EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013328 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 18900 bases
Position: chrGeneScaffold_4762:154536-173435
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012433	PRP38	PF03371.15	1.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013308	PRPF38A-201	939	-	ENSPCAP00000012433	312 (aa)	-	UPI00018B0B3C

Gene Model

Click here to download ENSPCAG00000013328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013328	PRPF38A	100	99.359	ENSG00000134748	PRPF38A	100	99.359	Homo_sapiens
ENSPCAG00000013328	PRPF38A	71	89.140	ENSAPOG00000011652	prpf38a	100	82.109	Acanthochromis_polyacanthus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSAMEG00000009319	PRPF38A	100	99.359	Ailuropoda_melanoleuca
ENSPCAG00000013328	PRPF38A	71	86.878	ENSACIG00000012292	prpf38a	76	86.147	Amphilophus_citrinellus
ENSPCAG00000013328	PRPF38A	71	89.140	ENSAOCG00000018004	prpf38a	100	82.109	Amphiprion_ocellaris
ENSPCAG00000013328	PRPF38A	71	89.140	ENSAPEG00000021414	prpf38a	100	82.109	Amphiprion_percula
ENSPCAG00000013328	PRPF38A	71	88.688	ENSATEG00000004608	prpf38a	100	81.470	Anabas_testudineus
ENSPCAG00000013328	PRPF38A	79	97.166	ENSAPLG00000005827	PRPF38A	99	97.166	Anas_platyrhynchos
ENSPCAG00000013328	PRPF38A	100	95.833	ENSACAG00000008249	PRPF38A	100	95.833	Anolis_carolinensis
ENSPCAG00000013328	PRPF38A	100	99.359	ENSANAG00000027839	PRPF38A	100	99.359	Aotus_nancymaae
ENSPCAG00000013328	PRPF38A	100	67.405	ENSANAG00000029204	-	100	62.025	Aotus_nancymaae
ENSPCAG00000013328	PRPF38A	71	86.878	ENSACLG00000021595	prpf38a	100	80.511	Astatotilapia_calliptera
ENSPCAG00000013328	PRPF38A	100	82.109	ENSAMXG00000029274	prpf38a	100	82.109	Astyanax_mexicanus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSBTAG00000002720	PRPF38A	100	99.359	Bos_taurus
ENSPCAG00000013328	PRPF38A	63	63.077	WBGene00008380	prp-38	67	62.037	Caenorhabditis_elegans
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCJAG00000021594	PRPF38A	100	99.359	Callithrix_jacchus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCAFG00000003740	PRPF38A	100	99.359	Canis_familiaris
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCAFG00020010939	PRPF38A	100	99.359	Canis_lupus_dingo
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCHIG00000024730	PRPF38A	100	99.359	Capra_hircus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSTSYG00000009868	-	100	99.359	Carlito_syrichta
ENSPCAG00000013328	PRPF38A	86	98.141	ENSTSYG00000031994	-	95	98.141	Carlito_syrichta
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCPOG00000005079	PRPF38A	100	99.359	Cavia_porcellus
ENSPCAG00000013328	PRPF38A	100	99.038	ENSCCAG00000026502	PRPF38A	100	99.038	Cebus_capucinus
ENSPCAG00000013328	PRPF38A	100	64.423	ENSCATG00000044190	-	100	63.141	Cercocebus_atys
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCATG00000032296	PRPF38A	100	99.359	Cercocebus_atys
ENSPCAG00000013328	PRPF38A	100	99.359	ENSCLAG00000005816	PRPF38A	100	99.359	Chinchilla_lanigera
ENSPCAG00000013328	PRPF38A	78	96.875	ENSCHOG00000008388	PRPF38A	77	96.875	Choloepus_hoffmanni
ENSPCAG00000013328	PRPF38A	100	98.077	ENSCPBG00000014791	PRPF38A	100	98.077	Chrysemys_picta_bellii
ENSPCAG00000013328	PRPF38A	67	71.905	ENSCSAVG00000009580	-	78	66.102	Ciona_savignyi
ENSPCAG00000013328	PRPF38A	96	99.331	ENSCANG00000032608	PRPF38A	100	99.331	Colobus_angolensis_palliatus
ENSPCAG00000013328	PRPF38A	100	99.038	ENSCGRG00001018502	-	100	99.038	Cricetulus_griseus_chok1gshd
ENSPCAG00000013328	PRPF38A	74	83.983	ENSCGRG00001002557	-	78	83.983	Cricetulus_griseus_chok1gshd
ENSPCAG00000013328	PRPF38A	100	99.038	ENSCGRG00000014868	Prpf38a	100	99.038	Cricetulus_griseus_crigri
ENSPCAG00000013328	PRPF38A	71	88.235	ENSCSEG00000001269	prpf38a	79	87.446	Cynoglossus_semilaevis
ENSPCAG00000013328	PRPF38A	71	90.045	ENSCVAG00000012305	prpf38a	100	82.109	Cyprinodon_variegatus
ENSPCAG00000013328	PRPF38A	100	81.470	ENSDARG00000039213	prpf38a	100	81.470	Danio_rerio
ENSPCAG00000013328	PRPF38A	100	99.359	ENSDNOG00000042326	PRPF38A	100	99.359	Dasypus_novemcinctus
ENSPCAG00000013328	PRPF38A	100	85.897	ENSDORG00000023857	-	100	85.897	Dipodomys_ordii
ENSPCAG00000013328	PRPF38A	84	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSPCAG00000013328	PRPF38A	84	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSPCAG00000013328	PRPF38A	63	75.127	FBgn0050342	Prp38	57	76.064	Drosophila_melanogaster
ENSPCAG00000013328	PRPF38A	76	81.092	ENSEBUG00000012588	prpf38a	75	81.116	Eptatretus_burgeri
ENSPCAG00000013328	PRPF38A	100	99.359	ENSEASG00005014427	PRPF38A	100	99.359	Equus_asinus_asinus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSECAG00000022628	PRPF38A	100	99.359	Equus_caballus
ENSPCAG00000013328	PRPF38A	71	86.425	ENSELUG00000021094	prpf38a	100	80.192	Esox_lucius
ENSPCAG00000013328	PRPF38A	100	99.359	ENSFCAG00000002518	PRPF38A	100	99.359	Felis_catus
ENSPCAG00000013328	PRPF38A	87	96.679	ENSFALG00000005598	-	100	96.679	Ficedula_albicollis
ENSPCAG00000013328	PRPF38A	99	84.887	ENSFALG00000003612	-	77	90.043	Ficedula_albicollis
ENSPCAG00000013328	PRPF38A	100	99.038	ENSFDAG00000011287	PRPF38A	100	99.038	Fukomys_damarensis
ENSPCAG00000013328	PRPF38A	84	78.409	ENSFHEG00000014317	prpf38a	78	88.312	Fundulus_heteroclitus
ENSPCAG00000013328	PRPF38A	53	93.976	ENSGMOG00000011384	prpf38a	54	93.976	Gadus_morhua
ENSPCAG00000013328	PRPF38A	100	97.756	ENSGALG00000010627	PRPF38A	100	97.756	Gallus_gallus
ENSPCAG00000013328	PRPF38A	71	90.045	ENSGAFG00000012422	prpf38a	100	82.109	Gambusia_affinis
ENSPCAG00000013328	PRPF38A	71	86.996	ENSGACG00000005423	prpf38a	100	80.000	Gasterosteus_aculeatus
ENSPCAG00000013328	PRPF38A	100	98.397	ENSGAGG00000020547	PRPF38A	100	98.397	Gopherus_agassizii
ENSPCAG00000013328	PRPF38A	100	99.359	ENSGGOG00000003940	PRPF38A	100	99.359	Gorilla_gorilla
ENSPCAG00000013328	PRPF38A	61	91.534	ENSHBUG00000020572	prpf38a	80	91.489	Haplochromis_burtoni
ENSPCAG00000013328	PRPF38A	100	83.013	ENSHGLG00000007918	-	100	82.692	Heterocephalus_glaber_female
ENSPCAG00000013328	PRPF38A	100	99.359	ENSHGLG00000000475	PRPF38A	100	99.359	Heterocephalus_glaber_female
ENSPCAG00000013328	PRPF38A	100	99.359	ENSHGLG00100008935	PRPF38A	100	99.359	Heterocephalus_glaber_male
ENSPCAG00000013328	PRPF38A	100	83.013	ENSHGLG00100003928	-	100	82.692	Heterocephalus_glaber_male
ENSPCAG00000013328	PRPF38A	87	69.742	ENSHCOG00000020781	prpf38a	59	91.489	Hippocampus_comes
ENSPCAG00000013328	PRPF38A	74	87.069	ENSIPUG00000005757	prpf38a	75	87.069	Ictalurus_punctatus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSSTOG00000015610	PRPF38A	100	99.359	Ictidomys_tridecemlineatus
ENSPCAG00000013328	PRPF38A	100	98.077	ENSJJAG00000015811	Prpf38a	100	98.077	Jaculus_jaculus
ENSPCAG00000013328	PRPF38A	71	89.593	ENSKMAG00000006588	prpf38a	100	81.789	Kryptolebias_marmoratus
ENSPCAG00000013328	PRPF38A	96	79.866	ENSLBEG00000020585	prpf38a	100	80.192	Labrus_bergylta
ENSPCAG00000013328	PRPF38A	100	92.949	ENSLACG00000011495	PRPF38A	100	92.949	Latimeria_chalumnae
ENSPCAG00000013328	PRPF38A	100	80.511	ENSLOCG00000006262	prpf38a	100	81.789	Lepisosteus_oculatus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSLAFG00000025862	PRPF38A	100	99.359	Loxodonta_africana
ENSPCAG00000013328	PRPF38A	100	99.359	ENSMFAG00000039449	PRPF38A	100	99.359	Macaca_fascicularis
ENSPCAG00000013328	PRPF38A	87	98.529	ENSMMUG00000014333	PRPF38A	98	98.529	Macaca_mulatta
ENSPCAG00000013328	PRPF38A	100	99.359	ENSMNEG00000031221	PRPF38A	100	99.359	Macaca_nemestrina
ENSPCAG00000013328	PRPF38A	100	64.744	ENSMNEG00000040242	-	100	63.782	Macaca_nemestrina
ENSPCAG00000013328	PRPF38A	100	99.359	ENSMLEG00000041105	PRPF38A	100	99.359	Mandrillus_leucophaeus
ENSPCAG00000013328	PRPF38A	71	88.688	ENSMAMG00000015431	prpf38a	100	81.789	Mastacembelus_armatus
ENSPCAG00000013328	PRPF38A	71	86.878	ENSMZEG00005017838	prpf38a	100	80.511	Maylandia_zebra
ENSPCAG00000013328	PRPF38A	96	97.659	ENSMGAG00000011176	PRPF38A	100	97.659	Meleagris_gallopavo
ENSPCAG00000013328	PRPF38A	85	93.939	ENSMAUG00000018029	-	87	93.939	Mesocricetus_auratus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSMICG00000014193	PRPF38A	100	99.359	Microcebus_murinus
ENSPCAG00000013328	PRPF38A	100	99.038	ENSMOCG00000013080	Prpf38a	100	99.038	Microtus_ochrogaster
ENSPCAG00000013328	PRPF38A	83	81.783	ENSMMOG00000016972	prpf38a	81	87.446	Mola_mola
ENSPCAG00000013328	PRPF38A	100	97.764	ENSMODG00000000644	PRPF38A	100	97.764	Monodelphis_domestica
ENSPCAG00000013328	PRPF38A	71	88.688	ENSMALG00000019363	prpf38a	97	81.789	Monopterus_albus
ENSPCAG00000013328	PRPF38A	100	98.077	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.077	Mus_caroli
ENSPCAG00000013328	PRPF38A	100	98.077	ENSMUSG00000063800	Prpf38a	100	98.077	Mus_musculus
ENSPCAG00000013328	PRPF38A	100	98.077	MGP_PahariEiJ_G0028602	Prpf38a	100	98.077	Mus_pahari
ENSPCAG00000013328	PRPF38A	100	97.756	MGP_SPRETEiJ_G0027238	Prpf38a	100	97.756	Mus_spretus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSMPUG00000006896	PRPF38A	100	99.359	Mustela_putorius_furo
ENSPCAG00000013328	PRPF38A	100	99.038	ENSNGAG00000011884	Prpf38a	100	99.038	Nannospalax_galili
ENSPCAG00000013328	PRPF38A	71	85.520	ENSNBRG00000004013	prpf38a	74	84.848	Neolamprologus_brichardi
ENSPCAG00000013328	PRPF38A	93	99.308	ENSNLEG00000017999	PRPF38A	93	99.308	Nomascus_leucogenys
ENSPCAG00000013328	PRPF38A	100	67.308	ENSNLEG00000033398	-	94	67.308	Nomascus_leucogenys
ENSPCAG00000013328	PRPF38A	97	73.179	ENSNLEG00000012592	-	99	73.179	Nomascus_leucogenys
ENSPCAG00000013328	PRPF38A	100	94.231	ENSMEUG00000003860	PRPF38A	100	94.231	Notamacropus_eugenii
ENSPCAG00000013328	PRPF38A	77	98.750	ENSOPRG00000008985	PRPF38A	100	98.750	Ochotona_princeps
ENSPCAG00000013328	PRPF38A	100	99.359	ENSODEG00000005869	PRPF38A	100	99.359	Octodon_degus
ENSPCAG00000013328	PRPF38A	71	86.425	ENSONIG00000007816	prpf38a	100	80.192	Oreochromis_niloticus
ENSPCAG00000013328	PRPF38A	100	64.650	ENSOANG00000009541	-	100	64.650	Ornithorhynchus_anatinus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSOCUG00000000963	PRPF38A	100	99.359	Oryctolagus_cuniculus
ENSPCAG00000013328	PRPF38A	96	82.000	ENSORLG00000013485	prpf38a	99	82.051	Oryzias_latipes
ENSPCAG00000013328	PRPF38A	96	82.000	ENSORLG00020002130	prpf38a	99	82.051	Oryzias_latipes_hni
ENSPCAG00000013328	PRPF38A	96	81.667	ENSORLG00015021393	prpf38a	99	81.731	Oryzias_latipes_hsok
ENSPCAG00000013328	PRPF38A	96	81.544	ENSOMEG00000016333	prpf38a	100	81.470	Oryzias_melastigma
ENSPCAG00000013328	PRPF38A	100	99.359	ENSOGAG00000005423	PRPF38A	100	99.359	Otolemur_garnettii
ENSPCAG00000013328	PRPF38A	100	99.359	ENSOARG00000005373	PRPF38A	100	99.359	Ovis_aries
ENSPCAG00000013328	PRPF38A	100	77.244	ENSPPAG00000033867	-	100	77.244	Pan_paniscus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPPAG00000030905	PRPF38A	100	99.359	Pan_paniscus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPPRG00000013268	PRPF38A	100	99.359	Panthera_pardus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPTIG00000015419	PRPF38A	100	99.359	Panthera_tigris_altaica
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPTRG00000000739	PRPF38A	100	99.359	Pan_troglodytes
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPANG00000015483	PRPF38A	100	99.359	Papio_anubis
ENSPCAG00000013328	PRPF38A	100	79.167	ENSPKIG00000011439	prpf38a	100	80.449	Paramormyrops_kingsleyae
ENSPCAG00000013328	PRPF38A	100	97.756	ENSPSIG00000017487	PRPF38A	100	97.756	Pelodiscus_sinensis
ENSPCAG00000013328	PRPF38A	70	88.940	ENSPMGG00000021352	prpf38a	99	78.317	Periophthalmus_magnuspinnatus
ENSPCAG00000013328	PRPF38A	100	99.038	ENSPEMG00000023277	-	100	99.038	Peromyscus_maniculatus_bairdii
ENSPCAG00000013328	PRPF38A	100	92.063	ENSPEMG00000011212	-	100	91.429	Peromyscus_maniculatus_bairdii
ENSPCAG00000013328	PRPF38A	100	97.444	ENSPCIG00000022369	-	100	97.444	Phascolarctos_cinereus
ENSPCAG00000013328	PRPF38A	83	81.081	ENSPFOG00000004248	prpf38a	100	82.109	Poecilia_formosa
ENSPCAG00000013328	PRPF38A	92	76.451	ENSPLAG00000010328	prpf38a	100	82.109	Poecilia_latipinna
ENSPCAG00000013328	PRPF38A	84	78.947	ENSPMEG00000011804	prpf38a	100	82.109	Poecilia_mexicana
ENSPCAG00000013328	PRPF38A	95	73.333	ENSPREG00000002835	prpf38a	58	93.617	Poecilia_reticulata
ENSPCAG00000013328	PRPF38A	100	90.852	ENSPPYG00000001348	PRPF38A	100	90.852	Pongo_abelii
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPCOG00000016387	-	100	99.359	Propithecus_coquereli
ENSPCAG00000013328	PRPF38A	100	76.282	ENSPCOG00000020709	-	76	80.519	Propithecus_coquereli
ENSPCAG00000013328	PRPF38A	100	99.359	ENSPVAG00000009803	PRPF38A	100	99.359	Pteropus_vampyrus
ENSPCAG00000013328	PRPF38A	71	86.878	ENSPNYG00000005571	prpf38a	100	80.511	Pundamilia_nyererei
ENSPCAG00000013328	PRPF38A	100	82.748	ENSPNAG00000010399	prpf38a	100	82.748	Pygocentrus_nattereri
ENSPCAG00000013328	PRPF38A	100	98.718	ENSRNOG00000009451	Prpf38a	100	98.718	Rattus_norvegicus
ENSPCAG00000013328	PRPF38A	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSPCAG00000013328	PRPF38A	100	99.359	ENSRBIG00000036442	PRPF38A	100	99.359	Rhinopithecus_bieti
ENSPCAG00000013328	PRPF38A	100	99.359	ENSRROG00000032788	PRPF38A	100	99.359	Rhinopithecus_roxellana
ENSPCAG00000013328	PRPF38A	98	78.431	ENSRROG00000040003	-	99	78.431	Rhinopithecus_roxellana
ENSPCAG00000013328	PRPF38A	100	99.359	ENSSBOG00000019515	PRPF38A	100	99.359	Saimiri_boliviensis_boliviensis
ENSPCAG00000013328	PRPF38A	87	97.048	ENSSHAG00000006906	-	100	97.048	Sarcophilus_harrisii
ENSPCAG00000013328	PRPF38A	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSPCAG00000013328	PRPF38A	100	79.233	ENSSFOG00015013572	prpf38a	100	79.872	Scleropages_formosus
ENSPCAG00000013328	PRPF38A	71	88.235	ENSSMAG00000015379	prpf38a	75	87.446	Scophthalmus_maximus
ENSPCAG00000013328	PRPF38A	71	88.688	ENSSDUG00000001324	prpf38a	100	81.789	Seriola_dumerili
ENSPCAG00000013328	PRPF38A	71	88.688	ENSSLDG00000014803	prpf38a	100	81.789	Seriola_lalandi_dorsalis
ENSPCAG00000013328	PRPF38A	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSPCAG00000013328	PRPF38A	100	96.154	ENSSPUG00000013259	PRPF38A	100	96.154	Sphenodon_punctatus
ENSPCAG00000013328	PRPF38A	71	71.041	ENSSPAG00000010449	prpf38a	72	70.996	Stegastes_partitus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSSSCG00000028288	PRPF38A	100	99.359	Sus_scrofa
ENSPCAG00000013328	PRPF38A	100	93.590	ENSTGUG00000008995	PRPF38A	100	93.590	Taeniopygia_guttata
ENSPCAG00000013328	PRPF38A	71	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSPCAG00000013328	PRPF38A	71	86.547	ENSTNIG00000005533	prpf38a	100	80.000	Tetraodon_nigroviridis
ENSPCAG00000013328	PRPF38A	100	98.718	ENSTBEG00000000725	PRPF38A	100	98.718	Tupaia_belangeri
ENSPCAG00000013328	PRPF38A	100	99.359	ENSTTRG00000016139	PRPF38A	100	99.359	Tursiops_truncatus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSUAMG00000000625	PRPF38A	100	99.359	Ursus_americanus
ENSPCAG00000013328	PRPF38A	100	99.359	ENSUMAG00000022674	PRPF38A	100	99.359	Ursus_maritimus
ENSPCAG00000013328	PRPF38A	74	98.701	ENSVPAG00000000907	PRPF38A	100	93.590	Vicugna_pacos
ENSPCAG00000013328	PRPF38A	100	99.359	ENSVVUG00000004475	PRPF38A	100	99.359	Vulpes_vulpes
ENSPCAG00000013328	PRPF38A	100	84.665	ENSXETG00000008060	prpf38a	100	88.498	Xenopus_tropicalis
ENSPCAG00000013328	PRPF38A	71	87.892	ENSXCOG00000007393	prpf38a	77	87.124	Xiphophorus_couchianus
ENSPCAG00000013328	PRPF38A	71	90.045	ENSXMAG00000026143	prpf38a	100	82.109	Xiphophorus_maculatus