EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000012617 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 31794 bases
Position: chrscaffold_781:27669-59462
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000011822	KH_1	PF00013.29	9.6e-70	1	4
ENSPCAP00000011822	KH_1	PF00013.29	9.6e-70	2	4
ENSPCAP00000011822	KH_1	PF00013.29	9.6e-70	3	4
ENSPCAP00000011822	KH_1	PF00013.29	9.6e-70	4	4
ENSPCAP00000011822	KH_2	PF07650.17	1e-22	1	2
ENSPCAP00000011822	KH_2	PF07650.17	1e-22	2	2
ENSPCAP00000011822	DUF1897	PF09005.10	4.9e-12	1	2
ENSPCAP00000011822	DUF1897	PF09005.10	4.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012655	FUBP1-201	1965	-	ENSPCAP00000011822	654 (aa)	-	UPI00018AFE8C

Gene Model

Click here to download ENSPCAG00000012617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000012617	FUBP1	74	62.755	ENSPCAG00000000246	KHSRP	76	58.352
ENSPCAG00000012617	FUBP1	72	61.538	ENSPCAG00000001717	FUBP3	81	61.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012617	FUBP1	100	98.931	ENSG00000162613	FUBP1	100	98.931	Homo_sapiens
ENSPCAG00000012617	FUBP1	100	69.184	ENSAPOG00000014845	fubp1	70	75.599	Acanthochromis_polyacanthus
ENSPCAG00000012617	FUBP1	98	95.796	ENSAMEG00000007372	FUBP1	99	95.796	Ailuropoda_melanoleuca
ENSPCAG00000012617	FUBP1	98	69.385	ENSACIG00000020024	fubp1	69	73.846	Amphilophus_citrinellus
ENSPCAG00000012617	FUBP1	98	67.747	ENSAPEG00000012232	fubp1	72	76.586	Amphiprion_percula
ENSPCAG00000012617	FUBP1	99	71.037	ENSATEG00000018619	fubp1	70	77.704	Anabas_testudineus
ENSPCAG00000012617	FUBP1	92	97.347	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSPCAG00000012617	FUBP1	98	86.131	ENSACAG00000006310	FUBP1	96	87.262	Anolis_carolinensis
ENSPCAG00000012617	FUBP1	98	71.275	ENSACLG00000006708	fubp1	72	77.925	Astatotilapia_calliptera
ENSPCAG00000012617	FUBP1	86	78.409	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSPCAG00000012617	FUBP1	100	98.779	ENSCJAG00000007062	FUBP1	100	98.779	Callithrix_jacchus
ENSPCAG00000012617	FUBP1	98	99.222	ENSCAFG00000020361	FUBP1	99	99.222	Canis_familiaris
ENSPCAG00000012617	FUBP1	94	99.024	ENSTSYG00000000148	FUBP1	100	99.024	Carlito_syrichta
ENSPCAG00000012617	FUBP1	57	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSPCAG00000012617	FUBP1	100	98.480	ENSCPOG00000002757	FUBP1	100	98.480	Cavia_porcellus
ENSPCAG00000012617	FUBP1	100	84.104	ENSCCAG00000036537	FUBP1	100	84.393	Cebus_capucinus
ENSPCAG00000012617	FUBP1	100	98.779	ENSCATG00000042126	FUBP1	100	98.779	Cercocebus_atys
ENSPCAG00000012617	FUBP1	100	98.931	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSPCAG00000012617	FUBP1	98	99.067	ENSCSAG00000001402	FUBP1	99	99.067	Chlorocebus_sabaeus
ENSPCAG00000012617	FUBP1	100	99.084	ENSCHOG00000008177	FUBP1	100	99.084	Choloepus_hoffmanni
ENSPCAG00000012617	FUBP1	100	98.021	ENSCGRG00001007103	Fubp1	100	98.021	Cricetulus_griseus_chok1gshd
ENSPCAG00000012617	FUBP1	94	98.706	ENSCGRG00000003372	Fubp1	100	98.706	Cricetulus_griseus_crigri
ENSPCAG00000012617	FUBP1	98	70.724	ENSCSEG00000021412	fubp1	70	76.535	Cynoglossus_semilaevis
ENSPCAG00000012617	FUBP1	98	68.889	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSPCAG00000012617	FUBP1	98	69.369	ENSDARG00000029248	fubp1	70	76.724	Danio_rerio
ENSPCAG00000012617	FUBP1	66	74.648	ENSDNOG00000034565	-	81	73.684	Dasypus_novemcinctus
ENSPCAG00000012617	FUBP1	100	98.626	ENSDORG00000016534	Fubp1	100	98.626	Dipodomys_ordii
ENSPCAG00000012617	FUBP1	77	97.977	ENSETEG00000000948	-	62	97.977	Echinops_telfairi
ENSPCAG00000012617	FUBP1	81	47.559	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSPCAG00000012617	FUBP1	100	85.344	ENSEEUG00000001287	FUBP1	100	85.344	Erinaceus_europaeus
ENSPCAG00000012617	FUBP1	98	68.085	ENSELUG00000007990	fubp1	70	74.459	Esox_lucius
ENSPCAG00000012617	FUBP1	98	96.273	ENSFALG00000005768	FUBP1	98	96.273	Ficedula_albicollis
ENSPCAG00000012617	FUBP1	100	98.931	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSPCAG00000012617	FUBP1	98	71.298	ENSFHEG00000005230	fubp1	70	78.337	Fundulus_heteroclitus
ENSPCAG00000012617	FUBP1	98	66.410	ENSGMOG00000003370	fubp1	70	69.890	Gadus_morhua
ENSPCAG00000012617	FUBP1	98	96.739	ENSGALG00000008939	FUBP1	99	96.739	Gallus_gallus
ENSPCAG00000012617	FUBP1	98	69.820	ENSGAFG00000020972	fubp1	91	77.727	Gambusia_affinis
ENSPCAG00000012617	FUBP1	98	70.245	ENSGACG00000016563	fubp1	70	75.824	Gasterosteus_aculeatus
ENSPCAG00000012617	FUBP1	98	70.134	ENSHBUG00000009835	fubp1	85	76.872	Haplochromis_burtoni
ENSPCAG00000012617	FUBP1	71	90.968	ENSHGLG00000002808	-	72	90.789	Heterocephalus_glaber_female
ENSPCAG00000012617	FUBP1	100	98.632	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSPCAG00000012617	FUBP1	100	98.632	ENSHGLG00100003417	-	100	98.632	Heterocephalus_glaber_male
ENSPCAG00000012617	FUBP1	71	91.828	ENSHGLG00100001414	-	72	91.447	Heterocephalus_glaber_male
ENSPCAG00000012617	FUBP1	98	68.161	ENSHCOG00000000910	fubp1	70	74.681	Hippocampus_comes
ENSPCAG00000012617	FUBP1	98	74.238	ENSIPUG00000009896	fubp1	70	76.790	Ictalurus_punctatus
ENSPCAG00000012617	FUBP1	100	98.632	ENSSTOG00000014312	FUBP1	100	98.632	Ictidomys_tridecemlineatus
ENSPCAG00000012617	FUBP1	100	96.330	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSPCAG00000012617	FUBP1	98	70.308	ENSKMAG00000018897	fubp1	69	76.380	Kryptolebias_marmoratus
ENSPCAG00000012617	FUBP1	98	67.267	ENSLBEG00000012700	fubp1	72	74.737	Labrus_bergylta
ENSPCAG00000012617	FUBP1	96	71.302	ENSLOCG00000003745	fubp1	69	74.127	Lepisosteus_oculatus
ENSPCAG00000012617	FUBP1	100	96.296	ENSLAFG00000003273	FUBP1	99	98.014	Loxodonta_africana
ENSPCAG00000012617	FUBP1	100	98.779	ENSMFAG00000031825	FUBP1	100	98.779	Macaca_fascicularis
ENSPCAG00000012617	FUBP1	100	98.779	ENSMMUG00000002899	FUBP1	100	98.779	Macaca_mulatta
ENSPCAG00000012617	FUBP1	100	98.779	ENSMNEG00000045212	FUBP1	100	98.779	Macaca_nemestrina
ENSPCAG00000012617	FUBP1	98	71.319	ENSMZEG00005024298	fubp1	70	78.337	Maylandia_zebra
ENSPCAG00000012617	FUBP1	92	96.860	ENSMGAG00000009424	FUBP1	99	96.860	Meleagris_gallopavo
ENSPCAG00000012617	FUBP1	100	98.176	ENSMAUG00000016428	Fubp1	100	98.176	Mesocricetus_auratus
ENSPCAG00000012617	FUBP1	100	98.174	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSPCAG00000012617	FUBP1	87	74.000	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSPCAG00000012617	FUBP1	94	90.723	ENSMODG00000020804	FUBP1	100	90.723	Monodelphis_domestica
ENSPCAG00000012617	FUBP1	98	70.597	ENSMALG00000015173	fubp1	70	76.805	Monopterus_albus
ENSPCAG00000012617	FUBP1	100	98.165	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.165	Mus_caroli
ENSPCAG00000012617	FUBP1	100	97.859	ENSMUSG00000028034	Fubp1	100	97.859	Mus_musculus
ENSPCAG00000012617	FUBP1	100	98.318	MGP_PahariEiJ_G0027191	Fubp1	100	98.318	Mus_pahari
ENSPCAG00000012617	FUBP1	100	98.012	MGP_SPRETEiJ_G0026693	Fubp1	100	98.012	Mus_spretus
ENSPCAG00000012617	FUBP1	98	94.918	ENSMLUG00000014802	FUBP1	99	94.918	Myotis_lucifugus
ENSPCAG00000012617	FUBP1	100	94.368	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSPCAG00000012617	FUBP1	98	68.012	ENSNBRG00000015099	fubp1	72	77.925	Neolamprologus_brichardi
ENSPCAG00000012617	FUBP1	100	94.977	ENSNLEG00000009772	FUBP1	100	94.977	Nomascus_leucogenys
ENSPCAG00000012617	FUBP1	91	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSPCAG00000012617	FUBP1	91	96.575	ENSOPRG00000001175	FUBP1	91	96.575	Ochotona_princeps
ENSPCAG00000012617	FUBP1	98	67.083	ENSODEG00000003657	-	99	66.303	Octodon_degus
ENSPCAG00000012617	FUBP1	100	99.084	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSPCAG00000012617	FUBP1	98	70.089	ENSONIG00000018381	fubp1	69	78.337	Oreochromis_niloticus
ENSPCAG00000012617	FUBP1	88	92.562	ENSOANG00000009777	FUBP1	99	92.397	Ornithorhynchus_anatinus
ENSPCAG00000012617	FUBP1	98	67.445	ENSORLG00000003540	fubp1	71	77.704	Oryzias_latipes
ENSPCAG00000012617	FUBP1	98	69.481	ENSORLG00020005908	fubp1	70	77.042	Oryzias_latipes_hni
ENSPCAG00000012617	FUBP1	98	70.717	ENSORLG00015008779	fubp1	70	77.042	Oryzias_latipes_hsok
ENSPCAG00000012617	FUBP1	98	68.202	ENSOMEG00000021943	fubp1	70	76.159	Oryzias_melastigma
ENSPCAG00000012617	FUBP1	98	95.224	ENSOGAG00000014233	FUBP1	99	95.224	Otolemur_garnettii
ENSPCAG00000012617	FUBP1	98	95.928	ENSOARG00000013259	FUBP1	99	95.777	Ovis_aries
ENSPCAG00000012617	FUBP1	100	99.084	ENSPPRG00000000413	FUBP1	100	99.084	Panthera_pardus
ENSPCAG00000012617	FUBP1	100	99.084	ENSPTIG00000019450	FUBP1	100	99.084	Panthera_tigris_altaica
ENSPCAG00000012617	FUBP1	93	96.072	ENSPSIG00000012965	FUBP1	99	96.791	Pelodiscus_sinensis
ENSPCAG00000012617	FUBP1	98	71.362	ENSPMGG00000009060	fubp1	71	76.688	Periophthalmus_magnuspinnatus
ENSPCAG00000012617	FUBP1	100	97.717	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSPCAG00000012617	FUBP1	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSPCAG00000012617	FUBP1	98	68.105	ENSPLAG00000021170	fubp1	72	78.337	Poecilia_latipinna
ENSPCAG00000012617	FUBP1	98	72.671	ENSPMEG00000004747	fubp1	73	78.337	Poecilia_mexicana
ENSPCAG00000012617	FUBP1	98	71.407	ENSPREG00000017911	fubp1	70	78.337	Poecilia_reticulata
ENSPCAG00000012617	FUBP1	70	99.134	ENSPPYG00000001219	-	70	99.134	Pongo_abelii
ENSPCAG00000012617	FUBP1	100	99.084	ENSPCOG00000024974	FUBP1	100	99.084	Propithecus_coquereli
ENSPCAG00000012617	FUBP1	100	94.656	ENSPVAG00000014637	FUBP1	100	94.656	Pteropus_vampyrus
ENSPCAG00000012617	FUBP1	98	71.319	ENSPNYG00000004552	fubp1	73	78.366	Pundamilia_nyererei
ENSPCAG00000012617	FUBP1	98	71.662	ENSPNAG00000016207	fubp1	87	77.174	Pygocentrus_nattereri
ENSPCAG00000012617	FUBP1	98	98.140	ENSRNOG00000043370	Fubp1	99	98.140	Rattus_norvegicus
ENSPCAG00000012617	FUBP1	98	99.067	ENSRBIG00000042950	FUBP1	99	99.067	Rhinopithecus_bieti
ENSPCAG00000012617	FUBP1	98	99.067	ENSRROG00000043534	FUBP1	99	99.067	Rhinopithecus_roxellana
ENSPCAG00000012617	FUBP1	100	98.779	ENSSBOG00000027299	FUBP1	100	98.779	Saimiri_boliviensis_boliviensis
ENSPCAG00000012617	FUBP1	94	97.577	ENSSHAG00000005367	FUBP1	100	97.577	Sarcophilus_harrisii
ENSPCAG00000012617	FUBP1	97	74.178	ENSSFOG00015010213	fubp1	70	79.121	Scleropages_formosus
ENSPCAG00000012617	FUBP1	98	69.880	ENSSDUG00000007383	fubp1	68	76.282	Seriola_dumerili
ENSPCAG00000012617	FUBP1	98	69.925	ENSSLDG00000022863	fubp1	72	76.703	Seriola_lalandi_dorsalis
ENSPCAG00000012617	FUBP1	100	96.774	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSPCAG00000012617	FUBP1	98	88.537	ENSSPUG00000008389	FUBP1	99	86.217	Sphenodon_punctatus
ENSPCAG00000012617	FUBP1	98	72.248	ENSSPAG00000010161	fubp1	69	77.704	Stegastes_partitus
ENSPCAG00000012617	FUBP1	92	96.223	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSPCAG00000012617	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSPCAG00000012617	FUBP1	100	98.931	ENSTTRG00000000096	FUBP1	100	98.931	Tursiops_truncatus
ENSPCAG00000012617	FUBP1	99	98.923	ENSVPAG00000004709	FUBP1	100	98.923	Vicugna_pacos
ENSPCAG00000012617	FUBP1	98	68.567	ENSXCOG00000019354	fubp1	72	76.805	Xiphophorus_couchianus
ENSPCAG00000012617	FUBP1	95	71.791	ENSXMAG00000007168	fubp1	73	78.118	Xiphophorus_maculatus