EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000013723 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 18067 bases
Position: chrGeneScaffold_4933:6641-24707
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000012841	Nop52	PF05997.12	1.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013737	RRP1B-201	2154	-	ENSPCAP00000012841	717 (aa)	-	UPI00018ADBCB

Gene Model

Click here to download ENSPCAG00000013723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013723's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000013723	RRP1B	91	83.158	ENSG00000160208	RRP1B	85	83.158	Homo_sapiens
ENSPCAG00000013723	RRP1B	62	84.211	ENSAMEG00000011401	RRP1B	85	84.211	Ailuropoda_melanoleuca
ENSPCAG00000013723	RRP1B	51	76.842	ENSAPLG00000004310	RRP1B	90	76.842	Anas_platyrhynchos
ENSPCAG00000013723	RRP1B	91	84.211	ENSANAG00000034889	RRP1B	85	84.211	Aotus_nancymaae
ENSPCAG00000013723	RRP1B	91	86.316	ENSBTAG00000017418	RRP1B	85	86.316	Bos_taurus
ENSPCAG00000013723	RRP1B	91	82.105	ENSCJAG00000017077	RRP1B	85	82.105	Callithrix_jacchus
ENSPCAG00000013723	RRP1B	91	84.211	ENSCAFG00000010621	RRP1B	89	84.211	Canis_familiaris
ENSPCAG00000013723	RRP1B	91	84.211	ENSCAFG00020018901	RRP1B	85	84.211	Canis_lupus_dingo
ENSPCAG00000013723	RRP1B	91	87.368	ENSCHIG00000021519	RRP1B	85	87.368	Capra_hircus
ENSPCAG00000013723	RRP1B	91	85.263	ENSCPOG00000002396	RRP1B	90	82.051	Cavia_porcellus
ENSPCAG00000013723	RRP1B	91	83.158	ENSCCAG00000029384	RRP1B	85	83.158	Cebus_capucinus
ENSPCAG00000013723	RRP1B	91	83.158	ENSCATG00000017423	RRP1B	85	83.158	Cercocebus_atys
ENSPCAG00000013723	RRP1B	91	87.368	ENSCLAG00000005622	RRP1B	85	87.368	Chinchilla_lanigera
ENSPCAG00000013723	RRP1B	91	83.158	ENSCSAG00000007961	RRP1B	85	83.158	Chlorocebus_sabaeus
ENSPCAG00000013723	RRP1B	91	82.105	ENSCPBG00000010310	RRP1B	89	82.105	Chrysemys_picta_bellii
ENSPCAG00000013723	RRP1B	91	84.211	ENSCANG00000040952	RRP1B	85	84.211	Colobus_angolensis_palliatus
ENSPCAG00000013723	RRP1B	91	84.211	ENSCGRG00001010889	-	85	84.211	Cricetulus_griseus_chok1gshd
ENSPCAG00000013723	RRP1B	91	84.211	ENSCGRG00001023882	-	85	84.211	Cricetulus_griseus_chok1gshd
ENSPCAG00000013723	RRP1B	91	84.211	ENSCGRG00000001553	Rrp1b	88	84.211	Cricetulus_griseus_crigri
ENSPCAG00000013723	RRP1B	91	82.105	ENSDNOG00000032774	RRP1B	85	82.105	Dasypus_novemcinctus
ENSPCAG00000013723	RRP1B	90	83.146	ENSDORG00000005496	Rrp1b	90	83.146	Dipodomys_ordii
ENSPCAG00000013723	RRP1B	91	82.105	ENSETEG00000019489	RRP1B	85	82.105	Echinops_telfairi
ENSPCAG00000013723	RRP1B	91	86.316	ENSEASG00005001687	RRP1B	85	86.316	Equus_asinus_asinus
ENSPCAG00000013723	RRP1B	91	87.368	ENSECAG00000018018	RRP1B	85	87.368	Equus_caballus
ENSPCAG00000013723	RRP1B	52	53.763	ENSELUG00000015885	-	62	53.763	Esox_lucius
ENSPCAG00000013723	RRP1B	91	85.263	ENSFCAG00000010272	RRP1B	85	85.263	Felis_catus
ENSPCAG00000013723	RRP1B	88	73.077	ENSFALG00000002024	RRP1B	90	73.077	Ficedula_albicollis
ENSPCAG00000013723	RRP1B	91	81.053	ENSFDAG00000010899	RRP1B	85	81.053	Fukomys_damarensis
ENSPCAG00000013723	RRP1B	62	50.538	ENSGACG00000001438	rrp1	55	50.538	Gasterosteus_aculeatus
ENSPCAG00000013723	RRP1B	91	82.105	ENSGAGG00000000375	RRP1B	85	82.105	Gopherus_agassizii
ENSPCAG00000013723	RRP1B	91	83.158	ENSGGOG00000012069	RRP1B	85	83.158	Gorilla_gorilla
ENSPCAG00000013723	RRP1B	91	83.158	ENSHGLG00000004968	RRP1B	85	83.158	Heterocephalus_glaber_female
ENSPCAG00000013723	RRP1B	70	81.944	ENSHGLG00100002232	RRP1B	88	81.944	Heterocephalus_glaber_male
ENSPCAG00000013723	RRP1B	54	44.275	ENSHCOG00000018388	-	51	42.484	Hippocampus_comes
ENSPCAG00000013723	RRP1B	91	85.263	ENSSTOG00000011790	RRP1B	82	85.263	Ictidomys_tridecemlineatus
ENSPCAG00000013723	RRP1B	91	63.725	ENSJJAG00000021279	Rrp1b	85	63.725	Jaculus_jaculus
ENSPCAG00000013723	RRP1B	56	59.140	ENSLOCG00000004064	-	58	59.140	Lepisosteus_oculatus
ENSPCAG00000013723	RRP1B	84	78.000	ENSLAFG00000000766	RRP1B	89	78.000	Loxodonta_africana
ENSPCAG00000013723	RRP1B	91	83.158	ENSMFAG00000039152	RRP1B	85	83.158	Macaca_fascicularis
ENSPCAG00000013723	RRP1B	91	83.158	ENSMMUG00000000104	RRP1B	85	83.158	Macaca_mulatta
ENSPCAG00000013723	RRP1B	91	83.158	ENSMNEG00000034269	RRP1B	85	83.158	Macaca_nemestrina
ENSPCAG00000013723	RRP1B	91	83.158	ENSMLEG00000040044	RRP1B	89	83.158	Mandrillus_leucophaeus
ENSPCAG00000013723	RRP1B	91	83.158	ENSMAUG00000021508	Rrp1b	84	83.158	Mesocricetus_auratus
ENSPCAG00000013723	RRP1B	91	86.316	ENSMICG00000004686	RRP1B	85	86.316	Microcebus_murinus
ENSPCAG00000013723	RRP1B	91	75.000	ENSMOCG00000001117	Rrp1b	85	75.000	Microtus_ochrogaster
ENSPCAG00000013723	RRP1B	91	82.105	ENSMODG00000021033	RRP1B	85	82.105	Monodelphis_domestica
ENSPCAG00000013723	RRP1B	90	81.915	MGP_CAROLIEiJ_G0021376	Rrp1b	85	81.915	Mus_caroli
ENSPCAG00000013723	RRP1B	90	82.979	ENSMUSG00000058392	Rrp1b	84	82.979	Mus_musculus
ENSPCAG00000013723	RRP1B	90	85.106	MGP_PahariEiJ_G0023695	Rrp1b	85	85.106	Mus_pahari
ENSPCAG00000013723	RRP1B	90	82.979	MGP_SPRETEiJ_G0022290	Rrp1b	84	82.979	Mus_spretus
ENSPCAG00000013723	RRP1B	80	80.769	ENSMPUG00000009810	RRP1B	89	80.769	Mustela_putorius_furo
ENSPCAG00000013723	RRP1B	91	86.316	ENSMLUG00000007738	RRP1B	85	86.316	Myotis_lucifugus
ENSPCAG00000013723	RRP1B	91	84.211	ENSNGAG00000021073	Rrp1b	85	84.211	Nannospalax_galili
ENSPCAG00000013723	RRP1B	91	83.158	ENSNLEG00000001490	RRP1B	85	83.158	Nomascus_leucogenys
ENSPCAG00000013723	RRP1B	71	80.000	ENSMEUG00000003226	-	80	80.000	Notamacropus_eugenii
ENSPCAG00000013723	RRP1B	91	81.053	ENSODEG00000013177	RRP1B	84	81.053	Octodon_degus
ENSPCAG00000013723	RRP1B	90	76.344	ENSOANG00000006470	RRP1B	85	76.344	Ornithorhynchus_anatinus
ENSPCAG00000013723	RRP1B	90	68.817	ENSOCUG00000025931	RRP1B	89	68.817	Oryctolagus_cuniculus
ENSPCAG00000013723	RRP1B	58	55.914	ENSOMEG00000016910	-	51	55.914	Oryzias_melastigma
ENSPCAG00000013723	RRP1B	69	83.158	ENSOGAG00000009872	RRP1B	65	83.158	Otolemur_garnettii
ENSPCAG00000013723	RRP1B	91	87.368	ENSOARG00000011314	RRP1B	90	87.368	Ovis_aries
ENSPCAG00000013723	RRP1B	91	83.158	ENSPPAG00000035319	RRP1B	89	83.158	Pan_paniscus
ENSPCAG00000013723	RRP1B	91	85.263	ENSPPRG00000010356	RRP1B	85	85.263	Panthera_pardus
ENSPCAG00000013723	RRP1B	65	85.263	ENSPTIG00000016894	RRP1B	78	85.263	Panthera_tigris_altaica
ENSPCAG00000013723	RRP1B	91	83.158	ENSPTRG00000013958	RRP1B	85	83.158	Pan_troglodytes
ENSPCAG00000013723	RRP1B	91	83.158	ENSPANG00000011090	RRP1B	85	83.158	Papio_anubis
ENSPCAG00000013723	RRP1B	54	81.053	ENSPSIG00000008152	RRP1B	81	81.053	Pelodiscus_sinensis
ENSPCAG00000013723	RRP1B	90	82.979	ENSPEMG00000022490	Rrp1b	85	82.979	Peromyscus_maniculatus_bairdii
ENSPCAG00000013723	RRP1B	91	80.000	ENSPCIG00000015513	RRP1B	85	80.000	Phascolarctos_cinereus
ENSPCAG00000013723	RRP1B	58	53.763	ENSPREG00000015673	-	51	53.763	Poecilia_reticulata
ENSPCAG00000013723	RRP1B	91	83.158	ENSPPYG00000011470	RRP1B	85	83.158	Pongo_abelii
ENSPCAG00000013723	RRP1B	91	85.263	ENSPCOG00000017927	RRP1B	85	85.263	Propithecus_coquereli
ENSPCAG00000013723	RRP1B	91	77.895	ENSPVAG00000001436	RRP1B	85	77.895	Pteropus_vampyrus
ENSPCAG00000013723	RRP1B	90	86.170	ENSRNOG00000001194	Rrp1b	85	86.170	Rattus_norvegicus
ENSPCAG00000013723	RRP1B	91	60.000	ENSRBIG00000041689	RRP1B	85	60.000	Rhinopithecus_bieti
ENSPCAG00000013723	RRP1B	91	83.158	ENSRROG00000031499	RRP1B	85	83.158	Rhinopithecus_roxellana
ENSPCAG00000013723	RRP1B	91	84.211	ENSSBOG00000034727	RRP1B	90	84.211	Saimiri_boliviensis_boliviensis
ENSPCAG00000013723	RRP1B	91	80.000	ENSSHAG00000017789	RRP1B	85	80.000	Sarcophilus_harrisii
ENSPCAG00000013723	RRP1B	61	52.688	ENSSMAG00000016847	-	55	52.688	Scophthalmus_maximus
ENSPCAG00000013723	RRP1B	61	76.842	ENSSARG00000003108	-	69	76.842	Sorex_araneus
ENSPCAG00000013723	RRP1B	91	77.895	ENSSSCG00000021698	RRP1B	89	77.895	Sus_scrofa
ENSPCAG00000013723	RRP1B	72	87.368	ENSTBEG00000000422	RRP1B	88	87.368	Tupaia_belangeri
ENSPCAG00000013723	RRP1B	91	84.211	ENSTTRG00000000723	RRP1B	85	84.211	Tursiops_truncatus
ENSPCAG00000013723	RRP1B	91	84.211	ENSUAMG00000026765	RRP1B	84	84.211	Ursus_americanus
ENSPCAG00000013723	RRP1B	56	84.211	ENSUMAG00000025510	RRP1B	77	84.211	Ursus_maritimus
ENSPCAG00000013723	RRP1B	91	84.211	ENSVVUG00000024509	RRP1B	89	84.211	Vulpes_vulpes