EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000013493 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 18456 bases
Position: chrGeneScaffold_4766:27616-46071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012568	RRM_1	PF00076.22	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013448	-	330	-	ENSPCAP00000012568	110 (aa)	-	UPI00018AE34D

Gene Model

Click here to download ENSPCAG00000013493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000013493	-	100	82.727	ENSPCAG00000015797	RBPMS2	62	82.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013493	-	100	98.182	ENSG00000157110	RBPMS	90	98.131	Homo_sapiens
ENSPCAG00000013493	-	100	90.000	ENSAPOG00000022304	RBPMS	57	90.000	Acanthochromis_polyacanthus
ENSPCAG00000013493	-	100	98.182	ENSAMEG00000001522	RBPMS	50	98.182	Ailuropoda_melanoleuca
ENSPCAG00000013493	-	100	90.000	ENSACIG00000011395	RBPMS	59	90.000	Amphilophus_citrinellus
ENSPCAG00000013493	-	100	90.000	ENSAOCG00000007731	RBPMS	57	90.000	Amphiprion_ocellaris
ENSPCAG00000013493	-	100	90.000	ENSAPEG00000023543	RBPMS	57	90.000	Amphiprion_percula
ENSPCAG00000013493	-	100	90.000	ENSATEG00000018184	RBPMS	57	90.000	Anabas_testudineus
ENSPCAG00000013493	-	100	95.495	ENSACAG00000003012	RBPMS	57	95.495	Anolis_carolinensis
ENSPCAG00000013493	-	100	98.182	ENSANAG00000028150	RBPMS	56	98.182	Aotus_nancymaae
ENSPCAG00000013493	-	100	90.000	ENSACLG00000002926	RBPMS	57	90.000	Astatotilapia_calliptera
ENSPCAG00000013493	-	100	88.182	ENSAMXG00000033491	rbpms	58	88.182	Astyanax_mexicanus
ENSPCAG00000013493	-	100	98.182	ENSBTAG00000033727	RBPMS	50	98.182	Bos_taurus
ENSPCAG00000013493	-	100	98.182	ENSCJAG00000012366	RBPMS	56	98.182	Callithrix_jacchus
ENSPCAG00000013493	-	100	98.182	ENSCAFG00000006503	RBPMS	50	98.182	Canis_familiaris
ENSPCAG00000013493	-	100	98.182	ENSCAFG00020001031	RBPMS	50	98.182	Canis_lupus_dingo
ENSPCAG00000013493	-	100	87.387	ENSCHIG00000027156	RBPMS	56	87.387	Capra_hircus
ENSPCAG00000013493	-	100	98.182	ENSTSYG00000013982	RBPMS	83	98.182	Carlito_syrichta
ENSPCAG00000013493	-	100	98.182	ENSCPOG00000038597	RBPMS	56	98.182	Cavia_porcellus
ENSPCAG00000013493	-	100	98.182	ENSCCAG00000033226	RBPMS	56	98.182	Cebus_capucinus
ENSPCAG00000013493	-	100	98.182	ENSCATG00000036486	RBPMS	56	98.182	Cercocebus_atys
ENSPCAG00000013493	-	100	98.182	ENSCLAG00000001518	RBPMS	63	98.182	Chinchilla_lanigera
ENSPCAG00000013493	-	100	98.182	ENSCSAG00000015838	RBPMS	50	98.182	Chlorocebus_sabaeus
ENSPCAG00000013493	-	100	98.182	ENSCHOG00000008745	RBPMS	56	98.182	Choloepus_hoffmanni
ENSPCAG00000013493	-	99	95.413	ENSCPBG00000013437	RBPMS	61	95.413	Chrysemys_picta_bellii
ENSPCAG00000013493	-	100	98.182	ENSCANG00000034997	RBPMS	63	98.182	Colobus_angolensis_palliatus
ENSPCAG00000013493	-	100	98.182	ENSCGRG00001002814	Rbpms	56	98.182	Cricetulus_griseus_chok1gshd
ENSPCAG00000013493	-	100	98.182	ENSCGRG00000006095	Rbpms	65	98.182	Cricetulus_griseus_crigri
ENSPCAG00000013493	-	100	90.000	ENSCSEG00000002777	rbpms	60	90.000	Cynoglossus_semilaevis
ENSPCAG00000013493	-	100	90.000	ENSCVAG00000013975	RBPMS	57	90.000	Cyprinodon_variegatus
ENSPCAG00000013493	-	96	73.585	ENSDARG00000099396	rbpms	63	73.585	Danio_rerio
ENSPCAG00000013493	-	100	98.182	ENSDNOG00000008126	RBPMS	50	98.182	Dasypus_novemcinctus
ENSPCAG00000013493	-	100	98.182	ENSETEG00000017582	RBPMS	50	98.182	Echinops_telfairi
ENSPCAG00000013493	-	100	98.182	ENSEASG00005016962	RBPMS	56	98.182	Equus_asinus_asinus
ENSPCAG00000013493	-	100	98.182	ENSECAG00000020735	RBPMS	56	98.182	Equus_caballus
ENSPCAG00000013493	-	100	91.818	ENSELUG00000009787	rbpms	57	91.818	Esox_lucius
ENSPCAG00000013493	-	93	69.608	ENSFCAG00000022292	-	55	69.608	Felis_catus
ENSPCAG00000013493	-	100	98.182	ENSFCAG00000025639	-	56	98.182	Felis_catus
ENSPCAG00000013493	-	100	98.182	ENSFDAG00000012078	RBPMS	65	98.182	Fukomys_damarensis
ENSPCAG00000013493	-	100	90.000	ENSFHEG00000000618	rbpms	57	90.000	Fundulus_heteroclitus
ENSPCAG00000013493	-	100	90.000	ENSGAFG00000016566	RBPMS	57	90.000	Gambusia_affinis
ENSPCAG00000013493	-	100	90.000	ENSGACG00000019471	rbpms	57	90.000	Gasterosteus_aculeatus
ENSPCAG00000013493	-	100	90.000	ENSHBUG00000005888	RBPMS	57	90.000	Haplochromis_burtoni
ENSPCAG00000013493	-	100	98.182	ENSHGLG00000002303	RBPMS	58	98.182	Heterocephalus_glaber_female
ENSPCAG00000013493	-	100	98.182	ENSHGLG00100008787	RBPMS	65	98.182	Heterocephalus_glaber_male
ENSPCAG00000013493	-	100	90.000	ENSHCOG00000005774	rbpms	57	90.000	Hippocampus_comes
ENSPCAG00000013493	-	99	88.991	ENSIPUG00000012459	RBPMS	57	88.991	Ictalurus_punctatus
ENSPCAG00000013493	-	100	98.182	ENSSTOG00000026546	RBPMS	56	98.182	Ictidomys_tridecemlineatus
ENSPCAG00000013493	-	100	99.091	ENSJJAG00000014024	Rbpms	56	99.091	Jaculus_jaculus
ENSPCAG00000013493	-	100	90.000	ENSKMAG00000006377	RBPMS	58	90.000	Kryptolebias_marmoratus
ENSPCAG00000013493	-	100	90.000	ENSLBEG00000027989	RBPMS	62	90.000	Labrus_bergylta
ENSPCAG00000013493	-	100	90.909	ENSLOCG00000013199	RBPMS	60	90.909	Lepisosteus_oculatus
ENSPCAG00000013493	-	100	98.182	ENSLAFG00000000209	RBPMS	50	98.182	Loxodonta_africana
ENSPCAG00000013493	-	100	98.182	ENSMFAG00000036911	RBPMS	56	98.182	Macaca_fascicularis
ENSPCAG00000013493	-	100	98.182	ENSMMUG00000000458	RBPMS	56	98.182	Macaca_mulatta
ENSPCAG00000013493	-	100	98.182	ENSMNEG00000043805	RBPMS	56	98.182	Macaca_nemestrina
ENSPCAG00000013493	-	100	98.182	ENSMLEG00000015635	RBPMS	63	98.182	Mandrillus_leucophaeus
ENSPCAG00000013493	-	100	90.000	ENSMAMG00000004604	RBPMS	58	90.000	Mastacembelus_armatus
ENSPCAG00000013493	-	100	90.000	ENSMZEG00005000698	RBPMS	64	90.000	Maylandia_zebra
ENSPCAG00000013493	-	100	98.182	ENSMGAG00000005088	RBPMS	56	98.182	Meleagris_gallopavo
ENSPCAG00000013493	-	100	98.182	ENSMAUG00000018892	Rbpms	56	98.182	Mesocricetus_auratus
ENSPCAG00000013493	-	100	98.182	ENSMICG00000001295	RBPMS	56	98.182	Microcebus_murinus
ENSPCAG00000013493	-	100	98.182	ENSMOCG00000014009	Rbpms	56	98.182	Microtus_ochrogaster
ENSPCAG00000013493	-	100	95.455	ENSMODG00000019006	RBPMS	52	95.455	Monodelphis_domestica
ENSPCAG00000013493	-	100	90.000	ENSMALG00000003261	RBPMS	59	90.000	Monopterus_albus
ENSPCAG00000013493	-	100	98.182	MGP_CAROLIEiJ_G0030970	Rbpms	58	98.182	Mus_caroli
ENSPCAG00000013493	-	100	98.182	ENSMUSG00000031586	Rbpms	69	98.182	Mus_musculus
ENSPCAG00000013493	-	100	98.182	MGP_PahariEiJ_G0021439	Rbpms	58	98.182	Mus_pahari
ENSPCAG00000013493	-	100	98.182	MGP_SPRETEiJ_G0032087	Rbpms	58	98.182	Mus_spretus
ENSPCAG00000013493	-	100	98.182	ENSMPUG00000011314	RBPMS	50	98.182	Mustela_putorius_furo
ENSPCAG00000013493	-	100	98.182	ENSMLUG00000009391	RBPMS	70	98.182	Myotis_lucifugus
ENSPCAG00000013493	-	100	98.182	ENSNGAG00000011141	Rbpms	50	98.182	Nannospalax_galili
ENSPCAG00000013493	-	100	90.000	ENSNBRG00000003313	RBPMS	61	90.000	Neolamprologus_brichardi
ENSPCAG00000013493	-	100	98.182	ENSNLEG00000036183	-	56	98.182	Nomascus_leucogenys
ENSPCAG00000013493	-	100	98.182	ENSOPRG00000013151	RBPMS	50	98.182	Ochotona_princeps
ENSPCAG00000013493	-	100	98.182	ENSODEG00000006700	RBPMS	56	98.182	Octodon_degus
ENSPCAG00000013493	-	100	90.000	ENSONIG00000007546	RBPMS	63	90.000	Oreochromis_niloticus
ENSPCAG00000013493	-	100	98.182	ENSOCUG00000008572	RBPMS	50	98.182	Oryctolagus_cuniculus
ENSPCAG00000013493	-	100	90.000	ENSORLG00000004135	-	57	90.000	Oryzias_latipes
ENSPCAG00000013493	-	100	90.000	ENSORLG00020016179	RBPMS	57	90.000	Oryzias_latipes_hni
ENSPCAG00000013493	-	100	90.000	ENSORLG00015013770	RBPMS	57	90.000	Oryzias_latipes_hsok
ENSPCAG00000013493	-	100	90.000	ENSOMEG00000005044	RBPMS	57	90.000	Oryzias_melastigma
ENSPCAG00000013493	-	100	98.182	ENSOARG00000010366	RBPMS	77	98.182	Ovis_aries
ENSPCAG00000013493	-	100	98.182	ENSPPAG00000033108	RBPMS	63	98.182	Pan_paniscus
ENSPCAG00000013493	-	100	98.182	ENSPPRG00000004836	RBPMS	56	98.182	Panthera_pardus
ENSPCAG00000013493	-	100	98.182	ENSPTIG00000015964	RBPMS	56	98.182	Panthera_tigris_altaica
ENSPCAG00000013493	-	100	98.182	ENSPTRG00000020135	RBPMS	56	98.182	Pan_troglodytes
ENSPCAG00000013493	-	100	98.182	ENSPANG00000008143	RBPMS	56	98.182	Papio_anubis
ENSPCAG00000013493	-	100	90.909	ENSPKIG00000004836	rbpms	58	90.909	Paramormyrops_kingsleyae
ENSPCAG00000013493	-	100	88.182	ENSPKIG00000000535	-	59	88.182	Paramormyrops_kingsleyae
ENSPCAG00000013493	-	99	95.413	ENSPSIG00000006136	RBPMS	62	95.413	Pelodiscus_sinensis
ENSPCAG00000013493	-	100	90.000	ENSPMGG00000018012	RBPMS	51	90.000	Periophthalmus_magnuspinnatus
ENSPCAG00000013493	-	100	99.091	ENSPEMG00000021130	Rbpms	58	99.091	Peromyscus_maniculatus_bairdii
ENSPCAG00000013493	-	100	90.000	ENSPFOG00000017158	RBPMS	57	90.000	Poecilia_formosa
ENSPCAG00000013493	-	100	90.000	ENSPLAG00000010767	RBPMS	57	90.000	Poecilia_latipinna
ENSPCAG00000013493	-	100	90.000	ENSPMEG00000009788	RBPMS	57	90.000	Poecilia_mexicana
ENSPCAG00000013493	-	100	90.000	ENSPREG00000016959	RBPMS	57	90.000	Poecilia_reticulata
ENSPCAG00000013493	-	100	98.182	ENSPPYG00000018487	RBPMS	65	98.182	Pongo_abelii
ENSPCAG00000013493	-	100	98.182	ENSPVAG00000001661	RBPMS	50	98.182	Pteropus_vampyrus
ENSPCAG00000013493	-	100	90.000	ENSPNYG00000001172	RBPMS	61	90.000	Pundamilia_nyererei
ENSPCAG00000013493	-	100	89.091	ENSPNAG00000029160	RBPMS	58	89.091	Pygocentrus_nattereri
ENSPCAG00000013493	-	100	98.182	ENSRNOG00000013328	Rbpms	53	98.182	Rattus_norvegicus
ENSPCAG00000013493	-	100	98.182	ENSRBIG00000038218	RBPMS	63	98.182	Rhinopithecus_bieti
ENSPCAG00000013493	-	100	98.182	ENSRROG00000042518	RBPMS	56	98.182	Rhinopithecus_roxellana
ENSPCAG00000013493	-	100	97.273	ENSSBOG00000026670	RBPMS	56	97.273	Saimiri_boliviensis_boliviensis
ENSPCAG00000013493	-	100	96.364	ENSSHAG00000010114	RBPMS	57	96.364	Sarcophilus_harrisii
ENSPCAG00000013493	-	100	90.000	ENSSFOG00015000417	rbpms	57	90.000	Scleropages_formosus
ENSPCAG00000013493	-	85	96.774	ENSSFOG00015017481	-	58	88.073	Scleropages_formosus
ENSPCAG00000013493	-	100	90.000	ENSSMAG00000010871	rbpms	57	90.000	Scophthalmus_maximus
ENSPCAG00000013493	-	100	90.000	ENSSDUG00000010894	RBPMS	57	90.000	Seriola_dumerili
ENSPCAG00000013493	-	100	90.000	ENSSLDG00000012916	RBPMS	57	90.000	Seriola_lalandi_dorsalis
ENSPCAG00000013493	-	100	97.273	ENSSARG00000000274	RBPMS	50	97.273	Sorex_araneus
ENSPCAG00000013493	-	100	90.000	ENSSPAG00000004777	rbpms	67	90.000	Stegastes_partitus
ENSPCAG00000013493	-	100	98.182	ENSSSCG00000015846	RBPMS	56	98.182	Sus_scrofa
ENSPCAG00000013493	-	100	97.273	ENSTGUG00000001776	RBPMS	58	97.273	Taeniopygia_guttata
ENSPCAG00000013493	-	100	90.000	ENSTRUG00000000041	RBPMS	57	90.000	Takifugu_rubripes
ENSPCAG00000013493	-	100	97.273	ENSTTRG00000012451	RBPMS	50	97.273	Tursiops_truncatus
ENSPCAG00000013493	-	100	98.182	ENSUAMG00000026353	RBPMS	72	98.182	Ursus_americanus
ENSPCAG00000013493	-	100	98.182	ENSUMAG00000007347	RBPMS	53	98.182	Ursus_maritimus
ENSPCAG00000013493	-	100	98.182	ENSVPAG00000010991	RBPMS	56	98.182	Vicugna_pacos
ENSPCAG00000013493	-	100	98.182	ENSVVUG00000019770	RBPMS	56	98.182	Vulpes_vulpes
ENSPCAG00000013493	-	99	94.495	ENSXETG00000011290	rbpms	63	94.495	Xenopus_tropicalis
ENSPCAG00000013493	-	100	80.000	ENSXCOG00000002436	RBPMS	56	80.000	Xiphophorus_couchianus
ENSPCAG00000013493	-	100	90.000	ENSXMAG00000027637	RBPMS	57	90.000	Xiphophorus_maculatus