari
ENSPCAG00000012229	R3HCC1	72	77.528	MGP_SPRETEiJ_G0020359	R3hcc1	68	77.528	Mus_spretus
ENSPCAG00000012229	R3HCC1	73	86.184	ENSMPUG00000003457	R3HCC1	68	86.184	Mustela_putorius_furo
ENSPCAG00000012229	R3HCC1	72	80.921	ENSMLUG00000000266	R3HCC1	72	80.921	Myotis_lucifugus
ENSPCAG00000012229	R3HCC1	72	82.051	ENSNGAG00000016747	R3hcc1	72	82.051	Nannospalax_galili
ENSPCAG00000012229	R3HCC1	63	86.726	ENSNLEG00000015944	R3HCC1	66	86.726	Nomascus_leucogenys
ENSPCAG00000012229	R3HCC1	71	71.711	ENSMEUG00000010587	R3HCC1	75	71.711	Notamacropus_eugenii
ENSPCAG00000012229	R3HCC1	75	78.710	ENSOPRG00000013390	R3HCC1	71	78.710	Ochotona_princeps
ENSPCAG00000012229	R3HCC1	65	82.313	ENSODEG00000007529	R3HCC1	62	83.673	Octodon_degus
ENSPCAG00000012229	R3HCC1	66	75.342	ENSOANG00000013877	R3HCC1	66	75.342	Ornithorhynchus_anatinus
ENSPCAG00000012229	R3HCC1	70	83.784	ENSOCUG00000023554	R3HCC1	65	83.784	Oryctolagus_cuniculus
ENSPCAG00000012229	R3HCC1	59	44.595	ENSORLG00000016816	r3hcc1	71	44.595	Oryzias_latipes
ENSPCAG00000012229	R3HCC1	61	43.919	ENSORLG00020012005	r3hcc1	74	43.919	Oryzias_latipes_hni
ENSPCAG00000012229	R3HCC1	61	44.595	ENSORLG00015007018	r3hcc1	74	44.595	Oryzias_latipes_hsok
ENSPCAG00000012229	R3HCC1	59	42.568	ENSOMEG00000000816	r3hcc1	71	42.568	Oryzias_melastigma
ENSPCAG00000012229	R3HCC1	76	81.290	ENSOGAG00000001291	R3HCC1	73	81.290	Otolemur_garnettii
ENSPCAG00000012229	R3HCC1	72	85.811	ENSOARG00000010146	R3HCC1	73	85.811	Ovis_aries
ENSPCAG00000012229	R3HCC1	73	83.871	ENSPPAG00000033165	R3HCC1	75	83.871	Pan_paniscus
ENSPCAG00000012229	R3HCC1	72	85.161	ENSPPRG00000002522	R3HCC1	75	85.161	Panthera_pardus
ENSPCAG00000012229	R3HCC1	64	84.516	ENSPTIG00000011230	R3HCC1	70	85.333	Panthera_tigris_altaica
ENSPCAG00000012229	R3HCC1	73	84.516	ENSPTRG00000020076	R3HCC1	73	84.516	Pan_troglodytes
ENSPCAG00000012229	R3HCC1	76	83.226	ENSPANG00000000453	R3HCC1	64	92.391	Papio_anubis
ENSPCAG00000012229	R3HCC1	60	48.227	ENSPKIG00000020397	-	68	48.227	Paramormyrops_kingsleyae
ENSPCAG00000012229	R3HCC1	60	48.227	ENSPKIG00000014426	-	74	48.227	Paramormyrops_kingsleyae
ENSPCAG00000012229	R3HCC1	73	60.000	ENSPSIG00000017664	R3HCC1	77	60.000	Pelodiscus_sinensis
ENSPCAG00000012229	R3HCC1	72	80.128	ENSPEMG00000007118	R3hcc1	69	80.128	Peromyscus_maniculatus_bairdii
ENSPCAG00000012229	R3HCC1	63	73.154	ENSPCIG00000022718	-	58	73.154	Phascolarctos_cinereus
ENSPCAG00000012229	R3HCC1	63	45.714	ENSPFOG00000022301	r3hcc1	63	45.714	Poecilia_formosa
ENSPCAG00000012229	R3HCC1	63	45.714	ENSPLAG00000010794	r3hcc1	63	45.714	Poecilia_latipinna
ENSPCAG00000012229	R3HCC1	63	45.714	ENSPMEG00000022515	r3hcc1	63	45.714	Poecilia_mexicana
ENSPCAG00000012229	R3HCC1	67	46.154	ENSPREG00000000713	r3hcc1	66	46.154	Poecilia_reticulata
ENSPCAG00000012229	R3HCC1	65	83.226	ENSPPYG00000018436	R3HCC1	73	83.226	Pongo_abelii
ENSPCAG00000012229	R3HCC1	72	83.766	ENSPCOG00000027554	R3HCC1	75	83.766	Propithecus_coquereli
ENSPCAG00000012229	R3HCC1	72	85.811	ENSPVAG00000009829	R3HCC1	73	85.811	Pteropus_vampyrus
ENSPCAG00000012229	R3HCC1	63	44.361	ENSPNAG00000023875	r3hcc1	74	44.361	Pygocentrus_nattereri
ENSPCAG00000012229	R3HCC1	69	83.544	ENSRNOG00000016777	AABR07018321.1	55	80.952	Rattus_norvegicus
ENSPCAG00000012229	R3HCC1	72	83.871	ENSRBIG00000028045	R3HCC1	75	83.871	Rhinopithecus_bieti
ENSPCAG00000012229	R3HCC1	76	83.871	ENSRROG00000031126	R3HCC1	64	92.391	Rhinopithecus_roxellana
ENSPCAG00000012229	R3HCC1	72	83.871	ENSSBOG00000022590	R3HCC1	75	83.871	Saimiri_boliviensis_boliviensis
ENSPCAG00000012229	R3HCC1	51	85.714	ENSSHAG00000016526	-	62	74.497	Sarcophilus_harrisii
ENSPCAG00000012229	R3HCC1	57	49.645	ENSSFOG00015013507	r3hcc1	68	49.645	Scleropages_formosus
ENSPCAG00000012229	R3HCC1	56	46.970	ENSSMAG00000008647	r3hcc1	62	46.970	Scophthalmus_maximus
ENSPCAG00000012229	R3HCC1	61	47.287	ENSSDUG00000022786	r3hcc1	63	47.287	Seriola_dumerili
ENSPCAG00000012229	R3HCC1	61	46.512	ENSSLDG00000019031	r3hcc1	69	46.512	Seriola_lalandi_dorsalis
ENSPCAG00000012229	R3HCC1	50	81.884	ENSSARG00000013514	-	52	81.884	Sorex_araneus
ENSPCAG00000012229	R3HCC1	58	49.242	ENSSPAG00000013497	r3hcc1	64	49.242	Stegastes_partitus
ENSPCAG00000012229	R3HCC1	73	75.862	ENSSSCG00000037347	-	70	72.340	Sus_scrofa
ENSPCAG00000012229	R3HCC1	74	86.093	ENSSSCG00000039915	-	73	86.093	Sus_scrofa
ENSPCAG00000012229	R3HCC1	60	42.647	ENSTRUG00000015880	r3hcc1	67	42.647	Takifugu_rubripes
ENSPCAG00000012229	R3HCC1	70	83.815	ENSTTRG00000012247	R3HCC1	74	78.610	Tursiops_truncatus
ENSPCAG00000012229	R3HCC1	72	83.553	ENSUAMG00000007344	R3HCC1	75	83.553	Ursus_americanus
ENSPCAG00000012229	R3HCC1	74	82.895	ENSVVUG00000005056	R3HCC1	73	82.895	Vulpes_vulpes
ENSPCAG00000012229	R3HCC1	64	45.833	ENSXCOG00000017626	r3hcc1	63	45.833	Xiphophorus_couchianus
ENSPCAG00000012229	R3HCC1	68	46.154	ENSXMAG00000018375	r3hcc1	63	46.154	Xiphophorus_maculatus