EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013053 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 8636 bases
Position: chrGeneScaffold_2779:6473-15108
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012187	RRM_1	PF00076.22	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013044	RBM42-201	1428	-	ENSPCAP00000012187	475 (aa)	-	UPI00018ADECF

Gene Model

Click here to download ENSPCAG00000013053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013053	RBM42	100	84.583	ENSG00000126254	RBM42	90	100.000	Homo_sapiens
ENSPCAG00000013053	RBM42	100	82.672	ENSAMEG00000000524	RBM42	100	84.551	Ailuropoda_melanoleuca
ENSPCAG00000013053	RBM42	50	80.460	ENSACAG00000005495	RBM42	93	60.227	Anolis_carolinensis
ENSPCAG00000013053	RBM42	100	82.390	ENSANAG00000027537	RBM42	100	92.308	Aotus_nancymaae
ENSPCAG00000013053	RBM42	100	82.390	ENSBTAG00000013440	RBM42	89	95.604	Bos_taurus
ENSPCAG00000013053	RBM42	88	93.407	ENSCJAG00000010220	RBM42	90	100.000	Callithrix_jacchus
ENSPCAG00000013053	RBM42	88	92.308	ENSCAFG00020018628	RBM42	95	100.000	Canis_lupus_dingo
ENSPCAG00000013053	RBM42	100	81.761	ENSCHIG00000009518	RBM42	100	83.438	Capra_hircus
ENSPCAG00000013053	RBM42	88	94.505	ENSTSYG00000014688	RBM42	100	94.505	Carlito_syrichta
ENSPCAG00000013053	RBM42	69	92.169	ENSCAPG00000009566	RBM42	86	94.578	Cavia_aperea
ENSPCAG00000013053	RBM42	98	81.838	ENSCPOG00000012365	RBM42	88	95.410	Cavia_porcellus
ENSPCAG00000013053	RBM42	100	84.696	ENSCCAG00000034440	RBM42	90	100.000	Cebus_capucinus
ENSPCAG00000013053	RBM42	100	82.292	ENSCATG00000041924	RBM42	90	100.000	Cercocebus_atys
ENSPCAG00000013053	RBM42	98	81.410	ENSCLAG00000012865	RBM42	88	95.082	Chinchilla_lanigera
ENSPCAG00000013053	RBM42	84	92.532	ENSCSAG00000004422	RBM42	88	95.738	Chlorocebus_sabaeus
ENSPCAG00000013053	RBM42	79	97.674	ENSCANG00000030272	RBM42	94	96.053	Colobus_angolensis_palliatus
ENSPCAG00000013053	RBM42	100	81.342	ENSCGRG00001018540	Rbm42	88	95.410	Cricetulus_griseus_chok1gshd
ENSPCAG00000013053	RBM42	100	83.542	ENSDNOG00000037397	RBM42	89	95.455	Dasypus_novemcinctus
ENSPCAG00000013053	RBM42	87	92.771	ENSDORG00000013001	Rbm42	88	95.738	Dipodomys_ordii
ENSPCAG00000013053	RBM42	71	95.652	ENSETEG00000007878	RBM42	71	96.429	Echinops_telfairi
ENSPCAG00000013053	RBM42	83	96.721	ENSEASG00005001074	RBM42	88	96.721	Equus_asinus_asinus
ENSPCAG00000013053	RBM42	83	96.721	ENSECAG00000018215	RBM42	88	96.721	Equus_caballus
ENSPCAG00000013053	RBM42	100	82.809	ENSFCAG00000006376	RBM42	90	100.000	Felis_catus
ENSPCAG00000013053	RBM42	98	79.149	ENSFDAG00000007440	RBM42	88	94.137	Fukomys_damarensis
ENSPCAG00000013053	RBM42	92	52.311	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSPCAG00000013053	RBM42	100	84.583	ENSGGOG00000009972	RBM42	90	100.000	Gorilla_gorilla
ENSPCAG00000013053	RBM42	98	78.419	ENSHGLG00000008418	RBM42	88	94.754	Heterocephalus_glaber_female
ENSPCAG00000013053	RBM42	98	78.419	ENSHGLG00100018667	RBM42	88	94.754	Heterocephalus_glaber_male
ENSPCAG00000013053	RBM42	100	81.761	ENSSTOG00000013050	RBM42	88	96.393	Ictidomys_tridecemlineatus
ENSPCAG00000013053	RBM42	100	81.342	ENSJJAG00000010421	Rbm42	87	95.738	Jaculus_jaculus
ENSPCAG00000013053	RBM42	98	80.300	ENSLAFG00000014993	RBM42	99	84.067	Loxodonta_africana
ENSPCAG00000013053	RBM42	100	82.292	ENSMFAG00000002758	RBM42	90	100.000	Macaca_fascicularis
ENSPCAG00000013053	RBM42	100	82.292	ENSMMUG00000018954	RBM42	90	100.000	Macaca_mulatta
ENSPCAG00000013053	RBM42	100	82.292	ENSMNEG00000030009	RBM42	90	100.000	Macaca_nemestrina
ENSPCAG00000013053	RBM42	100	82.292	ENSMLEG00000036119	RBM42	100	92.553	Mandrillus_leucophaeus
ENSPCAG00000013053	RBM42	100	85.325	ENSMICG00000009880	RBM42	90	100.000	Microcebus_murinus
ENSPCAG00000013053	RBM42	100	81.132	ENSMOCG00000000405	Rbm42	88	95.082	Microtus_ochrogaster
ENSPCAG00000013053	RBM42	77	96.629	ENSMODG00000013957	RBM42	73	86.095	Monodelphis_domestica
ENSPCAG00000013053	RBM42	100	83.857	MGP_CAROLIEiJ_G0029536	Rbm42	88	96.066	Mus_caroli
ENSPCAG00000013053	RBM42	100	83.857	ENSMUSG00000036733	Rbm42	88	96.066	Mus_musculus
ENSPCAG00000013053	RBM42	100	83.857	MGP_PahariEiJ_G0012770	Rbm42	88	96.393	Mus_pahari
ENSPCAG00000013053	RBM42	100	83.857	MGP_SPRETEiJ_G0030632	Rbm42	88	96.066	Mus_spretus
ENSPCAG00000013053	RBM42	84	94.505	ENSMPUG00000006288	RBM42	88	96.066	Mustela_putorius_furo
ENSPCAG00000013053	RBM42	100	84.067	ENSMLUG00000011334	RBM42	100	84.067	Myotis_lucifugus
ENSPCAG00000013053	RBM42	100	83.229	ENSNGAG00000019698	Rbm42	88	96.721	Nannospalax_galili
ENSPCAG00000013053	RBM42	69	93.072	ENSNLEG00000011272	-	94	88.796	Nomascus_leucogenys
ENSPCAG00000013053	RBM42	96	70.996	ENSMEUG00000016300	RBM42	88	86.136	Notamacropus_eugenii
ENSPCAG00000013053	RBM42	89	93.353	ENSOPRG00000001229	RBM42	89	93.353	Ochotona_princeps
ENSPCAG00000013053	RBM42	100	81.971	ENSODEG00000013705	RBM42	99	83.648	Octodon_degus
ENSPCAG00000013053	RBM42	84	93.160	ENSOCUG00000003337	RBM42	88	95.410	Oryctolagus_cuniculus
ENSPCAG00000013053	RBM42	100	83.857	ENSOGAG00000004144	RBM42	100	85.325	Otolemur_garnettii
ENSPCAG00000013053	RBM42	98	76.344	ENSOARG00000004926	RBM42	98	80.462	Ovis_aries
ENSPCAG00000013053	RBM42	100	84.696	ENSPPAG00000037315	RBM42	100	93.407	Pan_paniscus
ENSPCAG00000013053	RBM42	100	82.809	ENSPPRG00000016784	RBM42	90	100.000	Panthera_pardus
ENSPCAG00000013053	RBM42	88	94.505	ENSPTIG00000019270	RBM42	90	100.000	Panthera_tigris_altaica
ENSPCAG00000013053	RBM42	100	84.583	ENSPTRG00000010852	RBM42	90	100.000	Pan_troglodytes
ENSPCAG00000013053	RBM42	100	81.761	ENSPANG00000017032	RBM42	100	92.553	Papio_anubis
ENSPCAG00000013053	RBM42	100	84.067	ENSPEMG00000012065	Rbm42	88	96.721	Peromyscus_maniculatus_bairdii
ENSPCAG00000013053	RBM42	56	96.629	ENSPCIG00000015737	RBM42	88	88.424	Phascolarctos_cinereus
ENSPCAG00000013053	RBM42	100	83.711	ENSPPYG00000009871	RBM42	100	83.711	Pongo_abelii
ENSPCAG00000013053	RBM42	88	95.604	ENSPCOG00000026433	-	90	100.000	Propithecus_coquereli
ENSPCAG00000013053	RBM42	69	93.373	ENSPCOG00000020672	RBM42	81	96.084	Propithecus_coquereli
ENSPCAG00000013053	RBM42	100	82.600	ENSPVAG00000012815	RBM42	100	84.277	Pteropus_vampyrus
ENSPCAG00000013053	RBM42	100	84.277	ENSRNOG00000024278	Rbm42	88	97.049	Rattus_norvegicus
ENSPCAG00000013053	RBM42	100	82.292	ENSRBIG00000007566	RBM42	90	100.000	Rhinopithecus_bieti
ENSPCAG00000013053	RBM42	100	82.809	ENSRROG00000042313	RBM42	90	100.000	Rhinopithecus_roxellana
ENSPCAG00000013053	RBM42	79	89.583	ENSSBOG00000030666	RBM42	93	96.053	Saimiri_boliviensis_boliviensis
ENSPCAG00000013053	RBM42	98	58.511	ENSSHAG00000008876	RBM42	85	73.653	Sarcophilus_harrisii
ENSPCAG00000013053	RBM42	69	93.072	ENSSARG00000010724	RBM42	78	97.674	Sorex_araneus
ENSPCAG00000013053	RBM42	100	81.551	ENSSSCG00000002905	RBM42	93	95.724	Sus_scrofa
ENSPCAG00000013053	RBM42	100	82.809	ENSUAMG00000020711	RBM42	100	84.486	Ursus_americanus
ENSPCAG00000013053	RBM42	100	82.809	ENSUMAG00000020223	RBM42	100	84.486	Ursus_maritimus
ENSPCAG00000013053	RBM42	100	81.551	ENSVVUG00000015117	RBM42	88	96.721	Vulpes_vulpes