EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000012915 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 7336 bases
Position: chrGeneScaffold_2882:3064-10399
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012049	MBD	PF01429.19	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000012900	MBD4-201	1650	-	ENSPCAP00000012049	550 (aa)	-	UPI00018B0C07

Gene Model

Click here to download ENSPCAG00000012915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000012915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000012915	MBD4	99	71.429	ENSG00000129071	MBD4	89	92.949	Homo_sapiens
ENSPCAG00000012915	MBD4	57	52.459	ENSAPOG00000021668	mbd4	51	61.458	Acanthochromis_polyacanthus
ENSPCAG00000012915	MBD4	99	71.377	ENSAMEG00000004562	MBD4	95	71.377	Ailuropoda_melanoleuca
ENSPCAG00000012915	MBD4	58	52.326	ENSAOCG00000001157	mbd4	57	57.870	Amphiprion_ocellaris
ENSPCAG00000012915	MBD4	59	50.725	ENSAPEG00000016131	mbd4	53	60.500	Amphiprion_percula
ENSPCAG00000012915	MBD4	85	43.164	ENSACAG00000014733	MBD4	56	76.364	Anolis_carolinensis
ENSPCAG00000012915	MBD4	99	65.938	ENSBTAG00000021645	MBD4	95	65.938	Bos_taurus
ENSPCAG00000012915	MBD4	99	67.450	ENSCJAG00000017293	MBD4	95	67.450	Callithrix_jacchus
ENSPCAG00000012915	MBD4	99	70.705	ENSCAFG00000004867	MBD4	96	70.705	Canis_familiaris
ENSPCAG00000012915	MBD4	99	70.705	ENSCAFG00020007082	MBD4	96	70.705	Canis_lupus_dingo
ENSPCAG00000012915	MBD4	99	65.574	ENSCHIG00000009760	MBD4	95	65.574	Capra_hircus
ENSPCAG00000012915	MBD4	99	68.354	ENSCCAG00000029796	MBD4	95	68.354	Cebus_capucinus
ENSPCAG00000012915	MBD4	99	70.524	ENSCATG00000035211	MBD4	95	70.524	Cercocebus_atys
ENSPCAG00000012915	MBD4	92	66.732	ENSCLAG00000008974	MBD4	96	63.620	Chinchilla_lanigera
ENSPCAG00000012915	MBD4	99	70.524	ENSCSAG00000009037	MBD4	95	70.524	Chlorocebus_sabaeus
ENSPCAG00000012915	MBD4	95	47.601	ENSCPBG00000014704	MBD4	91	46.765	Chrysemys_picta_bellii
ENSPCAG00000012915	MBD4	99	70.886	ENSCANG00000007120	MBD4	95	70.886	Colobus_angolensis_palliatus
ENSPCAG00000012915	MBD4	99	60.949	ENSCGRG00001003507	Mbd4	96	61.496	Cricetulus_griseus_chok1gshd
ENSPCAG00000012915	MBD4	99	60.949	ENSCGRG00000010974	Mbd4	96	61.496	Cricetulus_griseus_crigri
ENSPCAG00000012915	MBD4	99	71.168	ENSDNOG00000049619	MBD4	96	71.168	Dasypus_novemcinctus
ENSPCAG00000012915	MBD4	84	60.944	ENSDORG00000000902	-	95	60.944	Dipodomys_ordii
ENSPCAG00000012915	MBD4	99	71.767	ENSEASG00005014800	MBD4	96	71.767	Equus_asinus_asinus
ENSPCAG00000012915	MBD4	99	71.767	ENSECAG00000022106	MBD4	96	71.767	Equus_caballus
ENSPCAG00000012915	MBD4	93	60.624	ENSEEUG00000011459	MBD4	95	60.624	Erinaceus_europaeus
ENSPCAG00000012915	MBD4	99	70.856	ENSFCAG00000000083	MBD4	95	70.856	Felis_catus
ENSPCAG00000012915	MBD4	81	41.578	ENSFALG00000013663	MBD4	95	41.116	Ficedula_albicollis
ENSPCAG00000012915	MBD4	85	40.000	ENSGMOG00000013830	mbd4	95	38.641	Gadus_morhua
ENSPCAG00000012915	MBD4	86	50.607	ENSGAGG00000018644	MBD4	85	49.393	Gopherus_agassizii
ENSPCAG00000012915	MBD4	99	70.344	ENSGGOG00000010698	MBD4	99	70.217	Gorilla_gorilla
ENSPCAG00000012915	MBD4	93	68.093	ENSHGLG00000009034	MBD4	90	68.093	Heterocephalus_glaber_female
ENSPCAG00000012915	MBD4	93	68.288	ENSHGLG00100000135	MBD4	90	68.288	Heterocephalus_glaber_male
ENSPCAG00000012915	MBD4	99	66.485	ENSSTOG00000020663	MBD4	96	66.485	Ictidomys_tridecemlineatus
ENSPCAG00000012915	MBD4	99	76.449	ENSLAFG00000010609	MBD4	96	76.449	Loxodonta_africana
ENSPCAG00000012915	MBD4	99	70.705	ENSMFAG00000002266	MBD4	95	70.705	Macaca_fascicularis
ENSPCAG00000012915	MBD4	99	70.397	ENSMMUG00000012723	MBD4	95	70.397	Macaca_mulatta
ENSPCAG00000012915	MBD4	99	70.652	ENSMNEG00000029752	MBD4	99	70.524	Macaca_nemestrina
ENSPCAG00000012915	MBD4	99	70.705	ENSMLEG00000024859	MBD4	95	70.705	Mandrillus_leucophaeus
ENSPCAG00000012915	MBD4	99	69.384	ENSMICG00000008022	MBD4	95	69.203	Microcebus_murinus
ENSPCAG00000012915	MBD4	70	43.846	ENSMOCG00000002466	-	96	43.846	Microtus_ochrogaster
ENSPCAG00000012915	MBD4	86	56.994	ENSMODG00000006399	-	95	56.994	Monodelphis_domestica
ENSPCAG00000012915	MBD4	99	61.455	MGP_CAROLIEiJ_G0028760	Mbd4	96	61.455	Mus_caroli
ENSPCAG00000012915	MBD4	99	60.182	ENSMUSG00000030322	Mbd4	95	60.000	Mus_musculus
ENSPCAG00000012915	MBD4	99	60.909	MGP_PahariEiJ_G0022511	-	96	60.909	Mus_pahari
ENSPCAG00000012915	MBD4	99	60.182	MGP_SPRETEiJ_G0029788	Mbd4	95	60.000	Mus_spretus
ENSPCAG00000012915	MBD4	99	69.746	ENSMPUG00000017195	MBD4	96	69.746	Mustela_putorius_furo
ENSPCAG00000012915	MBD4	93	74.708	ENSMLUG00000014766	MBD4	94	74.708	Myotis_lucifugus
ENSPCAG00000012915	MBD4	99	71.377	ENSNLEG00000005337	MBD4	95	71.377	Nomascus_leucogenys
ENSPCAG00000012915	MBD4	99	60.182	ENSOPRG00000000473	MBD4	95	59.710	Ochotona_princeps
ENSPCAG00000012915	MBD4	85	41.962	ENSONIG00000017212	mbd4	94	41.754	Oreochromis_niloticus
ENSPCAG00000012915	MBD4	70	45.088	ENSOANG00000004589	-	89	44.584	Ornithorhynchus_anatinus
ENSPCAG00000012915	MBD4	99	62.162	ENSOCUG00000013006	MBD4	95	61.802	Oryctolagus_cuniculus
ENSPCAG00000012915	MBD4	99	66.849	ENSOGAG00000010236	MBD4	95	66.849	Otolemur_garnettii
ENSPCAG00000012915	MBD4	99	65.756	ENSOARG00000014699	MBD4	95	65.756	Ovis_aries
ENSPCAG00000012915	MBD4	99	70.578	ENSPPAG00000036528	MBD4	95	70.578	Pan_paniscus
ENSPCAG00000012915	MBD4	99	69.217	ENSPPRG00000016480	MBD4	95	69.217	Panthera_pardus
ENSPCAG00000012915	MBD4	99	70.758	ENSPTRG00000015377	MBD4	95	70.758	Pan_troglodytes
ENSPCAG00000012915	MBD4	99	71.739	ENSPANG00000015047	MBD4	95	71.739	Papio_anubis
ENSPCAG00000012915	MBD4	52	73.750	ENSPKIG00000012306	MBD4	50	73.750	Paramormyrops_kingsleyae
ENSPCAG00000012915	MBD4	85	49.400	ENSPSIG00000007892	MBD4	84	49.203	Pelodiscus_sinensis
ENSPCAG00000012915	MBD4	94	57.361	ENSPEMG00000006226	Mbd4	97	57.524	Peromyscus_maniculatus_bairdii
ENSPCAG00000012915	MBD4	89	55.556	ENSPCIG00000002276	-	93	54.949	Phascolarctos_cinereus
ENSPCAG00000012915	MBD4	99	70.886	ENSPPYG00000013417	MBD4	95	70.886	Pongo_abelii
ENSPCAG00000012915	MBD4	99	73.684	ENSPVAG00000005238	MBD4	95	73.684	Pteropus_vampyrus
ENSPCAG00000012915	MBD4	99	59.783	ENSRNOG00000010919	Mbd4	96	59.239	Rattus_norvegicus
ENSPCAG00000012915	MBD4	99	70.705	ENSRBIG00000027722	MBD4	95	70.705	Rhinopithecus_bieti
ENSPCAG00000012915	MBD4	99	70.524	ENSRROG00000029136	MBD4	95	70.524	Rhinopithecus_roxellana
ENSPCAG00000012915	MBD4	99	68.659	ENSSBOG00000016810	MBD4	96	68.659	Saimiri_boliviensis_boliviensis
ENSPCAG00000012915	MBD4	93	53.846	ENSSHAG00000012953	MBD4	90	53.372	Sarcophilus_harrisii
ENSPCAG00000012915	MBD4	80	56.236	ENSSARG00000004496	-	76	56.236	Sorex_araneus
ENSPCAG00000012915	MBD4	85	51.020	ENSSPUG00000017344	MBD4	87	51.020	Sphenodon_punctatus
ENSPCAG00000012915	MBD4	99	71.091	ENSSSCG00000033303	MBD4	97	71.091	Sus_scrofa
ENSPCAG00000012915	MBD4	78	87.755	ENSTBEG00000003041	-	75	87.755	Tupaia_belangeri
ENSPCAG00000012915	MBD4	97	69.759	ENSTTRG00000011265	MBD4	96	69.759	Tursiops_truncatus
ENSPCAG00000012915	MBD4	86	72.899	ENSUAMG00000000814	MBD4	95	72.899	Ursus_americanus
ENSPCAG00000012915	MBD4	99	71.220	ENSUMAG00000017542	MBD4	96	71.220	Ursus_maritimus
ENSPCAG00000012915	MBD4	70	66.977	ENSVPAG00000004040	-	69	66.977	Vicugna_pacos
ENSPCAG00000012915	MBD4	99	70.705	ENSVVUG00000014222	MBD4	96	70.705	Vulpes_vulpes
ENSPCAG00000012915	MBD4	68	64.516	ENSXETG00000026622	mbd4	65	64.516	Xenopus_tropicalis