EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000012477 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 16082 bases
Position: chrscaffold_11977:22593-38674
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011680	Beta-Casp	PF10996.8	5e-21	1	1
ENSPCAP00000011680	Lactamase_B	PF00753.27	8.8e-07	1	1
ENSPCAP00000011680	RMMBL	PF07521.12	6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012501	CPSF2-201	2346	-	ENSPCAP00000011680	781 (aa)	-	UPI00018AE05C

Gene Model

Click here to download ENSPCAG00000012477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012477	CPSF2	100	99.488	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSPCAG00000012477	CPSF2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSPCAG00000012477	CPSF2	100	85.949	ENSACIG00000009331	cpsf2	100	85.949	Amphilophus_citrinellus
ENSPCAG00000012477	CPSF2	100	85.932	ENSAOCG00000014095	cpsf2	100	85.932	Amphiprion_ocellaris
ENSPCAG00000012477	CPSF2	100	85.932	ENSAPEG00000009158	cpsf2	100	85.932	Amphiprion_percula
ENSPCAG00000012477	CPSF2	96	85.921	ENSATEG00000017644	cpsf2	100	83.973	Anabas_testudineus
ENSPCAG00000012477	CPSF2	100	95.924	ENSAPLG00000006330	CPSF2	100	95.924	Anas_platyrhynchos
ENSPCAG00000012477	CPSF2	100	95.402	ENSACAG00000009245	CPSF2	100	95.402	Anolis_carolinensis
ENSPCAG00000012477	CPSF2	100	99.233	ENSANAG00000022915	CPSF2	100	99.233	Aotus_nancymaae
ENSPCAG00000012477	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSPCAG00000012477	CPSF2	100	99.361	ENSBTAG00000010227	CPSF2	100	99.361	Bos_taurus
ENSPCAG00000012477	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSPCAG00000012477	CPSF2	100	99.233	ENSCJAG00000018069	CPSF2	100	99.233	Callithrix_jacchus
ENSPCAG00000012477	CPSF2	100	99.233	ENSCAFG00000010909	CPSF2	100	99.233	Canis_familiaris
ENSPCAG00000012477	CPSF2	100	99.233	ENSCAFG00020020670	CPSF2	100	99.233	Canis_lupus_dingo
ENSPCAG00000012477	CPSF2	100	99.361	ENSCHIG00000023848	CPSF2	100	99.361	Capra_hircus
ENSPCAG00000012477	CPSF2	100	98.338	ENSTSYG00000009036	CPSF2	100	98.338	Carlito_syrichta
ENSPCAG00000012477	CPSF2	100	99.361	ENSCPOG00000010899	CPSF2	100	99.361	Cavia_porcellus
ENSPCAG00000012477	CPSF2	100	99.233	ENSCCAG00000028088	CPSF2	100	99.233	Cebus_capucinus
ENSPCAG00000012477	CPSF2	100	99.361	ENSCATG00000030132	CPSF2	100	99.361	Cercocebus_atys
ENSPCAG00000012477	CPSF2	100	99.233	ENSCLAG00000012404	CPSF2	100	99.233	Chinchilla_lanigera
ENSPCAG00000012477	CPSF2	100	99.361	ENSCSAG00000011300	CPSF2	100	99.361	Chlorocebus_sabaeus
ENSPCAG00000012477	CPSF2	100	92.327	ENSCHOG00000012904	CPSF2	100	92.327	Choloepus_hoffmanni
ENSPCAG00000012477	CPSF2	100	96.041	ENSCPBG00000008766	CPSF2	97	96.041	Chrysemys_picta_bellii
ENSPCAG00000012477	CPSF2	100	55.000	ENSCING00000007881	-	100	54.625	Ciona_intestinalis
ENSPCAG00000012477	CPSF2	94	99.317	ENSCANG00000041651	CPSF2	100	99.317	Colobus_angolensis_palliatus
ENSPCAG00000012477	CPSF2	100	98.338	ENSCGRG00001006901	Cpsf2	100	98.338	Cricetulus_griseus_chok1gshd
ENSPCAG00000012477	CPSF2	100	98.338	ENSCGRG00000012416	Cpsf2	100	98.338	Cricetulus_griseus_crigri
ENSPCAG00000012477	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSPCAG00000012477	CPSF2	100	84.918	ENSCVAG00000000095	cpsf2	100	85.044	Cyprinodon_variegatus
ENSPCAG00000012477	CPSF2	100	85.732	ENSDARG00000028971	cpsf2	100	85.732	Danio_rerio
ENSPCAG00000012477	CPSF2	100	99.105	ENSDNOG00000042757	CPSF2	100	99.105	Dasypus_novemcinctus
ENSPCAG00000012477	CPSF2	100	98.977	ENSDORG00000013709	Cpsf2	100	98.977	Dipodomys_ordii
ENSPCAG00000012477	CPSF2	100	53.865	FBgn0027873	Cpsf100	100	53.625	Drosophila_melanogaster
ENSPCAG00000012477	CPSF2	100	90.038	ENSETEG00000012123	CPSF2	100	90.038	Echinops_telfairi
ENSPCAG00000012477	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSPCAG00000012477	CPSF2	89	98.500	ENSEASG00005021193	CPSF2	100	98.500	Equus_asinus_asinus
ENSPCAG00000012477	CPSF2	100	99.105	ENSECAG00000023935	CPSF2	100	99.105	Equus_caballus
ENSPCAG00000012477	CPSF2	100	83.940	ENSELUG00000008442	cpsf2	100	83.940	Esox_lucius
ENSPCAG00000012477	CPSF2	100	99.105	ENSFCAG00000007886	CPSF2	100	99.105	Felis_catus
ENSPCAG00000012477	CPSF2	100	96.169	ENSFALG00000002412	CPSF2	100	96.169	Ficedula_albicollis
ENSPCAG00000012477	CPSF2	100	99.233	ENSFDAG00000006327	CPSF2	100	99.233	Fukomys_damarensis
ENSPCAG00000012477	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	98	85.098	Fundulus_heteroclitus
ENSPCAG00000012477	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSPCAG00000012477	CPSF2	100	95.913	ENSGALG00000010783	CPSF2	100	95.913	Gallus_gallus
ENSPCAG00000012477	CPSF2	100	85.171	ENSGAFG00000001407	cpsf2	100	85.171	Gambusia_affinis
ENSPCAG00000012477	CPSF2	100	84.537	ENSGACG00000008418	cpsf2	100	84.537	Gasterosteus_aculeatus
ENSPCAG00000012477	CPSF2	100	96.169	ENSGAGG00000008287	CPSF2	100	96.169	Gopherus_agassizii
ENSPCAG00000012477	CPSF2	100	99.488	ENSGGOG00000011799	CPSF2	100	99.488	Gorilla_gorilla
ENSPCAG00000012477	CPSF2	100	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSPCAG00000012477	CPSF2	100	99.105	ENSHGLG00000018311	CPSF2	100	99.105	Heterocephalus_glaber_female
ENSPCAG00000012477	CPSF2	100	99.105	ENSHGLG00100016460	CPSF2	100	99.105	Heterocephalus_glaber_male
ENSPCAG00000012477	CPSF2	100	84.411	ENSHCOG00000019527	cpsf2	98	84.411	Hippocampus_comes
ENSPCAG00000012477	CPSF2	100	85.515	ENSIPUG00000020857	cpsf2	100	85.515	Ictalurus_punctatus
ENSPCAG00000012477	CPSF2	100	99.233	ENSSTOG00000009528	CPSF2	100	99.233	Ictidomys_tridecemlineatus
ENSPCAG00000012477	CPSF2	100	98.849	ENSJJAG00000017925	Cpsf2	100	98.849	Jaculus_jaculus
ENSPCAG00000012477	CPSF2	100	84.411	ENSKMAG00000019429	cpsf2	100	84.411	Kryptolebias_marmoratus
ENSPCAG00000012477	CPSF2	95	84.358	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSPCAG00000012477	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	89.783	Latimeria_chalumnae
ENSPCAG00000012477	CPSF2	100	87.579	ENSLOCG00000014102	cpsf2	100	87.579	Lepisosteus_oculatus
ENSPCAG00000012477	CPSF2	100	99.362	ENSLAFG00000004891	CPSF2	100	99.362	Loxodonta_africana
ENSPCAG00000012477	CPSF2	100	99.361	ENSMFAG00000041212	CPSF2	100	99.361	Macaca_fascicularis
ENSPCAG00000012477	CPSF2	100	99.361	ENSMMUG00000000699	CPSF2	100	99.361	Macaca_mulatta
ENSPCAG00000012477	CPSF2	100	99.361	ENSMNEG00000031584	CPSF2	100	99.361	Macaca_nemestrina
ENSPCAG00000012477	CPSF2	100	99.361	ENSMLEG00000029394	CPSF2	100	99.361	Mandrillus_leucophaeus
ENSPCAG00000012477	CPSF2	100	85.678	ENSMAMG00000004235	cpsf2	100	85.678	Mastacembelus_armatus
ENSPCAG00000012477	CPSF2	100	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSPCAG00000012477	CPSF2	100	95.918	ENSMGAG00000013122	CPSF2	100	95.918	Meleagris_gallopavo
ENSPCAG00000012477	CPSF2	100	98.338	ENSMAUG00000015160	Cpsf2	100	98.338	Mesocricetus_auratus
ENSPCAG00000012477	CPSF2	100	99.233	ENSMICG00000016441	CPSF2	100	99.233	Microcebus_murinus
ENSPCAG00000012477	CPSF2	100	98.338	ENSMOCG00000015372	Cpsf2	100	98.338	Microtus_ochrogaster
ENSPCAG00000012477	CPSF2	100	80.735	ENSMMOG00000015590	cpsf2	100	80.735	Mola_mola
ENSPCAG00000012477	CPSF2	100	98.465	ENSMODG00000002042	CPSF2	100	98.465	Monodelphis_domestica
ENSPCAG00000012477	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSPCAG00000012477	CPSF2	100	97.826	ENSMUSG00000041781	Cpsf2	100	97.826	Mus_musculus
ENSPCAG00000012477	CPSF2	100	98.082	MGP_PahariEiJ_G0029791	Cpsf2	100	98.082	Mus_pahari
ENSPCAG00000012477	CPSF2	100	97.826	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.826	Mus_spretus
ENSPCAG00000012477	CPSF2	100	99.233	ENSMPUG00000007617	CPSF2	98	99.233	Mustela_putorius_furo
ENSPCAG00000012477	CPSF2	100	98.465	ENSMLUG00000005570	CPSF2	100	98.465	Myotis_lucifugus
ENSPCAG00000012477	CPSF2	100	98.593	ENSNGAG00000020312	Cpsf2	100	98.593	Nannospalax_galili
ENSPCAG00000012477	CPSF2	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSPCAG00000012477	CPSF2	100	98.593	ENSNLEG00000017132	CPSF2	100	98.593	Nomascus_leucogenys
ENSPCAG00000012477	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSPCAG00000012477	CPSF2	94	91.530	ENSOPRG00000008484	-	100	91.530	Ochotona_princeps
ENSPCAG00000012477	CPSF2	100	98.977	ENSODEG00000008682	CPSF2	100	98.977	Octodon_degus
ENSPCAG00000012477	CPSF2	100	86.058	ENSONIG00000005901	cpsf2	100	86.058	Oreochromis_niloticus
ENSPCAG00000012477	CPSF2	100	98.210	ENSOANG00000003822	CPSF2	100	98.210	Ornithorhynchus_anatinus
ENSPCAG00000012477	CPSF2	100	98.849	ENSOCUG00000005713	CPSF2	100	98.849	Oryctolagus_cuniculus
ENSPCAG00000012477	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSPCAG00000012477	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSPCAG00000012477	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSPCAG00000012477	CPSF2	100	84.030	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSPCAG00000012477	CPSF2	100	96.301	ENSOARG00000012889	CPSF2	100	96.301	Ovis_aries
ENSPCAG00000012477	CPSF2	100	99.488	ENSPPAG00000039666	CPSF2	100	99.488	Pan_paniscus
ENSPCAG00000012477	CPSF2	99	99.104	ENSPPRG00000010869	CPSF2	100	99.104	Panthera_pardus
ENSPCAG00000012477	CPSF2	100	99.105	ENSPTIG00000021202	CPSF2	100	99.105	Panthera_tigris_altaica
ENSPCAG00000012477	CPSF2	100	99.488	ENSPTRG00000006651	CPSF2	100	99.488	Pan_troglodytes
ENSPCAG00000012477	CPSF2	100	99.361	ENSPANG00000017417	CPSF2	100	99.361	Papio_anubis
ENSPCAG00000012477	CPSF2	100	82.084	ENSPKIG00000021453	cpsf2	100	82.084	Paramormyrops_kingsleyae
ENSPCAG00000012477	CPSF2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSPCAG00000012477	CPSF2	76	79.236	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSPCAG00000012477	CPSF2	100	98.593	ENSPEMG00000007917	Cpsf2	100	98.593	Peromyscus_maniculatus_bairdii
ENSPCAG00000012477	CPSF2	100	74.463	ENSPMAG00000006205	cpsf2	100	74.463	Petromyzon_marinus
ENSPCAG00000012477	CPSF2	100	98.465	ENSPCIG00000011393	CPSF2	100	98.465	Phascolarctos_cinereus
ENSPCAG00000012477	CPSF2	100	85.044	ENSPFOG00000018648	cpsf2	100	85.044	Poecilia_formosa
ENSPCAG00000012477	CPSF2	100	85.044	ENSPLAG00000019199	cpsf2	99	85.044	Poecilia_latipinna
ENSPCAG00000012477	CPSF2	96	85.395	ENSPMEG00000012100	cpsf2	100	84.759	Poecilia_mexicana
ENSPCAG00000012477	CPSF2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
ENSPCAG00000012477	CPSF2	63	99.194	ENSPPYG00000029685	-	100	99.194	Pongo_abelii
ENSPCAG00000012477	CPSF2	100	99.233	ENSPCOG00000026387	CPSF2	100	99.233	Propithecus_coquereli
ENSPCAG00000012477	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSPCAG00000012477	CPSF2	100	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSPCAG00000012477	CPSF2	100	86.658	ENSPNAG00000001849	cpsf2	100	86.658	Pygocentrus_nattereri
ENSPCAG00000012477	CPSF2	100	97.954	ENSRNOG00000005733	Cpsf2	100	97.954	Rattus_norvegicus
ENSPCAG00000012477	CPSF2	100	99.361	ENSRBIG00000044792	CPSF2	100	99.361	Rhinopithecus_bieti
ENSPCAG00000012477	CPSF2	100	99.361	ENSRROG00000034875	CPSF2	100	99.361	Rhinopithecus_roxellana
ENSPCAG00000012477	CPSF2	100	99.233	ENSSBOG00000024571	CPSF2	100	99.233	Saimiri_boliviensis_boliviensis
ENSPCAG00000012477	CPSF2	100	98.593	ENSSHAG00000010458	CPSF2	100	98.593	Sarcophilus_harrisii
ENSPCAG00000012477	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSPCAG00000012477	CPSF2	100	84.030	ENSSMAG00000002001	cpsf2	100	84.030	Scophthalmus_maximus
ENSPCAG00000012477	CPSF2	100	86.185	ENSSDUG00000004084	cpsf2	100	86.185	Seriola_dumerili
ENSPCAG00000012477	CPSF2	100	85.678	ENSSLDG00000024330	cpsf2	100	85.678	Seriola_lalandi_dorsalis
ENSPCAG00000012477	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSPCAG00000012477	CPSF2	100	95.658	ENSSPUG00000013485	CPSF2	100	95.658	Sphenodon_punctatus
ENSPCAG00000012477	CPSF2	100	85.171	ENSSPAG00000013284	cpsf2	100	85.171	Stegastes_partitus
ENSPCAG00000012477	CPSF2	100	99.105	ENSSSCG00000002447	CPSF2	100	99.105	Sus_scrofa
ENSPCAG00000012477	CPSF2	100	96.296	ENSTGUG00000012571	-	100	96.296	Taeniopygia_guttata
ENSPCAG00000012477	CPSF2	100	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSPCAG00000012477	CPSF2	100	83.692	ENSTNIG00000012228	cpsf2	100	84.450	Tetraodon_nigroviridis
ENSPCAG00000012477	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSPCAG00000012477	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSPCAG00000012477	CPSF2	100	99.361	ENSUAMG00000028071	CPSF2	100	99.361	Ursus_americanus
ENSPCAG00000012477	CPSF2	100	99.361	ENSUMAG00000005029	CPSF2	100	99.361	Ursus_maritimus
ENSPCAG00000012477	CPSF2	99	99.232	ENSVPAG00000003503	CPSF2	100	99.232	Vicugna_pacos
ENSPCAG00000012477	CPSF2	100	99.233	ENSVVUG00000024642	CPSF2	100	99.233	Vulpes_vulpes
ENSPCAG00000012477	CPSF2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSPCAG00000012477	CPSF2	100	85.298	ENSXCOG00000001764	cpsf2	100	85.298	Xiphophorus_couchianus
ENSPCAG00000012477	CPSF2	100	85.425	ENSXMAG00000017048	cpsf2	100	85.425	Xiphophorus_maculatus