EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013641 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 20329 bases
Position: chrGeneScaffold_1176:3479-23807
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012755	RtcB	PF01139.17	4.2e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013646	RTCB-201	1401	-	ENSPCAP00000012755	467 (aa)	-	UPI00018AEA75

Gene Model

Click here to download ENSPCAG00000013641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013641	RTCB	100	81.356	ENSG00000100220	RTCB	93	81.356	Homo_sapiens
ENSPCAG00000013641	RTCB	100	77.966	ENSAPOG00000006040	rtcb	93	77.966	Acanthochromis_polyacanthus
ENSPCAG00000013641	RTCB	100	81.144	ENSAMEG00000016152	RTCB	93	81.144	Ailuropoda_melanoleuca
ENSPCAG00000013641	RTCB	100	73.093	ENSACIG00000009083	rtcb	93	73.093	Amphilophus_citrinellus
ENSPCAG00000013641	RTCB	100	78.390	ENSAOCG00000005662	rtcb	93	78.390	Amphiprion_ocellaris
ENSPCAG00000013641	RTCB	100	78.390	ENSAPEG00000024701	rtcb	93	78.390	Amphiprion_percula
ENSPCAG00000013641	RTCB	96	76.432	ENSAPEG00000024653	rtcb	95	76.432	Amphiprion_percula
ENSPCAG00000013641	RTCB	100	78.390	ENSATEG00000000618	rtcb	93	78.390	Anabas_testudineus
ENSPCAG00000013641	RTCB	100	76.543	ENSACAG00000014817	RTCB	93	76.543	Anolis_carolinensis
ENSPCAG00000013641	RTCB	100	69.280	ENSANAG00000018191	-	85	69.280	Aotus_nancymaae
ENSPCAG00000013641	RTCB	100	76.695	ENSACLG00000008367	rtcb	93	76.695	Astatotilapia_calliptera
ENSPCAG00000013641	RTCB	100	77.966	ENSAMXG00000042320	rtcb	93	77.966	Astyanax_mexicanus
ENSPCAG00000013641	RTCB	100	80.932	ENSBTAG00000011070	RTCB	93	80.932	Bos_taurus
ENSPCAG00000013641	RTCB	100	59.023	WBGene00008877	rtcb-1	93	59.023	Caenorhabditis_elegans
ENSPCAG00000013641	RTCB	100	81.568	ENSCJAG00000006128	RTCB	93	81.568	Callithrix_jacchus
ENSPCAG00000013641	RTCB	100	81.144	ENSCAFG00000001785	RTCB	93	81.144	Canis_familiaris
ENSPCAG00000013641	RTCB	100	77.331	ENSCAFG00000010789	-	93	77.331	Canis_familiaris
ENSPCAG00000013641	RTCB	94	76.471	ENSCAFG00020018953	-	99	76.471	Canis_lupus_dingo
ENSPCAG00000013641	RTCB	100	81.144	ENSCAFG00020004890	-	93	81.144	Canis_lupus_dingo
ENSPCAG00000013641	RTCB	100	81.144	ENSCHIG00000027009	-	93	81.144	Capra_hircus
ENSPCAG00000013641	RTCB	100	81.780	ENSTSYG00000012320	RTCB	93	81.780	Carlito_syrichta
ENSPCAG00000013641	RTCB	94	79.730	ENSCAPG00000011647	RTCB	89	79.730	Cavia_aperea
ENSPCAG00000013641	RTCB	100	81.568	ENSCCAG00000000618	RTCB	93	81.568	Cebus_capucinus
ENSPCAG00000013641	RTCB	100	80.932	ENSCATG00000033424	RTCB	93	80.932	Cercocebus_atys
ENSPCAG00000013641	RTCB	100	80.932	ENSCLAG00000007997	RTCB	93	80.932	Chinchilla_lanigera
ENSPCAG00000013641	RTCB	100	81.144	ENSCSAG00000008351	RTCB	93	81.144	Chlorocebus_sabaeus
ENSPCAG00000013641	RTCB	76	90.265	ENSCHOG00000009123	RTCB	70	90.265	Choloepus_hoffmanni
ENSPCAG00000013641	RTCB	100	79.449	ENSCPBG00000023184	RTCB	93	79.449	Chrysemys_picta_bellii
ENSPCAG00000013641	RTCB	100	65.890	ENSCING00000003830	-	93	65.890	Ciona_intestinalis
ENSPCAG00000013641	RTCB	100	65.605	ENSCSAVG00000008124	-	92	65.605	Ciona_savignyi
ENSPCAG00000013641	RTCB	100	80.932	ENSCANG00000001891	RTCB	97	80.932	Colobus_angolensis_palliatus
ENSPCAG00000013641	RTCB	100	81.356	ENSCGRG00001011173	Rtcb	93	81.356	Cricetulus_griseus_chok1gshd
ENSPCAG00000013641	RTCB	93	80.137	ENSCGRG00000009587	-	89	80.137	Cricetulus_griseus_crigri
ENSPCAG00000013641	RTCB	100	77.331	ENSCSEG00000003986	rtcb	93	77.331	Cynoglossus_semilaevis
ENSPCAG00000013641	RTCB	86	76.658	ENSCVAG00000000569	rtcb	92	76.658	Cyprinodon_variegatus
ENSPCAG00000013641	RTCB	100	77.754	ENSDARG00000101047	rtcb	93	77.754	Danio_rerio
ENSPCAG00000013641	RTCB	86	76.039	ENSDNOG00000012425	RTCB	99	76.039	Dasypus_novemcinctus
ENSPCAG00000013641	RTCB	100	80.720	ENSDORG00000010855	Rtcb	93	80.720	Dipodomys_ordii
ENSPCAG00000013641	RTCB	99	70.213	FBgn0032781	RtcB	92	70.213	Drosophila_melanogaster
ENSPCAG00000013641	RTCB	100	74.153	ENSETEG00000001988	RTCB	93	74.153	Echinops_telfairi
ENSPCAG00000013641	RTCB	100	68.008	ENSEBUG00000014235	rtcb	93	68.008	Eptatretus_burgeri
ENSPCAG00000013641	RTCB	100	81.568	ENSEASG00005019059	RTCB	93	81.568	Equus_asinus_asinus
ENSPCAG00000013641	RTCB	100	81.568	ENSECAG00000023998	RTCB	93	81.568	Equus_caballus
ENSPCAG00000013641	RTCB	79	76.738	ENSEEUG00000006251	RTCB	83	76.738	Erinaceus_europaeus
ENSPCAG00000013641	RTCB	100	67.677	ENSELUG00000009275	rtcb	93	67.677	Esox_lucius
ENSPCAG00000013641	RTCB	100	81.356	ENSFCAG00000026480	RTCB	93	81.356	Felis_catus
ENSPCAG00000013641	RTCB	100	80.297	ENSFALG00000013334	RTCB	93	80.297	Ficedula_albicollis
ENSPCAG00000013641	RTCB	100	81.144	ENSFDAG00000018150	RTCB	93	81.144	Fukomys_damarensis
ENSPCAG00000013641	RTCB	100	77.542	ENSFHEG00000009595	rtcb	93	77.542	Fundulus_heteroclitus
ENSPCAG00000013641	RTCB	100	75.000	ENSGMOG00000018882	rtcb	93	75.000	Gadus_morhua
ENSPCAG00000013641	RTCB	100	80.085	ENSGALG00000012611	RTCB	93	80.085	Gallus_gallus
ENSPCAG00000013641	RTCB	100	77.754	ENSGAFG00000004198	rtcb	93	77.754	Gambusia_affinis
ENSPCAG00000013641	RTCB	100	77.331	ENSGACG00000000586	rtcb	93	77.331	Gasterosteus_aculeatus
ENSPCAG00000013641	RTCB	100	78.814	ENSGAGG00000019133	RTCB	98	78.814	Gopherus_agassizii
ENSPCAG00000013641	RTCB	100	81.356	ENSGGOG00000011402	RTCB	93	81.356	Gorilla_gorilla
ENSPCAG00000013641	RTCB	100	76.695	ENSHBUG00000020571	rtcb	93	76.695	Haplochromis_burtoni
ENSPCAG00000013641	RTCB	100	81.144	ENSHGLG00000004492	RTCB	93	81.144	Heterocephalus_glaber_female
ENSPCAG00000013641	RTCB	93	58.542	ENSHGLG00000001066	-	91	58.542	Heterocephalus_glaber_female
ENSPCAG00000013641	RTCB	100	81.144	ENSHGLG00100008965	RTCB	93	81.144	Heterocephalus_glaber_male
ENSPCAG00000013641	RTCB	100	75.738	ENSHCOG00000006450	rtcb	93	75.738	Hippocampus_comes
ENSPCAG00000013641	RTCB	100	77.966	ENSIPUG00000015443	rtcb	93	77.966	Ictalurus_punctatus
ENSPCAG00000013641	RTCB	100	81.356	ENSSTOG00000003878	RTCB	93	81.356	Ictidomys_tridecemlineatus
ENSPCAG00000013641	RTCB	100	81.144	ENSJJAG00000010667	Rtcb	93	81.144	Jaculus_jaculus
ENSPCAG00000013641	RTCB	100	77.542	ENSKMAG00000013178	rtcb	93	77.542	Kryptolebias_marmoratus
ENSPCAG00000013641	RTCB	100	77.754	ENSLBEG00000010566	RTCB	93	77.754	Labrus_bergylta
ENSPCAG00000013641	RTCB	100	77.119	ENSLBEG00000000214	rtcb	93	77.119	Labrus_bergylta
ENSPCAG00000013641	RTCB	100	78.602	ENSLACG00000013033	RTCB	93	78.602	Latimeria_chalumnae
ENSPCAG00000013641	RTCB	100	78.390	ENSLOCG00000016515	rtcb	93	78.390	Lepisosteus_oculatus
ENSPCAG00000013641	RTCB	100	82.415	ENSLAFG00000002082	RTCB	93	82.415	Loxodonta_africana
ENSPCAG00000013641	RTCB	100	81.144	ENSMFAG00000034419	RTCB	93	81.144	Macaca_fascicularis
ENSPCAG00000013641	RTCB	100	81.144	ENSMMUG00000006720	RTCB	93	81.144	Macaca_mulatta
ENSPCAG00000013641	RTCB	100	81.144	ENSMNEG00000040669	RTCB	93	81.144	Macaca_nemestrina
ENSPCAG00000013641	RTCB	100	80.932	ENSMLEG00000040505	RTCB	93	80.932	Mandrillus_leucophaeus
ENSPCAG00000013641	RTCB	100	77.542	ENSMAMG00000020676	rtcb	93	77.542	Mastacembelus_armatus
ENSPCAG00000013641	RTCB	100	76.695	ENSMZEG00005018942	rtcb	93	76.695	Maylandia_zebra
ENSPCAG00000013641	RTCB	100	79.747	ENSMGAG00000012805	RTCB	93	79.747	Meleagris_gallopavo
ENSPCAG00000013641	RTCB	100	69.444	ENSMICG00000036677	-	92	69.444	Microcebus_murinus
ENSPCAG00000013641	RTCB	100	81.568	ENSMICG00000013303	-	93	81.568	Microcebus_murinus
ENSPCAG00000013641	RTCB	100	81.356	ENSMOCG00000002440	Rtcb	93	81.356	Microtus_ochrogaster
ENSPCAG00000013641	RTCB	100	78.390	ENSMMOG00000005987	rtcb	93	78.390	Mola_mola
ENSPCAG00000013641	RTCB	100	80.508	ENSMODG00000001414	RTCB	93	80.508	Monodelphis_domestica
ENSPCAG00000013641	RTCB	100	77.966	ENSMALG00000007603	rtcb	93	77.966	Monopterus_albus
ENSPCAG00000013641	RTCB	100	81.780	MGP_CAROLIEiJ_G0015689	Rtcb	93	81.780	Mus_caroli
ENSPCAG00000013641	RTCB	100	81.780	ENSMUSG00000001783	Rtcb	93	81.780	Mus_musculus
ENSPCAG00000013641	RTCB	100	81.780	MGP_PahariEiJ_G0031396	Rtcb	93	81.780	Mus_pahari
ENSPCAG00000013641	RTCB	100	81.780	MGP_SPRETEiJ_G0016507	Rtcb	93	81.780	Mus_spretus
ENSPCAG00000013641	RTCB	100	81.144	ENSMPUG00000012285	RTCB	93	81.144	Mustela_putorius_furo
ENSPCAG00000013641	RTCB	100	79.536	ENSMLUG00000007803	RTCB	93	79.536	Myotis_lucifugus
ENSPCAG00000013641	RTCB	73	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSPCAG00000013641	RTCB	100	76.907	ENSNBRG00000017202	rtcb	93	76.907	Neolamprologus_brichardi
ENSPCAG00000013641	RTCB	100	81.356	ENSNLEG00000004960	RTCB	93	81.356	Nomascus_leucogenys
ENSPCAG00000013641	RTCB	81	100.000	ENSMEUG00000007809	-	75	100.000	Notamacropus_eugenii
ENSPCAG00000013641	RTCB	73	100.000	ENSOPRG00000003488	RTCB	73	100.000	Ochotona_princeps
ENSPCAG00000013641	RTCB	99	52.654	ENSODEG00000005042	-	91	52.654	Octodon_degus
ENSPCAG00000013641	RTCB	73	100.000	ENSODEG00000013033	-	91	100.000	Octodon_degus
ENSPCAG00000013641	RTCB	100	77.754	ENSONIG00000007474	rtcb	93	77.754	Oreochromis_niloticus
ENSPCAG00000013641	RTCB	100	80.085	ENSOANG00000005524	RTCB	93	80.085	Ornithorhynchus_anatinus
ENSPCAG00000013641	RTCB	100	81.356	ENSOCUG00000008270	RTCB	96	81.356	Oryctolagus_cuniculus
ENSPCAG00000013641	RTCB	100	77.119	ENSORLG00000020093	rtcb	93	77.119	Oryzias_latipes
ENSPCAG00000013641	RTCB	100	77.119	ENSORLG00020003706	rtcb	93	77.119	Oryzias_latipes_hni
ENSPCAG00000013641	RTCB	100	77.331	ENSORLG00015002968	rtcb	93	77.331	Oryzias_latipes_hsok
ENSPCAG00000013641	RTCB	100	76.907	ENSOMEG00000021278	rtcb	93	76.907	Oryzias_melastigma
ENSPCAG00000013641	RTCB	100	81.356	ENSOGAG00000001425	RTCB	93	81.356	Otolemur_garnettii
ENSPCAG00000013641	RTCB	100	81.144	ENSOARG00000018008	RTCB	93	81.144	Ovis_aries
ENSPCAG00000013641	RTCB	100	81.356	ENSPPAG00000028667	RTCB	93	81.356	Pan_paniscus
ENSPCAG00000013641	RTCB	100	81.356	ENSPPRG00000004038	RTCB	93	81.356	Panthera_pardus
ENSPCAG00000013641	RTCB	94	80.995	ENSPTIG00000020499	RTCB	90	80.995	Panthera_tigris_altaica
ENSPCAG00000013641	RTCB	100	81.356	ENSPTRG00000014287	RTCB	93	81.356	Pan_troglodytes
ENSPCAG00000013641	RTCB	100	81.144	ENSPANG00000016035	RTCB	93	81.144	Papio_anubis
ENSPCAG00000013641	RTCB	100	76.059	ENSPKIG00000001881	rtcb	93	76.059	Paramormyrops_kingsleyae
ENSPCAG00000013641	RTCB	90	78.689	ENSPSIG00000011690	RTCB	92	78.689	Pelodiscus_sinensis
ENSPCAG00000013641	RTCB	100	77.331	ENSPMGG00000016672	rtcb	93	77.331	Periophthalmus_magnuspinnatus
ENSPCAG00000013641	RTCB	100	81.780	ENSPEMG00000019548	Rtcb	93	81.780	Peromyscus_maniculatus_bairdii
ENSPCAG00000013641	RTCB	100	74.153	ENSPMAG00000005657	rtcb	93	74.153	Petromyzon_marinus
ENSPCAG00000013641	RTCB	100	80.508	ENSPCIG00000009467	RTCB	93	80.508	Phascolarctos_cinereus
ENSPCAG00000013641	RTCB	100	78.178	ENSPFOG00000003058	rtcb	93	78.178	Poecilia_formosa
ENSPCAG00000013641	RTCB	100	77.966	ENSPLAG00000017663	rtcb	93	77.966	Poecilia_latipinna
ENSPCAG00000013641	RTCB	100	78.178	ENSPMEG00000006227	rtcb	93	78.178	Poecilia_mexicana
ENSPCAG00000013641	RTCB	100	77.966	ENSPREG00000018467	rtcb	93	77.966	Poecilia_reticulata
ENSPCAG00000013641	RTCB	100	81.356	ENSPPYG00000011752	RTCB	93	81.356	Pongo_abelii
ENSPCAG00000013641	RTCB	100	81.356	ENSPCOG00000017243	RTCB	93	81.356	Propithecus_coquereli
ENSPCAG00000013641	RTCB	100	80.932	ENSPVAG00000002380	RTCB	100	80.932	Pteropus_vampyrus
ENSPCAG00000013641	RTCB	100	76.695	ENSPNYG00000022760	rtcb	93	76.695	Pundamilia_nyererei
ENSPCAG00000013641	RTCB	100	78.814	ENSPNAG00000009209	rtcb	93	78.814	Pygocentrus_nattereri
ENSPCAG00000013641	RTCB	100	81.780	ENSRNOG00000004813	Rtcb	93	81.780	Rattus_norvegicus
ENSPCAG00000013641	RTCB	100	71.670	ENSRBIG00000042090	RTCB	93	71.670	Rhinopithecus_bieti
ENSPCAG00000013641	RTCB	100	77.119	ENSSBOG00000020085	-	93	77.119	Saimiri_boliviensis_boliviensis
ENSPCAG00000013641	RTCB	93	80.045	ENSSHAG00000016277	RTCB	93	80.045	Sarcophilus_harrisii
ENSPCAG00000013641	RTCB	100	76.907	ENSSFOG00015000763	rtcb	93	76.907	Scleropages_formosus
ENSPCAG00000013641	RTCB	100	77.331	ENSSFOG00015011572	RTCB	93	77.331	Scleropages_formosus
ENSPCAG00000013641	RTCB	100	75.636	ENSSMAG00000005096	rtcb	93	73.729	Scophthalmus_maximus
ENSPCAG00000013641	RTCB	100	76.695	ENSSDUG00000012605	rtcb	93	76.695	Seriola_dumerili
ENSPCAG00000013641	RTCB	100	76.695	ENSSLDG00000019458	rtcb	93	76.695	Seriola_lalandi_dorsalis
ENSPCAG00000013641	RTCB	58	81.250	ENSSARG00000004799	-	57	81.250	Sorex_araneus
ENSPCAG00000013641	RTCB	100	78.178	ENSSPUG00000012814	RTCB	93	78.178	Sphenodon_punctatus
ENSPCAG00000013641	RTCB	100	78.390	ENSSPAG00000004623	rtcb	93	78.390	Stegastes_partitus
ENSPCAG00000013641	RTCB	100	81.356	ENSSSCG00000000158	RTCB	93	81.356	Sus_scrofa
ENSPCAG00000013641	RTCB	100	80.297	ENSTGUG00000010947	RTCB	93	80.297	Taeniopygia_guttata
ENSPCAG00000013641	RTCB	90	76.581	ENSTRUG00000009880	rtcb	99	92.727	Takifugu_rubripes
ENSPCAG00000013641	RTCB	100	77.119	ENSTNIG00000002484	rtcb	93	77.119	Tetraodon_nigroviridis
ENSPCAG00000013641	RTCB	100	67.161	ENSTBEG00000004418	RTCB	93	67.161	Tupaia_belangeri
ENSPCAG00000013641	RTCB	100	80.720	ENSTTRG00000006417	RTCB	100	80.720	Tursiops_truncatus
ENSPCAG00000013641	RTCB	100	81.144	ENSUAMG00000022792	RTCB	93	81.144	Ursus_americanus
ENSPCAG00000013641	RTCB	100	81.144	ENSUMAG00000017225	RTCB	93	81.144	Ursus_maritimus
ENSPCAG00000013641	RTCB	100	81.356	ENSVPAG00000005375	RTCB	93	81.356	Vicugna_pacos
ENSPCAG00000013641	RTCB	100	81.144	ENSVVUG00000023408	RTCB	93	81.144	Vulpes_vulpes
ENSPCAG00000013641	RTCB	100	77.754	ENSXETG00000011523	rtcb	93	77.754	Xenopus_tropicalis
ENSPCAG00000013641	RTCB	100	78.178	ENSXMAG00000002855	rtcb	93	78.178	Xiphophorus_maculatus