EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013565 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 15517 bases
Position: chrGeneScaffold_7415:172415-187931
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012769	Anticodon_1	PF08264.13	8.3e-33	1	1
ENSPCAP00000012769	tRNA-synt_1	PF00133.22	1.5e-114	1	2
ENSPCAP00000012769	tRNA-synt_1	PF00133.22	1.5e-114	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013661	VARS-201	3789	-	ENSPCAP00000012769	1262 (aa)	-	UPI00018B04F4

Gene Model

Click here to download ENSPCAG00000013565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013565	VARS	86	92.639	ENSG00000204394	VARS	100	96.552	Homo_sapiens
ENSPCAG00000013565	VARS	84	66.729	ENSAPOG00000020691	vars	82	68.839	Acanthochromis_polyacanthus
ENSPCAG00000013565	VARS	84	66.729	ENSAPOG00000020921	vars	82	68.839	Acanthochromis_polyacanthus
ENSPCAG00000013565	VARS	86	92.280	ENSAMEG00000006417	VARS	86	92.280	Ailuropoda_melanoleuca
ENSPCAG00000013565	VARS	86	66.252	ENSACIG00000013752	vars	86	66.252	Amphilophus_citrinellus
ENSPCAG00000013565	VARS	86	66.075	ENSAOCG00000002447	vars	85	66.075	Amphiprion_ocellaris
ENSPCAG00000013565	VARS	86	65.897	ENSAPEG00000010638	vars	85	65.897	Amphiprion_percula
ENSPCAG00000013565	VARS	86	66.667	ENSATEG00000020219	vars	85	66.667	Anabas_testudineus
ENSPCAG00000013565	VARS	75	76.869	ENSACAG00000029133	-	84	76.869	Anolis_carolinensis
ENSPCAG00000013565	VARS	86	93.357	ENSANAG00000015453	VARS	86	93.357	Aotus_nancymaae
ENSPCAG00000013565	VARS	86	65.897	ENSACLG00000025699	vars	83	65.897	Astatotilapia_calliptera
ENSPCAG00000013565	VARS	80	71.633	ENSAMXG00000017716	vars	80	71.633	Astyanax_mexicanus
ENSPCAG00000013565	VARS	86	92.460	ENSBTAG00000005631	VARS	86	92.460	Bos_taurus
ENSPCAG00000013565	VARS	86	92.639	ENSCJAG00000002604	VARS	86	92.639	Callithrix_jacchus
ENSPCAG00000013565	VARS	86	92.280	ENSCAFG00000000636	VARS	86	92.280	Canis_familiaris
ENSPCAG00000013565	VARS	79	94.130	ENSCAFG00020020790	VARS	81	94.130	Canis_lupus_dingo
ENSPCAG00000013565	VARS	86	92.998	ENSCHIG00000011008	VARS	86	92.998	Capra_hircus
ENSPCAG00000013565	VARS	86	91.562	ENSTSYG00000001567	VARS	86	91.562	Carlito_syrichta
ENSPCAG00000013565	VARS	77	88.689	ENSCAPG00000013736	VARS	84	88.689	Cavia_aperea
ENSPCAG00000013565	VARS	86	88.869	ENSCPOG00000000870	VARS	86	88.869	Cavia_porcellus
ENSPCAG00000013565	VARS	86	92.639	ENSCCAG00000035656	VARS	100	92.537	Cebus_capucinus
ENSPCAG00000013565	VARS	86	92.280	ENSCATG00000022394	VARS	100	89.189	Cercocebus_atys
ENSPCAG00000013565	VARS	74	84.929	ENSCLAG00000009470	VARS	78	84.929	Chinchilla_lanigera
ENSPCAG00000013565	VARS	86	92.639	ENSCSAG00000008784	VARS	86	92.639	Chlorocebus_sabaeus
ENSPCAG00000013565	VARS	62	76.957	ENSCPBG00000007943	VARS	78	76.957	Chrysemys_picta_bellii
ENSPCAG00000013565	VARS	86	92.460	ENSCANG00000033570	VARS	86	92.460	Colobus_angolensis_palliatus
ENSPCAG00000013565	VARS	86	90.844	ENSCGRG00001005686	Vars	86	90.844	Cricetulus_griseus_chok1gshd
ENSPCAG00000013565	VARS	78	86.201	ENSCGRG00000013352	Vars	66	86.201	Cricetulus_griseus_crigri
ENSPCAG00000013565	VARS	85	65.054	ENSCSEG00000019652	vars	85	65.054	Cynoglossus_semilaevis
ENSPCAG00000013565	VARS	86	66.430	ENSCVAG00000022398	vars	86	66.430	Cyprinodon_variegatus
ENSPCAG00000013565	VARS	86	67.736	ENSDARG00000044575	vars	86	67.914	Danio_rerio
ENSPCAG00000013565	VARS	70	91.921	ENSDORG00000016433	Vars	79	91.921	Dipodomys_ordii
ENSPCAG00000013565	VARS	54	96.117	ENSETEG00000003824	VARS	61	96.117	Echinops_telfairi
ENSPCAG00000013565	VARS	86	92.998	ENSEASG00005015673	VARS	86	92.998	Equus_asinus_asinus
ENSPCAG00000013565	VARS	86	92.639	ENSECAG00000014620	VARS	86	92.639	Equus_caballus
ENSPCAG00000013565	VARS	67	93.421	ENSEEUG00000004116	VARS	66	93.421	Erinaceus_europaeus
ENSPCAG00000013565	VARS	86	65.542	ENSELUG00000006550	vars	84	65.542	Esox_lucius
ENSPCAG00000013565	VARS	86	92.460	ENSFCAG00000004510	VARS	86	92.460	Felis_catus
ENSPCAG00000013565	VARS	67	91.111	ENSFDAG00000011401	VARS	82	87.402	Fukomys_damarensis
ENSPCAG00000013565	VARS	86	67.318	ENSFHEG00000010672	vars	86	67.318	Fundulus_heteroclitus
ENSPCAG00000013565	VARS	78	66.430	ENSGMOG00000014908	vars	83	66.430	Gadus_morhua
ENSPCAG00000013565	VARS	86	67.140	ENSGAFG00000021630	vars	86	67.140	Gambusia_affinis
ENSPCAG00000013565	VARS	78	65.062	ENSGACG00000009601	vars	83	65.062	Gasterosteus_aculeatus
ENSPCAG00000013565	VARS	86	92.819	ENSGGOG00000011364	VARS	86	92.819	Gorilla_gorilla
ENSPCAG00000013565	VARS	86	65.897	ENSHBUG00000017151	vars	83	65.897	Haplochromis_burtoni
ENSPCAG00000013565	VARS	86	88.151	ENSHGLG00000011646	VARS	86	88.151	Heterocephalus_glaber_female
ENSPCAG00000013565	VARS	78	84.293	ENSHGLG00100018062	VARS	88	84.293	Heterocephalus_glaber_male
ENSPCAG00000013565	VARS	85	66.308	ENSHCOG00000012198	vars	86	66.129	Hippocampus_comes
ENSPCAG00000013565	VARS	86	67.794	ENSIPUG00000005218	vars	86	67.794	Ictalurus_punctatus
ENSPCAG00000013565	VARS	86	92.101	ENSSTOG00000013112	VARS	86	92.101	Ictidomys_tridecemlineatus
ENSPCAG00000013565	VARS	86	88.869	ENSJJAG00000019749	-	86	88.869	Jaculus_jaculus
ENSPCAG00000013565	VARS	86	72.890	ENSJJAG00000015343	-	85	72.890	Jaculus_jaculus
ENSPCAG00000013565	VARS	86	66.308	ENSKMAG00000009455	vars	86	66.308	Kryptolebias_marmoratus
ENSPCAG00000013565	VARS	86	65.591	ENSLBEG00000010341	vars	86	65.187	Labrus_bergylta
ENSPCAG00000013565	VARS	80	70.309	ENSLACG00000015232	VARS	84	70.309	Latimeria_chalumnae
ENSPCAG00000013565	VARS	86	69.355	ENSLOCG00000004240	vars	86	69.355	Lepisosteus_oculatus
ENSPCAG00000013565	VARS	86	93.896	ENSLAFG00000023090	VARS	86	93.896	Loxodonta_africana
ENSPCAG00000013565	VARS	86	92.460	ENSMFAG00000001032	VARS	86	92.460	Macaca_fascicularis
ENSPCAG00000013565	VARS	86	92.460	ENSMMUG00000006828	VARS	86	92.460	Macaca_mulatta
ENSPCAG00000013565	VARS	86	92.639	ENSMNEG00000042072	VARS	86	92.639	Macaca_nemestrina
ENSPCAG00000013565	VARS	86	92.280	ENSMLEG00000039307	VARS	86	92.280	Mandrillus_leucophaeus
ENSPCAG00000013565	VARS	86	66.369	ENSMAMG00000003949	vars	86	66.075	Mastacembelus_armatus
ENSPCAG00000013565	VARS	86	65.897	ENSMZEG00005018327	vars	85	65.771	Maylandia_zebra
ENSPCAG00000013565	VARS	86	89.767	ENSMAUG00000006715	Vars	86	89.767	Mesocricetus_auratus
ENSPCAG00000013565	VARS	86	91.741	ENSMICG00000003548	VARS	100	91.045	Microcebus_murinus
ENSPCAG00000013565	VARS	86	91.382	ENSMOCG00000015404	Vars	85	91.382	Microtus_ochrogaster
ENSPCAG00000013565	VARS	86	66.252	ENSMMOG00000015801	vars	85	66.252	Mola_mola
ENSPCAG00000013565	VARS	85	85.252	ENSMODG00000015204	-	85	85.252	Monodelphis_domestica
ENSPCAG00000013565	VARS	85	66.427	ENSMALG00000022532	vars	85	66.427	Monopterus_albus
ENSPCAG00000013565	VARS	86	92.101	MGP_CAROLIEiJ_G0021491	Vars	86	92.101	Mus_caroli
ENSPCAG00000013565	VARS	86	91.741	ENSMUSG00000007029	Vars	86	91.741	Mus_musculus
ENSPCAG00000013565	VARS	86	91.203	MGP_PahariEiJ_G0020486	Vars	86	91.203	Mus_pahari
ENSPCAG00000013565	VARS	86	91.921	MGP_SPRETEiJ_G0022396	Vars	86	91.921	Mus_spretus
ENSPCAG00000013565	VARS	86	92.819	ENSMPUG00000010821	VARS	86	92.819	Mustela_putorius_furo
ENSPCAG00000013565	VARS	64	93.929	ENSMLUG00000013126	VARS	82	93.929	Myotis_lucifugus
ENSPCAG00000013565	VARS	86	91.203	ENSNGAG00000012151	Vars	86	91.203	Nannospalax_galili
ENSPCAG00000013565	VARS	86	65.719	ENSNBRG00000020520	vars	86	65.719	Neolamprologus_brichardi
ENSPCAG00000013565	VARS	86	92.101	ENSNLEG00000006351	VARS	100	87.379	Nomascus_leucogenys
ENSPCAG00000013565	VARS	85	83.813	ENSMEUG00000011378	VARS	85	83.813	Notamacropus_eugenii
ENSPCAG00000013565	VARS	86	90.126	ENSOPRG00000003607	VARS	86	90.126	Ochotona_princeps
ENSPCAG00000013565	VARS	86	89.587	ENSODEG00000017681	VARS	86	89.587	Octodon_degus
ENSPCAG00000013565	VARS	86	66.075	ENSONIG00000013064	vars	85	66.075	Oreochromis_niloticus
ENSPCAG00000013565	VARS	63	82.576	ENSOANG00000005400	VARS	79	82.576	Ornithorhynchus_anatinus
ENSPCAG00000013565	VARS	86	91.203	ENSOCUG00000022463	VARS	86	91.203	Oryctolagus_cuniculus
ENSPCAG00000013565	VARS	86	66.785	ENSORLG00000013063	vars	86	66.785	Oryzias_latipes
ENSPCAG00000013565	VARS	86	67.140	ENSORLG00020003504	vars	86	67.140	Oryzias_latipes_hni
ENSPCAG00000013565	VARS	86	66.963	ENSORLG00015009001	vars	86	66.963	Oryzias_latipes_hsok
ENSPCAG00000013565	VARS	86	66.785	ENSOMEG00000015016	vars	86	66.785	Oryzias_melastigma
ENSPCAG00000013565	VARS	86	92.460	ENSOGAG00000007515	VARS	86	92.460	Otolemur_garnettii
ENSPCAG00000013565	VARS	86	92.998	ENSPPAG00000034012	VARS	86	92.998	Pan_paniscus
ENSPCAG00000013565	VARS	86	92.998	ENSPPRG00000014855	VARS	86	92.998	Panthera_pardus
ENSPCAG00000013565	VARS	71	94.541	ENSPTIG00000010462	VARS	79	94.409	Panthera_tigris_altaica
ENSPCAG00000013565	VARS	86	92.819	ENSPTRG00000017985	VARS	86	92.819	Pan_troglodytes
ENSPCAG00000013565	VARS	86	92.639	ENSPANG00000014565	VARS	86	92.639	Papio_anubis
ENSPCAG00000013565	VARS	86	66.607	ENSPKIG00000016304	vars	86	66.607	Paramormyrops_kingsleyae
ENSPCAG00000013565	VARS	86	65.419	ENSPMGG00000023909	vars	85	65.419	Periophthalmus_magnuspinnatus
ENSPCAG00000013565	VARS	86	91.203	ENSPEMG00000006639	Vars	86	91.203	Peromyscus_maniculatus_bairdii
ENSPCAG00000013565	VARS	85	84.532	ENSPCIG00000018553	VARS	85	84.532	Phascolarctos_cinereus
ENSPCAG00000013565	VARS	86	66.963	ENSPFOG00000015690	vars	86	66.963	Poecilia_formosa
ENSPCAG00000013565	VARS	86	66.963	ENSPLAG00000009590	vars	86	66.963	Poecilia_latipinna
ENSPCAG00000013565	VARS	86	66.963	ENSPMEG00000004708	vars	86	66.963	Poecilia_mexicana
ENSPCAG00000013565	VARS	86	67.140	ENSPREG00000013264	vars	85	67.140	Poecilia_reticulata
ENSPCAG00000013565	VARS	86	89.048	ENSPPYG00000016460	VARS	85	89.048	Pongo_abelii
ENSPCAG00000013565	VARS	86	93.357	ENSPCOG00000010942	VARS	86	93.357	Propithecus_coquereli
ENSPCAG00000013565	VARS	86	91.023	ENSPVAG00000012403	VARS	86	91.023	Pteropus_vampyrus
ENSPCAG00000013565	VARS	86	65.897	ENSPNYG00000022511	vars	86	65.897	Pundamilia_nyererei
ENSPCAG00000013565	VARS	86	68.149	ENSPNAG00000020962	vars	86	67.972	Pygocentrus_nattereri
ENSPCAG00000013565	VARS	86	91.562	ENSRNOG00000000867	Vars	86	91.562	Rattus_norvegicus
ENSPCAG00000013565	VARS	86	92.639	ENSRBIG00000041669	VARS	100	89.189	Rhinopithecus_bieti
ENSPCAG00000013565	VARS	86	92.639	ENSRROG00000045490	VARS	86	92.639	Rhinopithecus_roxellana
ENSPCAG00000013565	VARS	86	92.819	ENSSBOG00000035402	VARS	86	92.819	Saimiri_boliviensis_boliviensis
ENSPCAG00000013565	VARS	85	83.453	ENSSHAG00000006937	VARS	85	83.453	Sarcophilus_harrisii
ENSPCAG00000013565	VARS	86	66.901	ENSSFOG00015014272	vars	86	66.901	Scleropages_formosus
ENSPCAG00000013565	VARS	86	64.476	ENSSMAG00000009596	vars	86	64.476	Scophthalmus_maximus
ENSPCAG00000013565	VARS	86	66.252	ENSSDUG00000014177	vars	86	66.252	Seriola_dumerili
ENSPCAG00000013565	VARS	86	66.075	ENSSLDG00000025316	vars	86	66.075	Seriola_lalandi_dorsalis
ENSPCAG00000013565	VARS	86	65.295	ENSSPAG00000017068	vars	85	65.295	Stegastes_partitus
ENSPCAG00000013565	VARS	86	90.485	ENSSSCG00000038950	VARS	86	90.485	Sus_scrofa
ENSPCAG00000013565	VARS	68	73.952	ENSTRUG00000012307	vars	81	73.952	Takifugu_rubripes
ENSPCAG00000013565	VARS	86	65.071	ENSTNIG00000008011	vars	86	65.071	Tetraodon_nigroviridis
ENSPCAG00000013565	VARS	86	91.562	ENSTTRG00000014128	VARS	86	91.562	Tursiops_truncatus
ENSPCAG00000013565	VARS	86	91.637	ENSUAMG00000010424	VARS	87	91.637	Ursus_americanus
ENSPCAG00000013565	VARS	85	87.833	ENSUMAG00000013486	VARS	89	88.593	Ursus_maritimus
ENSPCAG00000013565	VARS	86	91.741	ENSVVUG00000021323	VARS	86	91.741	Vulpes_vulpes
ENSPCAG00000013565	VARS	81	65.889	ENSXETG00000024076	vars	83	65.889	Xenopus_tropicalis
ENSPCAG00000013565	VARS	86	66.252	ENSXCOG00000019172	vars	86	66.252	Xiphophorus_couchianus
ENSPCAG00000013565	VARS	86	66.430	ENSXMAG00000010927	vars	86	66.430	Xiphophorus_maculatus