EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013631 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 12690 bases
Position: chrGeneScaffold_575:56462-69151
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012746	KH_1	PF00013.29	1.6e-07	1	1
ENSPCAP00000012746	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013637	SF1-201	2016	-	ENSPCAP00000012746	671 (aa)	-	UPI00018AFC7D

Gene Model

Click here to download ENSPCAG00000013631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013631	SF1	75	68.421	ENSAPOG00000012341	sf1	61	75.346	Acanthochromis_polyacanthus
ENSPCAG00000013631	SF1	78	98.099	ENSAMEG00000017828	SF1	82	98.099	Ailuropoda_melanoleuca
ENSPCAG00000013631	SF1	75	67.969	ENSAOCG00000010934	sf1	59	76.777	Amphiprion_ocellaris
ENSPCAG00000013631	SF1	75	67.969	ENSAPEG00000009498	sf1	59	76.777	Amphiprion_percula
ENSPCAG00000013631	SF1	75	69.396	ENSATEG00000001894	sf1	60	77.069	Anabas_testudineus
ENSPCAG00000013631	SF1	80	98.885	ENSANAG00000026664	-	95	98.885	Aotus_nancymaae
ENSPCAG00000013631	SF1	77	87.016	ENSANAG00000022607	-	88	88.219	Aotus_nancymaae
ENSPCAG00000013631	SF1	61	77.197	ENSACLG00000007633	sf1	62	78.657	Astatotilapia_calliptera
ENSPCAG00000013631	SF1	75	70.841	ENSAMXG00000003630	sf1	56	69.684	Astyanax_mexicanus
ENSPCAG00000013631	SF1	78	97.909	ENSBTAG00000001035	SF1	82	97.909	Bos_taurus
ENSPCAG00000013631	SF1	80	99.257	ENSCJAG00000002780	SF1	91	95.631	Callithrix_jacchus
ENSPCAG00000013631	SF1	78	97.909	ENSCAFG00000014239	SF1	82	97.909	Canis_familiaris
ENSPCAG00000013631	SF1	78	97.909	ENSCAFG00020014381	SF1	82	97.909	Canis_lupus_dingo
ENSPCAG00000013631	SF1	80	99.257	ENSCHIG00000025867	SF1	98	99.257	Capra_hircus
ENSPCAG00000013631	SF1	66	98.409	ENSCAPG00000010762	SF1	79	98.409	Cavia_aperea
ENSPCAG00000013631	SF1	80	99.255	ENSCPOG00000012290	SF1	100	99.255	Cavia_porcellus
ENSPCAG00000013631	SF1	77	84.333	ENSCCAG00000023781	-	88	87.168	Cebus_capucinus
ENSPCAG00000013631	SF1	80	99.257	ENSCCAG00000037881	SF1	94	99.244	Cebus_capucinus
ENSPCAG00000013631	SF1	78	97.909	ENSCATG00000011564	SF1	95	98.316	Cercocebus_atys
ENSPCAG00000013631	SF1	80	99.257	ENSCSAG00000007258	SF1	98	99.257	Chlorocebus_sabaeus
ENSPCAG00000013631	SF1	82	81.917	ENSCHOG00000006008	SF1	88	87.420	Choloepus_hoffmanni
ENSPCAG00000013631	SF1	81	83.549	ENSCPBG00000023763	SF1	67	84.512	Chrysemys_picta_bellii
ENSPCAG00000013631	SF1	60	55.961	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSPCAG00000013631	SF1	76	53.448	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSPCAG00000013631	SF1	78	97.909	ENSCANG00000042201	SF1	88	99.187	Colobus_angolensis_palliatus
ENSPCAG00000013631	SF1	78	97.338	ENSCGRG00001003677	Sf1	82	97.338	Cricetulus_griseus_chok1gshd
ENSPCAG00000013631	SF1	80	98.510	ENSCGRG00000001708	Sf1	99	98.510	Cricetulus_griseus_crigri
ENSPCAG00000013631	SF1	79	65.741	ENSCSEG00000014375	sf1	58	75.529	Cynoglossus_semilaevis
ENSPCAG00000013631	SF1	75	68.297	ENSCVAG00000001670	sf1	63	78.922	Cyprinodon_variegatus
ENSPCAG00000013631	SF1	77	67.681	ENSDARG00000008188	sf1	70	77.804	Danio_rerio
ENSPCAG00000013631	SF1	80	98.885	ENSDNOG00000001282	SF1	98	98.885	Dasypus_novemcinctus
ENSPCAG00000013631	SF1	78	97.909	ENSDORG00000016334	Sf1	82	97.909	Dipodomys_ordii
ENSPCAG00000013631	SF1	78	89.905	ENSETEG00000012830	SF1	73	89.905	Echinops_telfairi
ENSPCAG00000013631	SF1	80	98.885	ENSEASG00005018272	SF1	98	98.885	Equus_asinus_asinus
ENSPCAG00000013631	SF1	80	99.071	ENSECAG00000024544	SF1	98	99.071	Equus_caballus
ENSPCAG00000013631	SF1	59	98.982	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSPCAG00000013631	SF1	75	67.843	ENSELUG00000013225	sf1	54	77.990	Esox_lucius
ENSPCAG00000013631	SF1	100	91.246	ENSFCAG00000012231	SF1	91	95.455	Felis_catus
ENSPCAG00000013631	SF1	77	96.124	ENSFDAG00000009833	SF1	79	98.409	Fukomys_damarensis
ENSPCAG00000013631	SF1	75	68.164	ENSFHEG00000022656	sf1	61	75.862	Fundulus_heteroclitus
ENSPCAG00000013631	SF1	75	69.201	ENSGAFG00000019284	sf1	78	78.554	Gambusia_affinis
ENSPCAG00000013631	SF1	56	80.000	ENSGACG00000000826	sf1	66	75.912	Gasterosteus_aculeatus
ENSPCAG00000013631	SF1	75	66.288	ENSHBUG00000011598	sf1	59	77.962	Haplochromis_burtoni
ENSPCAG00000013631	SF1	78	97.909	ENSHGLG00000009541	SF1	82	97.909	Heterocephalus_glaber_female
ENSPCAG00000013631	SF1	65	88.966	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSPCAG00000013631	SF1	73	96.545	ENSHGLG00100013879	-	93	94.129	Heterocephalus_glaber_male
ENSPCAG00000013631	SF1	67	86.481	ENSHGLG00100008255	-	92	86.052	Heterocephalus_glaber_male
ENSPCAG00000013631	SF1	78	97.905	ENSSTOG00000009790	-	84	97.905	Ictidomys_tridecemlineatus
ENSPCAG00000013631	SF1	78	87.786	ENSSTOG00000024353	-	78	87.786	Ictidomys_tridecemlineatus
ENSPCAG00000013631	SF1	78	97.719	ENSJJAG00000011788	Sf1	82	97.719	Jaculus_jaculus
ENSPCAG00000013631	SF1	75	67.823	ENSKMAG00000005854	sf1	69	71.706	Kryptolebias_marmoratus
ENSPCAG00000013631	SF1	75	68.350	ENSLBEG00000019836	sf1	50	86.585	Labrus_bergylta
ENSPCAG00000013631	SF1	61	78.795	ENSLACG00000018493	SF1	74	78.261	Latimeria_chalumnae
ENSPCAG00000013631	SF1	55	84.615	ENSLOCG00000002130	sf1	59	79.951	Lepisosteus_oculatus
ENSPCAG00000013631	SF1	78	98.289	ENSLAFG00000007201	SF1	82	98.289	Loxodonta_africana
ENSPCAG00000013631	SF1	78	97.909	ENSMFAG00000033122	SF1	94	98.316	Macaca_fascicularis
ENSPCAG00000013631	SF1	85	94.386	ENSMMUG00000022606	SF1	99	98.768	Macaca_mulatta
ENSPCAG00000013631	SF1	80	98.343	ENSMNEG00000037901	SF1	94	98.316	Macaca_nemestrina
ENSPCAG00000013631	SF1	79	97.180	ENSMLEG00000040706	SF1	94	98.316	Mandrillus_leucophaeus
ENSPCAG00000013631	SF1	75	68.544	ENSMAMG00000001780	sf1	66	70.062	Mastacembelus_armatus
ENSPCAG00000013631	SF1	75	66.098	ENSMZEG00005009196	sf1	59	77.725	Maylandia_zebra
ENSPCAG00000013631	SF1	78	97.338	ENSMAUG00000014064	Sf1	82	97.338	Mesocricetus_auratus
ENSPCAG00000013631	SF1	93	94.089	ENSMICG00000001202	SF1	94	98.995	Microcebus_murinus
ENSPCAG00000013631	SF1	78	97.148	ENSMOCG00000022038	Sf1	82	97.148	Microtus_ochrogaster
ENSPCAG00000013631	SF1	75	66.139	ENSMMOG00000020474	sf1	60	76.156	Mola_mola
ENSPCAG00000013631	SF1	66	94.170	ENSMODG00000029407	SF1	96	94.170	Monodelphis_domestica
ENSPCAG00000013631	SF1	55	83.243	ENSMALG00000020521	sf1	68	78.155	Monopterus_albus
ENSPCAG00000013631	SF1	80	98.699	MGP_CAROLIEiJ_G0022607	Sf1	100	99.251	Mus_caroli
ENSPCAG00000013631	SF1	80	98.699	ENSMUSG00000024949	Sf1	100	99.251	Mus_musculus
ENSPCAG00000013631	SF1	80	98.699	MGP_PahariEiJ_G0014101	Sf1	100	99.251	Mus_pahari
ENSPCAG00000013631	SF1	80	98.699	MGP_SPRETEiJ_G0023518	Sf1	100	99.251	Mus_spretus
ENSPCAG00000013631	SF1	78	97.719	ENSMPUG00000012684	SF1	82	97.719	Mustela_putorius_furo
ENSPCAG00000013631	SF1	80	89.219	ENSMLUG00000029800	-	76	94.595	Myotis_lucifugus
ENSPCAG00000013631	SF1	78	97.719	ENSMLUG00000015217	-	82	97.719	Myotis_lucifugus
ENSPCAG00000013631	SF1	78	97.719	ENSNGAG00000005550	Sf1	82	97.719	Nannospalax_galili
ENSPCAG00000013631	SF1	61	77.197	ENSNBRG00000017606	sf1	61	78.657	Neolamprologus_brichardi
ENSPCAG00000013631	SF1	78	97.909	ENSNLEG00000005236	-	88	99.187	Nomascus_leucogenys
ENSPCAG00000013631	SF1	79	97.928	ENSMEUG00000013424	SF1	100	97.928	Notamacropus_eugenii
ENSPCAG00000013631	SF1	74	98.788	ENSOPRG00000005008	SF1	100	98.788	Ochotona_princeps
ENSPCAG00000013631	SF1	68	96.937	ENSODEG00000006102	-	79	89.017	Octodon_degus
ENSPCAG00000013631	SF1	60	84.975	ENSOANG00000002909	SF1	96	87.468	Ornithorhynchus_anatinus
ENSPCAG00000013631	SF1	78	98.099	ENSOCUG00000026486	SF1	83	98.099	Oryctolagus_cuniculus
ENSPCAG00000013631	SF1	77	67.429	ENSORLG00000011853	sf1	58	76.499	Oryzias_latipes
ENSPCAG00000013631	SF1	77	67.619	ENSORLG00020011834	sf1	58	76.499	Oryzias_latipes_hni
ENSPCAG00000013631	SF1	75	67.054	ENSORLG00015012855	sf1	59	76.259	Oryzias_latipes_hsok
ENSPCAG00000013631	SF1	78	97.909	ENSOGAG00000016196	SF1	83	97.909	Otolemur_garnettii
ENSPCAG00000013631	SF1	77	94.659	ENSOARG00000009166	SF1	95	94.659	Ovis_aries
ENSPCAG00000013631	SF1	76	98.039	ENSPPAG00000002799	-	95	99.244	Pan_paniscus
ENSPCAG00000013631	SF1	87	97.607	ENSPPRG00000013566	SF1	86	97.607	Panthera_pardus
ENSPCAG00000013631	SF1	66	98.413	ENSPTIG00000016141	SF1	79	98.413	Panthera_tigris_altaica
ENSPCAG00000013631	SF1	80	99.257	ENSPTRG00000003846	SF1	97	99.279	Pan_troglodytes
ENSPCAG00000013631	SF1	80	99.257	ENSPANG00000020754	SF1	98	99.257	Papio_anubis
ENSPCAG00000013631	SF1	52	86.895	ENSPSIG00000003610	SF1	81	81.205	Pelodiscus_sinensis
ENSPCAG00000013631	SF1	78	97.338	ENSPEMG00000010463	Sf1	82	97.338	Peromyscus_maniculatus_bairdii
ENSPCAG00000013631	SF1	79	96.584	ENSPCIG00000018173	SF1	83	96.584	Phascolarctos_cinereus
ENSPCAG00000013631	SF1	75	68.885	ENSPFOG00000013683	sf1	66	80.440	Poecilia_formosa
ENSPCAG00000013631	SF1	55	83.598	ENSPLAG00000018076	sf1	61	78.947	Poecilia_latipinna
ENSPCAG00000013631	SF1	75	68.872	ENSPMEG00000005726	sf1	62	79.187	Poecilia_mexicana
ENSPCAG00000013631	SF1	75	68.689	ENSPREG00000004155	sf1	59	78.469	Poecilia_reticulata
ENSPCAG00000013631	SF1	77	99.420	ENSPPYG00000003098	-	98	99.420	Pongo_abelii
ENSPCAG00000013631	SF1	78	97.909	ENSPCOG00000027546	SF1	94	98.995	Propithecus_coquereli
ENSPCAG00000013631	SF1	100	93.027	ENSPVAG00000016938	SF1	91	94.156	Pteropus_vampyrus
ENSPCAG00000013631	SF1	75	66.667	ENSPNYG00000004673	sf1	59	77.725	Pundamilia_nyererei
ENSPCAG00000013631	SF1	75	70.270	ENSPNAG00000013072	sf1	68	69.838	Pygocentrus_nattereri
ENSPCAG00000013631	SF1	78	97.338	ENSRNOG00000021085	Sf1	94	98.723	Rattus_norvegicus
ENSPCAG00000013631	SF1	72	99.168	ENSRBIG00000042818	SF1	89	98.925	Rhinopithecus_bieti
ENSPCAG00000013631	SF1	78	99.425	ENSRROG00000045655	SF1	100	99.425	Rhinopithecus_roxellana
ENSPCAG00000013631	SF1	62	37.587	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSPCAG00000013631	SF1	77	78.143	ENSSBOG00000022267	-	97	80.788	Saimiri_boliviensis_boliviensis
ENSPCAG00000013631	SF1	59	93.267	ENSSHAG00000006841	SF1	73	93.516	Sarcophilus_harrisii
ENSPCAG00000013631	SF1	79	67.790	ENSSFOG00015021978	sf1	56	75.236	Scleropages_formosus
ENSPCAG00000013631	SF1	81	64.758	ENSSMAG00000007549	sf1	63	76.235	Scophthalmus_maximus
ENSPCAG00000013631	SF1	75	68.085	ENSSDUG00000003903	sf1	61	76.794	Seriola_dumerili
ENSPCAG00000013631	SF1	75	67.892	ENSSLDG00000013075	sf1	59	76.998	Seriola_lalandi_dorsalis
ENSPCAG00000013631	SF1	77	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSPCAG00000013631	SF1	78	80.407	ENSSPUG00000012907	SF1	86	80.998	Sphenodon_punctatus
ENSPCAG00000013631	SF1	75	67.248	ENSSPAG00000019060	sf1	58	76.755	Stegastes_partitus
ENSPCAG00000013631	SF1	80	99.257	ENSSSCG00000013021	SF1	98	99.257	Sus_scrofa
ENSPCAG00000013631	SF1	78	60.976	ENSTNIG00000004820	sf1	78	68.585	Tetraodon_nigroviridis
ENSPCAG00000013631	SF1	69	91.739	ENSTBEG00000013133	SF1	67	91.703	Tupaia_belangeri
ENSPCAG00000013631	SF1	80	94.972	ENSTTRG00000008857	SF1	100	94.972	Tursiops_truncatus
ENSPCAG00000013631	SF1	63	94.062	ENSUAMG00000011977	SF1	80	94.062	Ursus_americanus
ENSPCAG00000013631	SF1	68	99.345	ENSUMAG00000007268	SF1	88	99.344	Ursus_maritimus
ENSPCAG00000013631	SF1	53	99.203	ENSVPAG00000011912	SF1	66	99.203	Vicugna_pacos
ENSPCAG00000013631	SF1	80	99.257	ENSVVUG00000028585	SF1	98	99.257	Vulpes_vulpes
ENSPCAG00000013631	SF1	77	71.917	ENSXETG00000008434	sf1	68	81.509	Xenopus_tropicalis
ENSPCAG00000013631	SF1	54	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSPCAG00000013631	SF1	75	68.750	ENSXMAG00000007822	sf1	61	79.187	Xiphophorus_maculatus