EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000012510 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 46325 bases
Position: chrGeneScaffold_773:16564-62888
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011741	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012566	TNRC6C-201	5226	-	ENSPCAP00000011741	1741 (aa)	-	UPI00018AF101

Gene Model

Click here to download ENSPCAG00000012510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000012510	TNRC6C	76	47.872	ENSPCAG00000008260	TNRC6A	66	46.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012510	TNRC6C	91	92.654	ENSG00000078687	TNRC6C	93	92.654	Homo_sapiens
ENSPCAG00000012510	TNRC6C	67	66.590	ENSAPOG00000019749	tnrc6c1	87	67.040	Acanthochromis_polyacanthus
ENSPCAG00000012510	TNRC6C	90	87.554	ENSAMEG00000013756	TNRC6C	88	87.168	Ailuropoda_melanoleuca
ENSPCAG00000012510	TNRC6C	69	60.776	ENSACIG00000008075	tnrc6c1	83	62.500	Amphilophus_citrinellus
ENSPCAG00000012510	TNRC6C	81	66.590	ENSAOCG00000023968	tnrc6c1	66	89.474	Amphiprion_ocellaris
ENSPCAG00000012510	TNRC6C	84	66.590	ENSAPEG00000009020	tnrc6c1	68	67.489	Amphiprion_percula
ENSPCAG00000012510	TNRC6C	91	88.462	ENSAPLG00000005456	TNRC6C	83	88.106	Anas_platyrhynchos
ENSPCAG00000012510	TNRC6C	91	88.462	ENSACAG00000016198	TNRC6C	82	88.106	Anolis_carolinensis
ENSPCAG00000012510	TNRC6C	91	92.180	ENSANAG00000021554	TNRC6C	93	92.180	Aotus_nancymaae
ENSPCAG00000012510	TNRC6C	89	61.388	ENSACLG00000000424	tnrc6c1	84	61.822	Astatotilapia_calliptera
ENSPCAG00000012510	TNRC6C	90	90.129	ENSBTAG00000018658	TNRC6C	93	91.943	Bos_taurus
ENSPCAG00000012510	TNRC6C	91	91.706	ENSCJAG00000019431	TNRC6C	93	91.706	Callithrix_jacchus
ENSPCAG00000012510	TNRC6C	94	85.683	ENSCAFG00000005224	TNRC6C	92	84.816	Canis_familiaris
ENSPCAG00000012510	TNRC6C	94	93.839	ENSCAFG00020006661	TNRC6C	93	89.336	Canis_lupus_dingo
ENSPCAG00000012510	TNRC6C	94	92.891	ENSCHIG00000026004	TNRC6C	90	92.891	Capra_hircus
ENSPCAG00000012510	TNRC6C	91	85.466	ENSTSYG00000005403	TNRC6C	93	85.683	Carlito_syrichta
ENSPCAG00000012510	TNRC6C	91	82.464	ENSCAPG00000007307	TNRC6C	83	81.991	Cavia_aperea
ENSPCAG00000012510	TNRC6C	94	92.417	ENSCPOG00000000467	TNRC6C	93	92.417	Cavia_porcellus
ENSPCAG00000012510	TNRC6C	91	92.417	ENSCCAG00000030524	TNRC6C	93	92.417	Cebus_capucinus
ENSPCAG00000012510	TNRC6C	91	92.654	ENSCATG00000033135	TNRC6C	93	92.654	Cercocebus_atys
ENSPCAG00000012510	TNRC6C	94	92.654	ENSCLAG00000011139	TNRC6C	86	92.654	Chinchilla_lanigera
ENSPCAG00000012510	TNRC6C	94	84.599	ENSCSAG00000005167	TNRC6C	86	84.816	Chlorocebus_sabaeus
ENSPCAG00000012510	TNRC6C	66	92.241	ENSCHOG00000000088	TNRC6C	65	92.478	Choloepus_hoffmanni
ENSPCAG00000012510	TNRC6C	90	90.521	ENSCPBG00000027960	TNRC6C	93	90.521	Chrysemys_picta_bellii
ENSPCAG00000012510	TNRC6C	91	92.891	ENSCANG00000041771	TNRC6C	93	92.891	Colobus_angolensis_palliatus
ENSPCAG00000012510	TNRC6C	90	92.180	ENSCGRG00001022686	Tnrc6c	93	88.389	Cricetulus_griseus_chok1gshd
ENSPCAG00000012510	TNRC6C	90	92.180	ENSCGRG00000018041	Tnrc6c	93	88.389	Cricetulus_griseus_crigri
ENSPCAG00000012510	TNRC6C	89	65.541	ENSCSEG00000012744	tnrc6c1	82	65.541	Cynoglossus_semilaevis
ENSPCAG00000012510	TNRC6C	89	71.202	ENSDARG00000076847	tnrc6c1	81	70.175	Danio_rerio
ENSPCAG00000012510	TNRC6C	94	84.816	ENSDNOG00000003247	TNRC6C	88	85.033	Dasypus_novemcinctus
ENSPCAG00000012510	TNRC6C	89	91.943	ENSDORG00000004558	Tnrc6c	90	91.943	Dipodomys_ordii
ENSPCAG00000012510	TNRC6C	84	86.493	ENSETEG00000005527	TNRC6C	84	86.493	Echinops_telfairi
ENSPCAG00000012510	TNRC6C	86	92.671	ENSEASG00005004799	TNRC6C	95	92.671	Equus_asinus_asinus
ENSPCAG00000012510	TNRC6C	89	92.671	ENSECAG00000012486	TNRC6C	87	92.671	Equus_caballus
ENSPCAG00000012510	TNRC6C	90	81.087	ENSEEUG00000010008	TNRC6C	90	81.087	Erinaceus_europaeus
ENSPCAG00000012510	TNRC6C	91	93.365	ENSFCAG00000028358	TNRC6C	93	93.365	Felis_catus
ENSPCAG00000012510	TNRC6C	88	87.660	ENSFALG00000000848	TNRC6C	88	87.281	Ficedula_albicollis
ENSPCAG00000012510	TNRC6C	94	92.180	ENSFDAG00000010368	TNRC6C	93	92.180	Fukomys_damarensis
ENSPCAG00000012510	TNRC6C	63	97.619	ENSFHEG00000002936	tnrc6c1	68	60.870	Fundulus_heteroclitus
ENSPCAG00000012510	TNRC6C	91	91.469	ENSGALG00000001725	TNRC6C	95	91.469	Gallus_gallus
ENSPCAG00000012510	TNRC6C	89	65.924	ENSGAFG00000019019	tnrc6c1	72	65.924	Gambusia_affinis
ENSPCAG00000012510	TNRC6C	67	64.045	ENSGACG00000012320	tnrc6c1	63	63.820	Gasterosteus_aculeatus
ENSPCAG00000012510	TNRC6C	94	90.521	ENSGAGG00000022043	TNRC6C	92	90.521	Gopherus_agassizii
ENSPCAG00000012510	TNRC6C	91	92.435	ENSGGOG00000011304	TNRC6C	93	92.199	Gorilla_gorilla
ENSPCAG00000012510	TNRC6C	89	66.140	ENSHBUG00000010846	tnrc6c1	84	61.822	Haplochromis_burtoni
ENSPCAG00000012510	TNRC6C	94	91.943	ENSHGLG00000004809	TNRC6C	86	91.943	Heterocephalus_glaber_female
ENSPCAG00000012510	TNRC6C	94	89.336	ENSHGLG00100012597	TNRC6C	86	90.995	Heterocephalus_glaber_male
ENSPCAG00000012510	TNRC6C	90	71.368	ENSIPUG00000000818	tnrc6c1	81	70.925	Ictalurus_punctatus
ENSPCAG00000012510	TNRC6C	94	92.417	ENSSTOG00000009101	TNRC6C	93	92.417	Ictidomys_tridecemlineatus
ENSPCAG00000012510	TNRC6C	94	91.943	ENSJJAG00000017055	Tnrc6c	85	91.943	Jaculus_jaculus
ENSPCAG00000012510	TNRC6C	68	66.129	ENSKMAG00000021023	tnrc6c1	85	67.512	Kryptolebias_marmoratus
ENSPCAG00000012510	TNRC6C	94	68.213	ENSLACG00000015283	TNRC6C	94	68.213	Latimeria_chalumnae
ENSPCAG00000012510	TNRC6C	93	75.694	ENSLOCG00000013377	tnrc6c1	85	75.694	Lepisosteus_oculatus
ENSPCAG00000012510	TNRC6C	90	94.787	ENSLAFG00000011122	TNRC6C	87	94.787	Loxodonta_africana
ENSPCAG00000012510	TNRC6C	91	92.654	ENSMFAG00000043943	TNRC6C	93	92.654	Macaca_fascicularis
ENSPCAG00000012510	TNRC6C	91	92.654	ENSMMUG00000011924	TNRC6C	93	92.654	Macaca_mulatta
ENSPCAG00000012510	TNRC6C	91	92.654	ENSMNEG00000030405	TNRC6C	93	92.654	Macaca_nemestrina
ENSPCAG00000012510	TNRC6C	91	92.654	ENSMLEG00000033436	TNRC6C	93	92.654	Mandrillus_leucophaeus
ENSPCAG00000012510	TNRC6C	79	60.851	ENSMAMG00000023613	tnrc6c1	86	66.742	Mastacembelus_armatus
ENSPCAG00000012510	TNRC6C	89	66.140	ENSMZEG00005010920	tnrc6c1	84	61.822	Maylandia_zebra
ENSPCAG00000012510	TNRC6C	91	88.462	ENSMGAG00000003906	TNRC6C	83	88.106	Meleagris_gallopavo
ENSPCAG00000012510	TNRC6C	87	92.180	ENSMAUG00000021618	Tnrc6c	93	92.180	Mesocricetus_auratus
ENSPCAG00000012510	TNRC6C	91	92.891	ENSMICG00000003952	TNRC6C	93	92.891	Microcebus_murinus
ENSPCAG00000012510	TNRC6C	90	92.654	ENSMOCG00000015879	Tnrc6c	93	92.654	Microtus_ochrogaster
ENSPCAG00000012510	TNRC6C	70	66.892	ENSMMOG00000005203	tnrc6c1	85	66.892	Mola_mola
ENSPCAG00000012510	TNRC6C	94	90.521	ENSMODG00000001785	TNRC6C	86	90.521	Monodelphis_domestica
ENSPCAG00000012510	TNRC6C	90	92.891	MGP_CAROLIEiJ_G0017465	Tnrc6c	93	92.891	Mus_caroli
ENSPCAG00000012510	TNRC6C	90	92.654	ENSMUSG00000025571	Tnrc6c	93	92.654	Mus_musculus
ENSPCAG00000012510	TNRC6C	90	93.128	MGP_PahariEiJ_G0018593	Tnrc6c	93	93.128	Mus_pahari
ENSPCAG00000012510	TNRC6C	90	92.654	MGP_SPRETEiJ_G0018309	Tnrc6c	93	92.654	Mus_spretus
ENSPCAG00000012510	TNRC6C	90	87.983	ENSMPUG00000013348	TNRC6C	85	85.900	Mustela_putorius_furo
ENSPCAG00000012510	TNRC6C	91	90.129	ENSMLUG00000014431	TNRC6C	81	88.053	Myotis_lucifugus
ENSPCAG00000012510	TNRC6C	90	92.180	ENSNGAG00000012203	Tnrc6c	86	92.180	Nannospalax_galili
ENSPCAG00000012510	TNRC6C	89	65.914	ENSNBRG00000005344	tnrc6c1	84	61.822	Neolamprologus_brichardi
ENSPCAG00000012510	TNRC6C	94	84.816	ENSNLEG00000000047	TNRC6C	86	85.033	Nomascus_leucogenys
ENSPCAG00000012510	TNRC6C	91	85.488	ENSMEUG00000005104	TNRC6C	91	85.488	Notamacropus_eugenii
ENSPCAG00000012510	TNRC6C	91	92.654	ENSODEG00000012499	TNRC6C	93	92.654	Octodon_degus
ENSPCAG00000012510	TNRC6C	84	66.290	ENSONIG00000002210	tnrc6c1	82	66.742	Oreochromis_niloticus
ENSPCAG00000012510	TNRC6C	90	89.336	ENSOANG00000009758	-	77	89.336	Ornithorhynchus_anatinus
ENSPCAG00000012510	TNRC6C	72	87.069	ENSOCUG00000006122	TNRC6C	76	86.826	Oryctolagus_cuniculus
ENSPCAG00000012510	TNRC6C	93	65.848	ENSORLG00000009837	tnrc6c1	100	66.543	Oryzias_latipes
ENSPCAG00000012510	TNRC6C	84	66.071	ENSORLG00020016510	tnrc6c1	85	65.625	Oryzias_latipes_hni
ENSPCAG00000012510	TNRC6C	70	55.319	ENSORLG00015000171	tnrc6c1	81	55.319	Oryzias_latipes_hsok
ENSPCAG00000012510	TNRC6C	78	65.702	ENSOMEG00000000357	tnrc6c1	86	65.479	Oryzias_melastigma
ENSPCAG00000012510	TNRC6C	87	88.372	ENSOGAG00000007197	TNRC6C	89	87.981	Otolemur_garnettii
ENSPCAG00000012510	TNRC6C	89	83.979	ENSOARG00000006041	TNRC6C	83	84.409	Ovis_aries
ENSPCAG00000012510	TNRC6C	91	92.417	ENSPPAG00000027160	TNRC6C	93	92.417	Pan_paniscus
ENSPCAG00000012510	TNRC6C	91	93.128	ENSPPRG00000018881	TNRC6C	93	93.128	Panthera_pardus
ENSPCAG00000012510	TNRC6C	84	93.696	ENSPTIG00000008791	TNRC6C	81	93.696	Panthera_tigris_altaica
ENSPCAG00000012510	TNRC6C	91	92.654	ENSPTRG00000009699	TNRC6C	93	92.654	Pan_troglodytes
ENSPCAG00000012510	TNRC6C	91	92.654	ENSPANG00000019994	TNRC6C	93	92.654	Papio_anubis
ENSPCAG00000012510	TNRC6C	83	72.851	ENSPKIG00000005428	tnrc6c1	87	70.690	Paramormyrops_kingsleyae
ENSPCAG00000012510	TNRC6C	94	90.995	ENSPSIG00000018069	TNRC6C	93	90.995	Pelodiscus_sinensis
ENSPCAG00000012510	TNRC6C	60	71.053	ENSPMGG00000022911	tnrc6c1	96	64.050	Periophthalmus_magnuspinnatus
ENSPCAG00000012510	TNRC6C	94	92.417	ENSPEMG00000009785	Tnrc6c	85	92.417	Peromyscus_maniculatus_bairdii
ENSPCAG00000012510	TNRC6C	56	73.442	ENSPCIG00000017421	-	99	73.340	Phascolarctos_cinereus
ENSPCAG00000012510	TNRC6C	89	66.222	ENSPFOG00000012560	tnrc6c1	79	66.222	Poecilia_formosa
ENSPCAG00000012510	TNRC6C	84	66.222	ENSPLAG00000021055	tnrc6c1	86	66.222	Poecilia_latipinna
ENSPCAG00000012510	TNRC6C	94	85.033	ENSPPYG00000008679	TNRC6C	85	85.249	Pongo_abelii
ENSPCAG00000012510	TNRC6C	91	92.891	ENSPCOG00000021451	TNRC6C	93	92.891	Propithecus_coquereli
ENSPCAG00000012510	TNRC6C	90	93.103	ENSPVAG00000002008	TNRC6C	89	92.952	Pteropus_vampyrus
ENSPCAG00000012510	TNRC6C	89	61.388	ENSPNYG00000014477	tnrc6c1	84	61.822	Pundamilia_nyererei
ENSPCAG00000012510	TNRC6C	91	92.654	ENSRNOG00000022395	Tnrc6c	93	92.654	Rattus_norvegicus
ENSPCAG00000012510	TNRC6C	91	92.891	ENSRBIG00000027777	TNRC6C	93	92.891	Rhinopithecus_bieti
ENSPCAG00000012510	TNRC6C	91	92.891	ENSRROG00000042912	TNRC6C	93	92.891	Rhinopithecus_roxellana
ENSPCAG00000012510	TNRC6C	94	85.714	ENSSBOG00000023981	TNRC6C	93	84.599	Saimiri_boliviensis_boliviensis
ENSPCAG00000012510	TNRC6C	61	69.333	ENSSFOG00015006475	tnrc6c1	66	69.142	Scleropages_formosus
ENSPCAG00000012510	TNRC6C	60	56.739	ENSSFOG00015004735	-	99	60.313	Scleropages_formosus
ENSPCAG00000012510	TNRC6C	93	64.865	ENSSMAG00000012761	tnrc6c1	71	65.541	Scophthalmus_maximus
ENSPCAG00000012510	TNRC6C	89	67.117	ENSSDUG00000002366	tnrc6c1	67	67.489	Seriola_dumerili
ENSPCAG00000012510	TNRC6C	84	66.892	ENSSLDG00000025613	tnrc6c1	72	66.892	Seriola_lalandi_dorsalis
ENSPCAG00000012510	TNRC6C	90	88.362	ENSSARG00000006816	TNRC6C	89	88.106	Sorex_araneus
ENSPCAG00000012510	TNRC6C	71	85.537	ENSSPUG00000007341	TNRC6C	80	85.106	Sphenodon_punctatus
ENSPCAG00000012510	TNRC6C	58	66.587	ENSSPAG00000014977	tnrc6c1	66	66.274	Stegastes_partitus
ENSPCAG00000012510	TNRC6C	91	92.180	ENSSSCG00000034373	TNRC6C	93	92.180	Sus_scrofa
ENSPCAG00000012510	TNRC6C	94	91.469	ENSTGUG00000007733	TNRC6C	93	91.469	Taeniopygia_guttata
ENSPCAG00000012510	TNRC6C	65	65.604	ENSTRUG00000011685	tnrc6c1	65	66.059	Takifugu_rubripes
ENSPCAG00000012510	TNRC6C	67	67.048	ENSTNIG00000005273	tnrc6c1	81	61.181	Tetraodon_nigroviridis
ENSPCAG00000012510	TNRC6C	59	88.281	ENSTBEG00000005046	TNRC6C	90	88.281	Tupaia_belangeri
ENSPCAG00000012510	TNRC6C	94	93.365	ENSTTRG00000010828	TNRC6C	93	93.365	Tursiops_truncatus
ENSPCAG00000012510	TNRC6C	88	94.076	ENSUMAG00000013614	TNRC6C	82	94.076	Ursus_maritimus
ENSPCAG00000012510	TNRC6C	91	94.076	ENSVVUG00000015268	TNRC6C	93	94.076	Vulpes_vulpes
ENSPCAG00000012510	TNRC6C	87	82.547	ENSXETG00000019470	tnrc6c	90	82.547	Xenopus_tropicalis
ENSPCAG00000012510	TNRC6C	89	66.743	ENSXMAG00000025971	tnrc6c1	71	66.147	Xiphophorus_maculatus