EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013462 (Gene tree)
Gene ID: -
Gene Symbol: TRMU
Alias: FLJ10140|MTO2|TRMT
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 22023 bases
Position: chrGeneScaffold_1211:10143-32165
Accession: 25481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012583	tRNA_Me_trans	PF03054.16	8.9e-106	1	2
ENSPCAP00000012583	tRNA_Me_trans	PF03054.16	8.9e-106	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013463	TRMU-201	1167	-	ENSPCAP00000012583	388 (aa)	-	UPI00018ADCE7

Gene Model

Click here to download ENSPCAG00000013462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013462	TRMU	100	78.261	ENSG00000100416	TRMU	95	88.000	Homo_sapiens
ENSPCAG00000013462	TRMU	99	62.887	ENSAPOG00000014458	trmu	93	62.887	Acanthochromis_polyacanthus
ENSPCAG00000013462	TRMU	100	79.949	ENSAMEG00000003319	TRMU	93	79.949	Ailuropoda_melanoleuca
ENSPCAG00000013462	TRMU	99	62.274	ENSACIG00000002101	trmu	93	62.274	Amphilophus_citrinellus
ENSPCAG00000013462	TRMU	99	63.402	ENSAOCG00000013155	trmu	93	63.402	Amphiprion_ocellaris
ENSPCAG00000013462	TRMU	99	63.144	ENSAPEG00000013350	trmu	93	63.144	Amphiprion_percula
ENSPCAG00000013462	TRMU	98	61.880	ENSATEG00000007814	trmu	93	61.880	Anabas_testudineus
ENSPCAG00000013462	TRMU	99	71.762	ENSAPLG00000016380	TRMU	98	71.762	Anas_platyrhynchos
ENSPCAG00000013462	TRMU	99	69.330	ENSACAG00000007720	TRMU	93	69.330	Anolis_carolinensis
ENSPCAG00000013462	TRMU	100	78.061	ENSANAG00000038053	TRMU	93	78.061	Aotus_nancymaae
ENSPCAG00000013462	TRMU	99	63.049	ENSACLG00000005395	trmu	93	63.049	Astatotilapia_calliptera
ENSPCAG00000013462	TRMU	99	61.558	ENSAMXG00000005282	trmu	92	61.558	Astyanax_mexicanus
ENSPCAG00000013462	TRMU	100	79.949	ENSBTAG00000005595	TRMU	93	79.949	Bos_taurus
ENSPCAG00000013462	TRMU	92	35.616	WBGene00007114	mttu-1	92	35.616	Caenorhabditis_elegans
ENSPCAG00000013462	TRMU	99	77.519	ENSCJAG00000000198	TRMU	92	77.519	Callithrix_jacchus
ENSPCAG00000013462	TRMU	99	80.260	ENSCAFG00000000779	TRMU	92	79.795	Canis_familiaris
ENSPCAG00000013462	TRMU	99	80.260	ENSCAFG00020009184	TRMU	92	79.795	Canis_lupus_dingo
ENSPCAG00000013462	TRMU	99	80.155	ENSCHIG00000017074	TRMU	93	80.155	Capra_hircus
ENSPCAG00000013462	TRMU	99	79.639	ENSTSYG00000003853	TRMU	92	79.639	Carlito_syrichta
ENSPCAG00000013462	TRMU	99	76.296	ENSCAPG00000013034	TRMU	96	76.296	Cavia_aperea
ENSPCAG00000013462	TRMU	99	79.328	ENSCPOG00000020780	TRMU	92	79.328	Cavia_porcellus
ENSPCAG00000013462	TRMU	99	79.587	ENSCCAG00000021641	TRMU	92	79.587	Cebus_capucinus
ENSPCAG00000013462	TRMU	99	78.351	ENSCATG00000032800	TRMU	92	78.351	Cercocebus_atys
ENSPCAG00000013462	TRMU	99	80.155	ENSCLAG00000017269	TRMU	92	80.155	Chinchilla_lanigera
ENSPCAG00000013462	TRMU	99	78.866	ENSCSAG00000005279	TRMU	92	78.866	Chlorocebus_sabaeus
ENSPCAG00000013462	TRMU	95	74.663	ENSCPBG00000011621	TRMU	93	74.663	Chrysemys_picta_bellii
ENSPCAG00000013462	TRMU	97	40.106	ENSCING00000019371	-	93	40.106	Ciona_intestinalis
ENSPCAG00000013462	TRMU	100	78.663	ENSCANG00000041645	TRMU	92	78.663	Colobus_angolensis_palliatus
ENSPCAG00000013462	TRMU	100	79.177	ENSCGRG00001001739	Trmu	93	79.177	Cricetulus_griseus_chok1gshd
ENSPCAG00000013462	TRMU	100	79.177	ENSCGRG00000002781	Trmu	93	79.177	Cricetulus_griseus_crigri
ENSPCAG00000013462	TRMU	97	63.032	ENSCSEG00000012382	trmu	90	63.032	Cynoglossus_semilaevis
ENSPCAG00000013462	TRMU	99	62.371	ENSCVAG00000001366	trmu	93	62.371	Cyprinodon_variegatus
ENSPCAG00000013462	TRMU	94	60.763	ENSDARG00000043734	trmu	88	60.763	Danio_rerio
ENSPCAG00000013462	TRMU	58	70.485	ENSDNOG00000047245	-	84	68.619	Dasypus_novemcinctus
ENSPCAG00000013462	TRMU	97	79.894	ENSDORG00000007455	Trmu	92	79.894	Dipodomys_ordii
ENSPCAG00000013462	TRMU	93	41.111	FBgn0040337	CG3021	89	41.111	Drosophila_melanogaster
ENSPCAG00000013462	TRMU	93	47.684	ENSEBUG00000007454	trmu	75	64.706	Eptatretus_burgeri
ENSPCAG00000013462	TRMU	98	80.315	ENSEASG00005021725	TRMU	92	79.639	Equus_asinus_asinus
ENSPCAG00000013462	TRMU	98	80.315	ENSECAG00000000467	TRMU	92	79.639	Equus_caballus
ENSPCAG00000013462	TRMU	76	59.122	ENSEEUG00000000074	-	71	59.122	Erinaceus_europaeus
ENSPCAG00000013462	TRMU	99	60.881	ENSELUG00000009464	trmu	93	60.881	Esox_lucius
ENSPCAG00000013462	TRMU	98	80.840	ENSFCAG00000006533	TRMU	92	80.155	Felis_catus
ENSPCAG00000013462	TRMU	99	69.543	ENSFALG00000010035	TRMU	99	69.543	Ficedula_albicollis
ENSPCAG00000013462	TRMU	100	79.177	ENSFDAG00000017472	TRMU	98	79.177	Fukomys_damarensis
ENSPCAG00000013462	TRMU	99	62.887	ENSFHEG00000003162	trmu	93	62.887	Fundulus_heteroclitus
ENSPCAG00000013462	TRMU	96	58.839	ENSGMOG00000001323	trmu	94	58.839	Gadus_morhua
ENSPCAG00000013462	TRMU	99	70.051	ENSGALG00000031922	TRMU	93	70.051	Gallus_gallus
ENSPCAG00000013462	TRMU	95	65.229	ENSGAFG00000013331	trmu	89	65.229	Gambusia_affinis
ENSPCAG00000013462	TRMU	95	61.702	ENSGACG00000019024	trmu	89	61.702	Gasterosteus_aculeatus
ENSPCAG00000013462	TRMU	100	78.005	ENSGGOG00000000203	TRMU	93	78.005	Gorilla_gorilla
ENSPCAG00000013462	TRMU	99	62.532	ENSHBUG00000023421	trmu	93	62.532	Haplochromis_burtoni
ENSPCAG00000013462	TRMU	99	78.351	ENSHGLG00000009278	TRMU	92	78.351	Heterocephalus_glaber_female
ENSPCAG00000013462	TRMU	99	78.351	ENSHGLG00100018863	TRMU	92	78.351	Heterocephalus_glaber_male
ENSPCAG00000013462	TRMU	95	64.499	ENSHCOG00000013459	trmu	89	64.499	Hippocampus_comes
ENSPCAG00000013462	TRMU	97	63.492	ENSIPUG00000009785	trmu	93	63.492	Ictalurus_punctatus
ENSPCAG00000013462	TRMU	100	81.425	ENSSTOG00000010993	TRMU	93	81.425	Ictidomys_tridecemlineatus
ENSPCAG00000013462	TRMU	100	78.920	ENSJJAG00000000667	Trmu	93	78.920	Jaculus_jaculus
ENSPCAG00000013462	TRMU	99	62.629	ENSKMAG00000008516	trmu	93	62.629	Kryptolebias_marmoratus
ENSPCAG00000013462	TRMU	99	62.371	ENSLBEG00000018831	trmu	93	62.371	Labrus_bergylta
ENSPCAG00000013462	TRMU	98	66.841	ENSLACG00000013713	TRMU	91	66.841	Latimeria_chalumnae
ENSPCAG00000013462	TRMU	99	64.286	ENSLOCG00000016066	trmu	93	64.286	Lepisosteus_oculatus
ENSPCAG00000013462	TRMU	100	72.821	ENSLAFG00000005129	TRMU	93	72.821	Loxodonta_africana
ENSPCAG00000013462	TRMU	99	78.866	ENSMFAG00000039767	TRMU	92	78.866	Macaca_fascicularis
ENSPCAG00000013462	TRMU	99	78.866	ENSMMUG00000000807	TRMU	92	78.866	Macaca_mulatta
ENSPCAG00000013462	TRMU	99	78.866	ENSMNEG00000028164	TRMU	92	78.866	Macaca_nemestrina
ENSPCAG00000013462	TRMU	99	78.351	ENSMLEG00000033884	TRMU	92	78.351	Mandrillus_leucophaeus
ENSPCAG00000013462	TRMU	97	62.599	ENSMAMG00000004717	trmu	91	62.599	Mastacembelus_armatus
ENSPCAG00000013462	TRMU	99	63.049	ENSMZEG00005015797	trmu	93	63.049	Maylandia_zebra
ENSPCAG00000013462	TRMU	86	67.449	ENSMGAG00000007550	TRMU	99	67.449	Meleagris_gallopavo
ENSPCAG00000013462	TRMU	100	78.920	ENSMAUG00000022282	Trmu	93	78.920	Mesocricetus_auratus
ENSPCAG00000013462	TRMU	99	79.534	ENSMICG00000029046	TRMU	93	79.534	Microcebus_murinus
ENSPCAG00000013462	TRMU	100	78.920	ENSMOCG00000014641	Trmu	93	78.920	Microtus_ochrogaster
ENSPCAG00000013462	TRMU	96	62.133	ENSMMOG00000007229	trmu	90	62.133	Mola_mola
ENSPCAG00000013462	TRMU	99	69.744	ENSMODG00000007433	TRMU	91	69.744	Monodelphis_domestica
ENSPCAG00000013462	TRMU	99	61.082	ENSMALG00000007721	trmu	93	61.082	Monopterus_albus
ENSPCAG00000013462	TRMU	99	77.577	MGP_CAROLIEiJ_G0020134	Trmu	88	86.000	Mus_caroli
ENSPCAG00000013462	TRMU	99	78.093	ENSMUSG00000022386	Trmu	86	86.000	Mus_musculus
ENSPCAG00000013462	TRMU	99	77.835	MGP_PahariEiJ_G0020139	Trmu	88	84.000	Mus_pahari
ENSPCAG00000013462	TRMU	99	78.093	MGP_SPRETEiJ_G0021031	Trmu	88	86.000	Mus_spretus
ENSPCAG00000013462	TRMU	99	79.381	ENSMPUG00000002523	TRMU	92	79.381	Mustela_putorius_furo
ENSPCAG00000013462	TRMU	99	79.740	ENSNGAG00000005132	Trmu	93	79.740	Nannospalax_galili
ENSPCAG00000013462	TRMU	99	62.791	ENSNBRG00000022690	trmu	93	63.492	Neolamprologus_brichardi
ENSPCAG00000013462	TRMU	100	77.494	ENSNLEG00000015773	TRMU	93	77.494	Nomascus_leucogenys
ENSPCAG00000013462	TRMU	78	58.609	ENSMEUG00000000216	TRMU	91	58.609	Notamacropus_eugenii
ENSPCAG00000013462	TRMU	99	78.351	ENSODEG00000014745	TRMU	93	77.635	Octodon_degus
ENSPCAG00000013462	TRMU	99	62.791	ENSONIG00000009821	trmu	93	62.791	Oreochromis_niloticus
ENSPCAG00000013462	TRMU	100	70.153	ENSOANG00000001891	TRMU	99	70.153	Ornithorhynchus_anatinus
ENSPCAG00000013462	TRMU	100	79.434	ENSOCUG00000003664	TRMU	93	79.434	Oryctolagus_cuniculus
ENSPCAG00000013462	TRMU	97	62.334	ENSORLG00000019015	trmu	91	62.334	Oryzias_latipes
ENSPCAG00000013462	TRMU	97	62.334	ENSORLG00020006830	trmu	91	62.334	Oryzias_latipes_hni
ENSPCAG00000013462	TRMU	97	62.334	ENSORLG00015003907	trmu	91	62.334	Oryzias_latipes_hsok
ENSPCAG00000013462	TRMU	62	56.846	ENSOMEG00000015541	trmu	87	56.846	Oryzias_melastigma
ENSPCAG00000013462	TRMU	100	78.406	ENSOGAG00000008096	TRMU	93	78.406	Otolemur_garnettii
ENSPCAG00000013462	TRMU	99	72.165	ENSOARG00000019475	TRMU	93	72.165	Ovis_aries
ENSPCAG00000013462	TRMU	100	78.261	ENSPPAG00000033944	TRMU	93	78.261	Pan_paniscus
ENSPCAG00000013462	TRMU	97	80.902	ENSPPRG00000004197	TRMU	92	80.155	Panthera_pardus
ENSPCAG00000013462	TRMU	59	91.266	ENSPTIG00000014122	TRMU	84	91.266	Panthera_tigris_altaica
ENSPCAG00000013462	TRMU	100	78.261	ENSPTRG00000014510	TRMU	93	78.261	Pan_troglodytes
ENSPCAG00000013462	TRMU	94	80.926	ENSPANG00000023074	TRMU	90	80.556	Papio_anubis
ENSPCAG00000013462	TRMU	99	62.113	ENSPKIG00000002849	trmu	93	62.113	Paramormyrops_kingsleyae
ENSPCAG00000013462	TRMU	95	72.629	ENSPSIG00000013020	TRMU	96	72.629	Pelodiscus_sinensis
ENSPCAG00000013462	TRMU	99	63.896	ENSPMGG00000004083	trmu	93	63.896	Periophthalmus_magnuspinnatus
ENSPCAG00000013462	TRMU	100	79.177	ENSPEMG00000014007	Trmu	93	79.177	Peromyscus_maniculatus_bairdii
ENSPCAG00000013462	TRMU	97	70.449	ENSPCIG00000009923	TRMU	91	69.409	Phascolarctos_cinereus
ENSPCAG00000013462	TRMU	99	63.660	ENSPFOG00000008197	trmu	87	63.660	Poecilia_formosa
ENSPCAG00000013462	TRMU	99	63.824	ENSPLAG00000008414	trmu	93	63.824	Poecilia_latipinna
ENSPCAG00000013462	TRMU	99	63.566	ENSPMEG00000004326	trmu	93	63.566	Poecilia_mexicana
ENSPCAG00000013462	TRMU	99	63.144	ENSPREG00000007980	trmu	93	63.144	Poecilia_reticulata
ENSPCAG00000013462	TRMU	100	78.005	ENSPPYG00000011949	TRMU	93	78.005	Pongo_abelii
ENSPCAG00000013462	TRMU	100	78.920	ENSPCOG00000016539	TRMU	93	78.920	Propithecus_coquereli
ENSPCAG00000013462	TRMU	97	89.125	ENSPVAG00000013202	TRMU	93	88.402	Pteropus_vampyrus
ENSPCAG00000013462	TRMU	99	62.532	ENSPNYG00000005629	trmu	93	62.532	Pundamilia_nyererei
ENSPCAG00000013462	TRMU	98	63.117	ENSPNAG00000006339	trmu	90	63.117	Pygocentrus_nattereri
ENSPCAG00000013462	TRMU	99	78.866	ENSRNOG00000016465	Trmu	93	78.866	Rattus_norvegicus
ENSPCAG00000013462	TRMU	99	78.093	ENSRBIG00000038973	TRMU	92	78.093	Rhinopithecus_bieti
ENSPCAG00000013462	TRMU	99	78.351	ENSRROG00000004267	TRMU	92	78.351	Rhinopithecus_roxellana
ENSPCAG00000013462	TRMU	99	78.295	ENSSBOG00000030184	TRMU	92	78.295	Saimiri_boliviensis_boliviensis
ENSPCAG00000013462	TRMU	97	62.533	ENSSFOG00015020664	trmu	99	62.533	Scleropages_formosus
ENSPCAG00000013462	TRMU	97	63.564	ENSSMAG00000019450	trmu	90	63.564	Scophthalmus_maximus
ENSPCAG00000013462	TRMU	100	62.982	ENSSDUG00000011913	trmu	93	62.982	Seriola_dumerili
ENSPCAG00000013462	TRMU	100	63.239	ENSSLDG00000011684	trmu	93	63.239	Seriola_lalandi_dorsalis
ENSPCAG00000013462	TRMU	95	64.595	ENSSPUG00000017123	TRMU	87	64.595	Sphenodon_punctatus
ENSPCAG00000013462	TRMU	100	62.468	ENSSPAG00000021875	trmu	93	62.468	Stegastes_partitus
ENSPCAG00000013462	TRMU	98	79.737	ENSSSCG00000000007	TRMU	93	78.772	Sus_scrofa
ENSPCAG00000013462	TRMU	95	71.774	ENSTGUG00000003663	-	99	71.774	Taeniopygia_guttata
ENSPCAG00000013462	TRMU	97	63.564	ENSTRUG00000001231	trmu	91	63.564	Takifugu_rubripes
ENSPCAG00000013462	TRMU	97	63.757	ENSTNIG00000010484	trmu	89	63.757	Tetraodon_nigroviridis
ENSPCAG00000013462	TRMU	100	62.982	ENSTBEG00000011276	-	99	62.982	Tupaia_belangeri
ENSPCAG00000013462	TRMU	99	80.612	ENSTTRG00000004160	TRMU	93	80.612	Tursiops_truncatus
ENSPCAG00000013462	TRMU	59	90.393	ENSUAMG00000024825	TRMU	76	90.393	Ursus_americanus
ENSPCAG00000013462	TRMU	100	67.526	ENSUMAG00000019079	TRMU	84	90.090	Ursus_maritimus
ENSPCAG00000013462	TRMU	56	78.082	ENSVPAG00000000685	-	100	78.082	Vicugna_pacos
ENSPCAG00000013462	TRMU	99	79.639	ENSVVUG00000024963	TRMU	92	79.639	Vulpes_vulpes
ENSPCAG00000013462	TRMU	98	68.146	ENSXETG00000023304	trmu	90	68.146	Xenopus_tropicalis
ENSPCAG00000013462	TRMU	99	62.371	ENSXCOG00000015105	trmu	92	62.371	Xiphophorus_couchianus
ENSPCAG00000013462	TRMU	99	62.887	ENSXMAG00000006697	trmu	93	62.887	Xiphophorus_maculatus